RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 IFT74Q96LB3 600 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 SEC63Q9UGP8 760 aaKnown RBP12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 CCDC196A0A1B0GTZ2 297 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 CASTP20810 708 aaKnown RBP12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 KIF6Q6ZMV9 814 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 ZC4H2Q9NQZ6 224 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 TXNDC16Q9P2K2 825 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 DNAJC8O75937 253 aaPredicted RBP12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 SETDB1Q15047 1291 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 MTMR7Q9Y216 660 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 ATP2A2P16615 1042 aaKnown RBP12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 CIZ1Q9ULV3 898 aaPredicted RBP12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 MAATS1Q7Z4T9 603 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 WIZO95785 1651 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 EHMT1Q9H9B1 1298 aa12.89□□□□□ -0.35
AC055713.1-201ENST00000498967 RSPH3Q86UC2 560 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 TUBBP07437 444 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 LACTBP83111 547 aaPredicted RBP12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 SRCIN1Q9C0H9 1055 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 PPP6R1Q9UPN7 881 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 A6NNZ2 444 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 TUBB8Q3ZCM7 444 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 LARP1BQ659C4 914 aaKnown RBP12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 SCLT1Q96NL6 688 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 SELENOOQ9BVL4 669 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 TOP1P11387 765 aaKnown RBP12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 GRPEL1Q9HAV7 217 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 ST20-MTHFSA0A0A6YYL1 179 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 IBSPP21815 317 aaPredicted RBP12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 TRIM7Q9C029 511 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 ANO10Q9NW15 660 aa12.88□□□□□ -0.35
AC055713.1-201ENST00000498967 MCM6Q14566 821 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 HYPKQ9NX55 129 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 TACC3Q9Y6A5 838 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 TAOK1Q7L7X3 1001 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 GAS8O95995 478 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 CCDC121Q6ZUS5 278 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 LMNTD2Q8IXW0 634 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 EBAG9O00559 213 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 TMEM266Q2M3C6 531 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 PHLDB2Q86SQ0 1253 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 ZSCAN31Q96LW9 406 aaPredicted RBP12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 ARFGAP3Q9NP61 516 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 PAXBP1Q9Y5B6 917 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
AC055713.1-201ENST00000498967 CEBPZQ03701 1054 aaKnown RBP12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 GBP6Q6ZN66 633 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 MCM5P33992 734 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 CCDC144CPQ8IYA2 1237 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 NOC2LQ9Y3T9 749 aaKnown RBP12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 TNNT1P13805 278 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 ARFGAP2Q8N6H7 521 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 URI1O94763 535 aaPredicted RBP12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 ATP11AP98196 1134 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 AFAP1L2Q8N4X5 818 aa12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 NUP88Q99567 741 aaPredicted RBP12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.86□□□□□ -0.35
AC055713.1-201ENST00000498967 USP25Q9UHP3 1055 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 AMPD3Q01432 767 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 CFAP157Q5JU67 520 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 HVCN1Q96D96 273 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 TSPYL2Q9H2G4 693 aaPredicted RBP12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 USP47Q96K76 1375 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 CIB2O75838 187 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 PANK3Q9H999 370 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 LIG1P18858 919 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 FMNL3Q8IVF7 1028 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 MPHOSPH6Q99547 160 aaKnown RBP12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 AKAP2Q9Y2D5 859 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 GTF2F1P35269 517 aaKnown RBP eCLIP12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 BCAP29Q9UHQ4 241 aa12.85□□□□□ -0.35
AC055713.1-201ENST00000498967 CEP57Q86XR8 500 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 LNPKQ9C0E8 428 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 MYOM3Q5VTT5 1437 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 TRPC3Q13507 836 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 ELL2O00472 640 aaPredicted RBP12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 TUBB4AP04350 444 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 TDRD12Q587J7 1177 aaKnown RBP12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 NUP133Q8WUM0 1156 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 PTPRGP23470 1445 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 IRX4P78413 519 aa12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
AC055713.1-201ENST00000498967 ARHGAP24Q8N264 748 aa12.83□□□□□ -0.35
AC055713.1-201ENST00000498967 SPAG5Q96R06 1193 aa12.83□□□□□ -0.35
AC055713.1-201ENST00000498967 TMOD2Q9NZR1 351 aa12.83□□□□□ -0.35
AC055713.1-201ENST00000498967 TSNAXIP1Q2TAA8 658 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 TBC1D5Q92609 795 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 HAUS8Q9BT25 410 aa12.83□□□□□ -0.36
AC055713.1-201ENST00000498967 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms