RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 PIM2Q9P1W9 311 aa18.16■□□□□ 0.5
CCHCR1-227ENST00000508852 SRP68Q9UHB9 627 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-227ENST00000508852 BCS1LQ9Y276 419 aa18.16■□□□□ 0.5
CCHCR1-227ENST00000508852 BRCA1P38398 1863 aaKnown RBP18.16■□□□□ 0.5
CCHCR1-227ENST00000508852 ARFGEF1Q9Y6D6 1849 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 NEFMP07197 916 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 PPP2R1AP30153 589 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 PRKAR2BP31323 418 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 USPL1Q5W0Q7 1092 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 IL17REQ8NFR9 667 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 RSPH6AQ9H0K4 717 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 CEMIPQ8WUJ3 1361 aa18.15■□□□□ 0.5
CCHCR1-227ENST00000508852 HTATSF1O43719 755 aaKnown RBP18.14■□□□□ 0.49
CCHCR1-227ENST00000508852 U2AF1L5P0DN76 240 aaPredicted RBP18.14■□□□□ 0.49
CCHCR1-227ENST00000508852 DPEP1P16444 411 aa18.14■□□□□ 0.49
CCHCR1-227ENST00000508852 U2AF1Q01081 240 aaKnown RBP eCLIP18.14■□□□□ 0.49
CCHCR1-227ENST00000508852 HEG1Q9ULI3 1381 aa18.14■□□□□ 0.49
CCHCR1-227ENST00000508852 POLRMTO00411 1230 aaKnown RBP18.13■□□□□ 0.49
CCHCR1-227ENST00000508852 ZBTB1Q9Y2K1 713 aa18.13■□□□□ 0.49
CCHCR1-227ENST00000508852 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
CCHCR1-227ENST00000508852 BTBD11A6QL63 1104 aa18.12■□□□□ 0.49
CCHCR1-227ENST00000508852 DALRD3Q5D0E6 543 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-227ENST00000508852 PNNQ9H307 717 aaKnown RBP18.12■□□□□ 0.49
CCHCR1-227ENST00000508852 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-227ENST00000508852 EIF5P55010 431 aaKnown RBP18.11■□□□□ 0.49
CCHCR1-227ENST00000508852 DDR1Q08345 913 aa18.11■□□□□ 0.49
CCHCR1-227ENST00000508852 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
CCHCR1-227ENST00000508852 ZNF496Q96IT1 587 aaPredicted RBP18.11■□□□□ 0.49
CCHCR1-227ENST00000508852 WWC3Q9ULE0 1092 aa18.11■□□□□ 0.49
CCHCR1-227ENST00000508852 PDZRN3Q9UPQ7 1066 aa18.11■□□□□ 0.49
CCHCR1-227ENST00000508852 IL6STP40189 918 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-227ENST00000508852 PHACTR3Q96KR7 559 aa18.1■□□□□ 0.49
CCHCR1-227ENST00000508852 NRXN2Q9P2S2 1712 aa18.09■□□□□ 0.49
CCHCR1-227ENST00000508852 KCNA3P22001 575 aa18.09■□□□□ 0.49
CCHCR1-227ENST00000508852 AFDNP55196 1824 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-227ENST00000508852 NFIXQ14938 502 aa18.08■□□□□ 0.48
CCHCR1-227ENST00000508852 SERPINB2P05120 415 aa18.07■□□□□ 0.48
CCHCR1-227ENST00000508852 SNRPA1P09661 255 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-227ENST00000508852 PNISRQ8TF01 805 aaKnown RBP18.05■□□□□ 0.48
CCHCR1-227ENST00000508852 BCL2L12Q9HB09 334 aa18.05■□□□□ 0.48
CCHCR1-227ENST00000508852 SCN7AQ01118 1682 aa18.05■□□□□ 0.48
CCHCR1-227ENST00000508852 DLEC1Q9Y238 1755 aa18.04■□□□□ 0.48
CCHCR1-227ENST00000508852 H0YIN7 160 aa18.04■□□□□ 0.48
CCHCR1-227ENST00000508852 RGL2O15211 777 aa18.04■□□□□ 0.48
CCHCR1-227ENST00000508852 ZNF526Q8TF50 670 aaPredicted RBP18.04■□□□□ 0.48
CCHCR1-227ENST00000508852 CARMIL3Q8ND23 1372 aa18.04■□□□□ 0.48
CCHCR1-227ENST00000508852 PDE6BP35913 854 aa18.03■□□□□ 0.48
CCHCR1-227ENST00000508852 TAF7Q15545 349 aaPredicted RBP18.03■□□□□ 0.48
CCHCR1-227ENST00000508852 SETDB2Q96T68 719 aa18.03■□□□□ 0.48
CCHCR1-227ENST00000508852 ZNF652Q9Y2D9 606 aa18.03■□□□□ 0.48
CCHCR1-227ENST00000508852 ZC3H4Q9UPT8 1303 aaKnown RBP18.02■□□□□ 0.48
CCHCR1-227ENST00000508852 CHRNA5P30532 468 aa18.02■□□□□ 0.48
CCHCR1-227ENST00000508852 RALBP1Q15311 655 aa18.02■□□□□ 0.48
CCHCR1-227ENST00000508852 CLEC4GQ6UXB4 293 aa18.02■□□□□ 0.48
CCHCR1-227ENST00000508852 MCM10Q7L590 875 aa18.02■□□□□ 0.48
CCHCR1-227ENST00000508852 TTLL6Q8N841 843 aa18.02■□□□□ 0.48
CCHCR1-227ENST00000508852 ZNF330Q9Y3S2 320 aaPredicted RBP18.02■□□□□ 0.48
CCHCR1-227ENST00000508852 A1BGP04217 495 aa18.01■□□□□ 0.47
CCHCR1-227ENST00000508852 C9orf131Q5VYM1 1079 aa18.01■□□□□ 0.47
CCHCR1-227ENST00000508852 BRIP1Q9BX63 1249 aa18.01■□□□□ 0.47
CCHCR1-227ENST00000508852 KDM2BQ8NHM5 1336 aa18■□□□□ 0.47
CCHCR1-227ENST00000508852 NPHP1O15259 732 aa18■□□□□ 0.47
CCHCR1-227ENST00000508852 DZIP3Q86Y13 1208 aaKnown RBP18■□□□□ 0.47
CCHCR1-227ENST00000508852 C2CD5Q86YS7 1000 aa18■□□□□ 0.47
CCHCR1-227ENST00000508852 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
CCHCR1-227ENST00000508852 MAPK8IP3Q9UPT6 1336 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 BCORQ6W2J9 1755 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 SBF1O95248 1867 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 ST5P78524 1137 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 TBC1D9BQ66K14 1250 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 BICDL1Q6ZP65 573 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 USP16Q9Y5T5 823 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 DLG5Q8TDM6 1919 aa17.99■□□□□ 0.47
CCHCR1-227ENST00000508852 KIF3CO14782 793 aa17.98■□□□□ 0.47
CCHCR1-227ENST00000508852 KCNQ3O43525 872 aa17.98■□□□□ 0.47
CCHCR1-227ENST00000508852 TOMM70O94826 608 aa17.98■□□□□ 0.47
CCHCR1-227ENST00000508852 CAMTA2O94983 1202 aa17.98■□□□□ 0.47
CCHCR1-227ENST00000508852 HSPA6P17066 643 aa17.98■□□□□ 0.47
CCHCR1-227ENST00000508852 RNF181Q9P0P0 153 aa17.98■□□□□ 0.47
CCHCR1-227ENST00000508852 NFE2L2Q16236 605 aa17.97■□□□□ 0.47
CCHCR1-227ENST00000508852 CNBD1Q8NA66 436 aa17.97■□□□□ 0.47
CCHCR1-227ENST00000508852 LMNB1P20700 586 aa17.96■□□□□ 0.47
CCHCR1-227ENST00000508852 C16orf71Q8IYS4 520 aaPredicted RBP17.96■□□□□ 0.47
CCHCR1-227ENST00000508852 PLEKHF1Q96S99 279 aa17.96■□□□□ 0.47
CCHCR1-227ENST00000508852 LAMB4A4D0S4 1761 aa17.96■□□□□ 0.47
CCHCR1-227ENST00000508852 DCTN1Q14203 1278 aa17.95■□□□□ 0.46
CCHCR1-227ENST00000508852 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
CCHCR1-227ENST00000508852 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
CCHCR1-227ENST00000508852 CNKSR1Q969H4 720 aa17.95■□□□□ 0.46
CCHCR1-227ENST00000508852 TNRC6CQ9HCJ0 1690 aaKnown RBP17.94■□□□□ 0.46
CCHCR1-227ENST00000508852 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.46
CCHCR1-227ENST00000508852 ANKRD31Q8N7Z5 1873 aa17.94■□□□□ 0.46
CCHCR1-227ENST00000508852 KDM3BQ7LBC6 1761 aa17.94■□□□□ 0.46
CCHCR1-227ENST00000508852 LMOD3Q0VAK6 560 aa17.93■□□□□ 0.46
CCHCR1-227ENST00000508852 STYK1Q6J9G0 422 aa17.93■□□□□ 0.46
CCHCR1-227ENST00000508852 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
CCHCR1-227ENST00000508852 RBM46Q8TBY0 533 aaKnown RBP17.93■□□□□ 0.46
CCHCR1-227ENST00000508852 BABAM1Q9NWV8 329 aa17.93■□□□□ 0.46
CCHCR1-227ENST00000508852 NBPF5PQ86XG9 351 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms