RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CHPF2Q9P2E5 772 aa10.28□□□□□ -0.76
TOPBP1-202ENST00000503338 PXDNLA1KZ92 1463 aa10.28□□□□□ -0.76
TOPBP1-202ENST00000503338 A0A0G2JS52 829 aa10.27□□□□□ -0.77
TOPBP1-202ENST00000503338 MYT1Q01538 1121 aa10.27□□□□□ -0.77
TOPBP1-202ENST00000503338 CENPQQ7L2Z9 268 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-202ENST00000503338 MARCH10Q8NA82 808 aaPredicted RBP10.27□□□□□ -0.77
TOPBP1-202ENST00000503338 NECTIN2Q92692 538 aa10.27□□□□□ -0.77
TOPBP1-202ENST00000503338 QTRT2Q9H974 415 aaKnown RBP10.27□□□□□ -0.77
TOPBP1-202ENST00000503338 PAPPAQ13219 1627 aa10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 STARD3NLO95772 234 aa10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 SYTL4Q96C24 671 aaPredicted RBP10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 RWDD1Q9H446 243 aaPredicted RBP10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 ATG3Q9NT62 314 aa10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 ZBTB40Q9NUA8 1239 aa10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 HDAC5Q9UQL6 1122 aa10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 TNNQ9UQP3 1299 aa10.26□□□□□ -0.77
TOPBP1-202ENST00000503338 RGS12O14924 1447 aa10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 THSD7AQ9UPZ6 1657 aa10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 TOGARAM1Q9Y4F4 1720 aa10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 UBR2Q8IWV8 1755 aa10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 KCPQ6ZWJ8 1503 aa10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 ZBTB7BO15156 539 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 G2E3Q7L622 706 aa10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 USP16Q9Y5T5 823 aa10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 IBTKQ9P2D0 1353 aaPredicted RBP10.25□□□□□ -0.77
TOPBP1-202ENST00000503338 PTCD1O75127 700 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 GNAI3P08754 354 aa10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 HMGB2P26583 209 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 KSR2Q6VAB6 950 aa10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 DNAAF4Q8WXU2 420 aa10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 PHAXQ9H814 394 aaKnown RBP10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 ASAP1Q9ULH1 1129 aa10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 ATP10DQ9P241 1426 aa10.24□□□□□ -0.77
TOPBP1-202ENST00000503338 GLI3P10071 1580 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 PRAMEF22A3QJZ6 481 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 RBM6P78332 1123 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 HDAC1Q13547 482 aaPredicted RBP10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 PDIA6Q15084 440 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 SLC4A10Q6U841 1118 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 SEPT12Q8IYM1 358 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 RBM42Q9BTD8 480 aaKnown RBP10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 SRCIN1Q9C0H9 1055 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 LAMB4A4D0S4 1761 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 ITGB4P16144 1822 aa10.23□□□□□ -0.77
TOPBP1-202ENST00000503338 PI4KAP2A4QPH2 592 aa10.22□□□□□ -0.77
TOPBP1-202ENST00000503338 ALDH1L1O75891 902 aa10.22□□□□□ -0.77
TOPBP1-202ENST00000503338 NEXNQ0ZGT2 675 aa10.22□□□□□ -0.77
TOPBP1-202ENST00000503338 RPAP2Q8IXW5 612 aaPredicted RBP10.22□□□□□ -0.77
TOPBP1-202ENST00000503338 PI4KAP1Q8N8J0 262 aa10.22□□□□□ -0.77
TOPBP1-202ENST00000503338 KDM2BQ8NHM5 1336 aa10.22□□□□□ -0.77
TOPBP1-202ENST00000503338 DOT1LQ8TEK3 1739 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 F6X3S4 739 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 MYL6BP14649 208 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 PROSER3Q2NL68 480 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 ANKRD13DQ6ZTN6 518 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 COPS6Q7L5N1 327 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 RIC3Q7Z5B4 369 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 NPM2Q86SE8 214 aaKnown RBP10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 LINS1Q8NG48 757 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 PLBD2Q8NHP8 589 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 XAGE3Q8WTP9 111 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 ACSBG1Q96GR2 724 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 PCDHB15Q9Y5E8 787 aa10.21□□□□□ -0.77
TOPBP1-202ENST00000503338 KAT6BQ8WYB5 2073 aa10.21□□□□□ -0.78
TOPBP1-202ENST00000503338 LOC102724428A0A0B4J2F2 783 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 ADCY9O60503 1353 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 HMMRO75330 724 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 C5P01031 1676 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 GNAI2P04899 355 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 SIK1P57059 783 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 BEND3Q5T5X7 828 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 FAM196AQ6ZSG2 479 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 LRP10Q7Z4F1 713 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 DNAJC10Q8IXB1 793 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 PALLDQ8WX93 1383 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 MAP3K2Q9Y2U5 619 aa10.2□□□□□ -0.78
TOPBP1-202ENST00000503338 ANXA1P04083 346 aa10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 UBTFL1P0CB47 393 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 CYP19A1P11511 503 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 AIMP1Q12904 312 aaKnown RBP10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 KRT27Q7Z3Y8 459 aa10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 GCC1Q96CN9 775 aa10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 METTL22Q9BUU2 404 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 N4BP2Q86UW6 1770 aaPredicted RBP10.19□□□□□ -0.78
TOPBP1-202ENST00000503338 NBPF26B4DH59 902 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 A1BGP04217 495 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 RXRBP28702 533 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 ATP6V1AP38606 617 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 IL6STP40189 918 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 NBPF14Q5TI25 921 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 NBPF10Q6P3W6 841 aaKnown RBP10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 KIF6Q6ZMV9 814 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 NBPF15Q8N660 670 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 ANKRD44Q8N8A2 993 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 MEIS3Q99687 375 aa10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 CICQ96RK0 1608 aaPredicted RBP10.18□□□□□ -0.78
TOPBP1-202ENST00000503338 KCNQ2O43526 872 aa10.17□□□□□ -0.78
TOPBP1-202ENST00000503338 IGHDP01880 384 aa10.17□□□□□ -0.78
TOPBP1-202ENST00000503338 HSP90AB3PQ58FF7 597 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms