RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-205ENST00000505583 LGR6Q9HBX8 967 aa8.02□□□□□ -1.13
GYPB-205ENST00000505583 SBF1O95248 1867 aa8.02□□□□□ -1.13
GYPB-205ENST00000505583 C1orf141Q5JVX7 400 aa8.01□□□□□ -1.13
GYPB-205ENST00000505583 ARHGAP27Q6ZUM4 889 aa8.01□□□□□ -1.13
GYPB-205ENST00000505583 DNAJC10Q8IXB1 793 aa8.01□□□□□ -1.13
GYPB-205ENST00000505583 NMRK2Q9NPI5 230 aa8.01□□□□□ -1.13
GYPB-205ENST00000505583 PARP3Q9Y6F1 533 aa8.01□□□□□ -1.13
GYPB-205ENST00000505583 USP42Q9H9J4 1324 aaKnown RBP8.01□□□□□ -1.13
GYPB-205ENST00000505583 MRC1P22897 1456 aa8□□□□□ -1.13
GYPB-205ENST00000505583 UBR2Q8IWV8 1755 aa8□□□□□ -1.13
GYPB-205ENST00000505583 KCPQ6ZWJ8 1503 aa8□□□□□ -1.13
GYPB-205ENST00000505583 FCHSD2O94868 740 aa8□□□□□ -1.13
GYPB-205ENST00000505583 HMOX1P09601 288 aa8□□□□□ -1.13
GYPB-205ENST00000505583 CHRNA5P30532 468 aa8□□□□□ -1.13
GYPB-205ENST00000505583 SLC39A6Q13433 755 aa8□□□□□ -1.13
GYPB-205ENST00000505583 CCDC87Q9NVE4 849 aa8□□□□□ -1.13
GYPB-205ENST00000505583 KIF7Q2M1P5 1343 aa8□□□□□ -1.13
GYPB-205ENST00000505583 TM4SF1P30408 202 aa7.99□□□□□ -1.13
GYPB-205ENST00000505583 SLC52A2Q9HAB3 445 aa7.99□□□□□ -1.13
GYPB-205ENST00000505583 NRXN2Q9P2S2 1712 aa7.99□□□□□ -1.13
GYPB-205ENST00000505583 KNSTRNQ9Y448 316 aa7.99□□□□□ -1.13
GYPB-205ENST00000505583 DLEC1Q9Y238 1755 aa7.99□□□□□ -1.13
GYPB-205ENST00000505583 SOS1Q07889 1333 aaPredicted RBP7.99□□□□□ -1.13
GYPB-205ENST00000505583 CCDC88AQ3V6T2 1871 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 SIPA1L3O60292 1781 aaPredicted RBP7.98□□□□□ -1.13
GYPB-205ENST00000505583 POLRMTO00411 1230 aaKnown RBP7.98□□□□□ -1.13
GYPB-205ENST00000505583 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
GYPB-205ENST00000505583 RNMTO43148 476 aaKnown RBP7.98□□□□□ -1.13
GYPB-205ENST00000505583 CYP19A1P11511 503 aaPredicted RBP7.98□□□□□ -1.13
GYPB-205ENST00000505583 MTHFSDQ2M296 383 aaKnown RBP7.98□□□□□ -1.13
GYPB-205ENST00000505583 AKAP4Q5JQC9 854 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 IFFO2Q5TF58 517 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 C9orf131Q5VYM1 1079 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 USPL1Q5W0Q7 1092 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 BCL2L12Q9HB09 334 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 PIM2Q9P1W9 311 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 WDR90Q96KV7 1748 aa7.98□□□□□ -1.13
GYPB-205ENST00000505583 TOMM70O94826 608 aa7.97□□□□□ -1.13
GYPB-205ENST00000505583 PRELPP51888 382 aa7.97□□□□□ -1.13
GYPB-205ENST00000505583 NFIXQ14938 502 aa7.97□□□□□ -1.13
GYPB-205ENST00000505583 DALRD3Q5D0E6 543 aaKnown RBP7.97□□□□□ -1.13
GYPB-205ENST00000505583 CC2D1BQ5T0F9 858 aaKnown RBP7.97□□□□□ -1.13
GYPB-205ENST00000505583 DNAJC5GQ8N7S2 189 aa7.97□□□□□ -1.13
GYPB-205ENST00000505583 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
GYPB-205ENST00000505583 ZBTB1Q9Y2K1 713 aa7.97□□□□□ -1.13
GYPB-205ENST00000505583 COL3A1P02461 1466 aaPredicted RBP7.97□□□□□ -1.13
GYPB-205ENST00000505583 ANKRD31Q8N7Z5 1873 aa7.97□□□□□ -1.13
GYPB-205ENST00000505583 CARMIL3Q8ND23 1372 aa7.97□□□□□ -1.13
GYPB-205ENST00000505583 HTRA3P83110 453 aa7.96□□□□□ -1.14
GYPB-205ENST00000505583 COL15A1P39059 1388 aa7.96□□□□□ -1.14
GYPB-205ENST00000505583 TNRC6CQ9HCJ0 1690 aaKnown RBP7.95□□□□□ -1.14
GYPB-205ENST00000505583 COL11A2P13942 1736 aaPredicted RBP7.95□□□□□ -1.14
GYPB-205ENST00000505583 DIAPH1O60610 1272 aaKnown RBP7.95□□□□□ -1.14
GYPB-205ENST00000505583 RASSF7Q02833 373 aa7.95□□□□□ -1.14
GYPB-205ENST00000505583 CNGB1Q14028 1251 aaPredicted RBP7.95□□□□□ -1.14
GYPB-205ENST00000505583 IL17REQ8NFR9 667 aa7.95□□□□□ -1.14
GYPB-205ENST00000505583 RNF181Q9P0P0 153 aa7.95□□□□□ -1.14
GYPB-205ENST00000505583 NARFQ9UHQ1 456 aa7.95□□□□□ -1.14
GYPB-205ENST00000505583 SCN7AQ01118 1682 aa7.95□□□□□ -1.14
GYPB-205ENST00000505583 TIAM2Q8IVF5 1701 aa7.95□□□□□ -1.14
GYPB-205ENST00000505583 CACNA1SQ13698 1873 aa7.94□□□□□ -1.14
GYPB-205ENST00000505583 ZPR1O75312 459 aa7.94□□□□□ -1.14
GYPB-205ENST00000505583 CANXP27824 592 aaKnown RBP7.94□□□□□ -1.14
GYPB-205ENST00000505583 VASPP50552 380 aaPredicted RBP7.94□□□□□ -1.14
GYPB-205ENST00000505583 APLP1P51693 650 aa7.94□□□□□ -1.14
GYPB-205ENST00000505583 ZNF496Q96IT1 587 aaPredicted RBP7.94□□□□□ -1.14
GYPB-205ENST00000505583 RRAGCQ9HB90 399 aa7.94□□□□□ -1.14
GYPB-205ENST00000505583 SERPINB2P05120 415 aa7.93□□□□□ -1.14
GYPB-205ENST00000505583 EIF5P55010 431 aaKnown RBP7.93□□□□□ -1.14
GYPB-205ENST00000505583 BICDL1Q6ZP65 573 aa7.93□□□□□ -1.14
GYPB-205ENST00000505583 VSIG10Q8N0Z9 540 aa7.93□□□□□ -1.14
GYPB-205ENST00000505583 CCDC24Q8N4L8 307 aa7.93□□□□□ -1.14
GYPB-205ENST00000505583 RBM46Q8TBY0 533 aaKnown RBP7.93□□□□□ -1.14
GYPB-205ENST00000505583 BCORQ6W2J9 1755 aa7.92□□□□□ -1.14
GYPB-205ENST00000505583 FER1L6Q2WGJ9 1857 aa7.92□□□□□ -1.14
GYPB-205ENST00000505583 NFKBIEO00221 500 aa7.92□□□□□ -1.14
GYPB-205ENST00000505583 U2SURPO15042 1029 aaKnown RBP7.92□□□□□ -1.14
GYPB-205ENST00000505583 KCNQ3O43525 872 aa7.92□□□□□ -1.14
GYPB-205ENST00000505583 TBC1D9BQ66K14 1250 aa7.92□□□□□ -1.14
GYPB-205ENST00000505583 C2CD5Q86YS7 1000 aa7.92□□□□□ -1.14
GYPB-205ENST00000505583 PHACTR3Q96KR7 559 aa7.92□□□□□ -1.14
GYPB-205ENST00000505583 DICER1Q9UPY3 1922 aaKnown RBP7.91□□□□□ -1.14
GYPB-205ENST00000505583 SPDYE2BA6NHP3 402 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 A1BGP04217 495 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 SPDYE6P0CI01 402 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 SPDYE2Q495Y8 402 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 ZNF790Q6PG37 636 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 TBC1D2BQ9UPU7 963 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 KDM2BQ8NHM5 1336 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 HEG1Q9ULI3 1381 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 SLX4Q8IY92 1834 aa7.91□□□□□ -1.14
GYPB-205ENST00000505583 CEMIPQ8WUJ3 1361 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 NPC1L1Q9UHC9 1359 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 PRAMEF22A3QJZ6 481 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 GNAT3A8MTJ3 354 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 POTECB2RU33 542 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 STARD3NLO95772 234 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 PIP4K2AP48426 406 aaPredicted RBP7.9□□□□□ -1.14
GYPB-205ENST00000505583 PLCB2Q00722 1185 aa7.9□□□□□ -1.14
GYPB-205ENST00000505583 PRR5LQ6MZQ0 368 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms