RNA–Protein interactions for RNA: ENST00000498787.1

PARP1-209, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 628 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-209ENST00000498787 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
PARP1-209ENST00000498787 TNS2Q63HR2 1409 aa18.2■□□□□ 0.5
PARP1-209ENST00000498787 ATP10DQ9P241 1426 aa18.2■□□□□ 0.5
PARP1-209ENST00000498787 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
PARP1-209ENST00000498787 IBTKQ9P2D0 1353 aaPredicted RBP18.18■□□□□ 0.5
PARP1-209ENST00000498787 VPS72Q15906 364 aa18.18■□□□□ 0.5
PARP1-209ENST00000498787 LRP6O75581 1613 aa18.17■□□□□ 0.5
PARP1-209ENST00000498787 PI4KAP2A4QPH2 592 aa18.17■□□□□ 0.5
PARP1-209ENST00000498787 UBTFL1P0CB47 393 aaPredicted RBP18.17■□□□□ 0.5
PARP1-209ENST00000498787 RGS3P49796 1198 aa18.17■□□□□ 0.5
PARP1-209ENST00000498787 NEXNQ0ZGT2 675 aa18.17■□□□□ 0.5
PARP1-209ENST00000498787 FNBP4Q8N3X1 1017 aaPredicted RBP18.17■□□□□ 0.5
PARP1-209ENST00000498787 PI4KAP1Q8N8J0 262 aa18.17■□□□□ 0.5
PARP1-209ENST00000498787 MEIS3Q99687 375 aa18.17■□□□□ 0.5
PARP1-209ENST00000498787 RBM19Q9Y4C8 960 aaKnown RBP18.17■□□□□ 0.5
PARP1-209ENST00000498787 NUCB1Q02818 461 aa18.16■□□□□ 0.5
PARP1-209ENST00000498787 C8orf37Q96NL8 207 aa18.16■□□□□ 0.5
PARP1-209ENST00000498787 NRAPQ86VF7 1730 aa18.15■□□□□ 0.5
PARP1-209ENST00000498787 FAM161AQ3B820 660 aa18.15■□□□□ 0.5
PARP1-209ENST00000498787 BEND3Q5T5X7 828 aa18.15■□□□□ 0.5
PARP1-209ENST00000498787 CEP85Q6P2H3 762 aa18.15■□□□□ 0.5
PARP1-209ENST00000498787 LINS1Q8NG48 757 aa18.15■□□□□ 0.5
PARP1-209ENST00000498787 C1orf115Q9H7X2 142 aa18.15■□□□□ 0.5
PARP1-209ENST00000498787 PDE4AP27815 886 aa18.14■□□□□ 0.49
PARP1-209ENST00000498787 PDIA6Q15084 440 aa18.14■□□□□ 0.49
PARP1-209ENST00000498787 RIC3Q7Z5B4 369 aa18.14■□□□□ 0.49
PARP1-209ENST00000498787 DCTPP1Q9H773 170 aa18.14■□□□□ 0.49
PARP1-209ENST00000498787 MAP3K2Q9Y2U5 619 aa18.14■□□□□ 0.49
PARP1-209ENST00000498787 USP16Q9Y5T5 823 aa18.14■□□□□ 0.49
PARP1-209ENST00000498787 PRAMEF22A3QJZ6 481 aa18.13■□□□□ 0.49
PARP1-209ENST00000498787 STARD3NLO95772 234 aa18.13■□□□□ 0.49
PARP1-209ENST00000498787 MEX3CQ5U5Q3 659 aaKnown RBP18.13■□□□□ 0.49
PARP1-209ENST00000498787 CHD1LQ86WJ1 897 aa18.13■□□□□ 0.49
PARP1-209ENST00000498787 BACH2Q9BYV9 841 aa18.13■□□□□ 0.49
PARP1-209ENST00000498787 ATP8B2P98198 1209 aa18.12■□□□□ 0.49
PARP1-209ENST00000498787 ANKRD13DQ6ZTN6 518 aa18.12■□□□□ 0.49
PARP1-209ENST00000498787 PIGBQ92521 554 aa18.12■□□□□ 0.49
PARP1-209ENST00000498787 USP44Q9H0E7 712 aa18.12■□□□□ 0.49
PARP1-209ENST00000498787 ADCY9O60503 1353 aa18.12■□□□□ 0.49
PARP1-209ENST00000498787 SHANK3Q9BYB0 1731 aa18.12■□□□□ 0.49
PARP1-209ENST00000498787 ANXA1P04083 346 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 ANKRD45Q5TZF3 282 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 COPS6Q7L5N1 327 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 SIRT2Q8IXJ6 389 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 XAGE3Q8WTP9 111 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 C9orf78Q9NZ63 289 aaPredicted RBP18.11■□□□□ 0.49
PARP1-209ENST00000498787 USP21Q9UK80 565 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 BCL9O00512 1426 aa18.11■□□□□ 0.49
PARP1-209ENST00000498787 EIF5BO60841 1220 aaKnown RBP18.1■□□□□ 0.49
PARP1-209ENST00000498787 PTCD1O75127 700 aaKnown RBP18.1■□□□□ 0.49
PARP1-209ENST00000498787 MYL6BP14649 208 aa18.1■□□□□ 0.49
PARP1-209ENST00000498787 AIMP1Q12904 312 aaKnown RBP18.1■□□□□ 0.49
PARP1-209ENST00000498787 PLBD2Q8NHP8 589 aa18.1■□□□□ 0.49
PARP1-209ENST00000498787 KCPQ6ZWJ8 1503 aa18.09■□□□□ 0.49
PARP1-209ENST00000498787 BCL9LQ86UU0 1499 aa18.09■□□□□ 0.49
PARP1-209ENST00000498787 SMARCC1Q92922 1105 aaPredicted RBP18.09■□□□□ 0.49
PARP1-209ENST00000498787 METTL22Q9BUU2 404 aaPredicted RBP18.09■□□□□ 0.49
PARP1-209ENST00000498787 ATG3Q9NT62 314 aa18.09■□□□□ 0.49
PARP1-209ENST00000498787 N4BP2Q86UW6 1770 aaPredicted RBP18.09■□□□□ 0.49
PARP1-209ENST00000498787 PAPPAQ13219 1627 aa18.09■□□□□ 0.49
PARP1-209ENST00000498787 WNK3Q9BYP7 1800 aa18.08■□□□□ 0.48
PARP1-209ENST00000498787 HSPA1LP34931 641 aa18.08■□□□□ 0.48
PARP1-209ENST00000498787 HSP90AB4PQ58FF6 505 aa18.08■□□□□ 0.48
PARP1-209ENST00000498787 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
PARP1-209ENST00000498787 LRRFIP2Q9Y608 721 aaKnown RBP18.07■□□□□ 0.48
PARP1-209ENST00000498787 LAMB4A4D0S4 1761 aa18.07■□□□□ 0.48
PARP1-209ENST00000498787 UTYO14607 1347 aa18.06■□□□□ 0.48
PARP1-209ENST00000498787 PRIM1P49642 420 aaKnown RBP18.06■□□□□ 0.48
PARP1-209ENST00000498787 LRP10Q7Z4F1 713 aa18.06■□□□□ 0.48
PARP1-209ENST00000498787 NPM2Q86SE8 214 aaKnown RBP18.06■□□□□ 0.48
PARP1-209ENST00000498787 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
PARP1-209ENST00000498787 ASAP1Q9ULH1 1129 aa18.06■□□□□ 0.48
PARP1-209ENST00000498787 UBR2Q8IWV8 1755 aa18.06■□□□□ 0.48
PARP1-209ENST00000498787 GRM8O00222 908 aa18.05■□□□□ 0.48
PARP1-209ENST00000498787 RAB11FIP3O75154 756 aa18.05■□□□□ 0.48
PARP1-209ENST00000498787 MARCH10Q8NA82 808 aaPredicted RBP18.05■□□□□ 0.48
PARP1-209ENST00000498787 LNPKQ9C0E8 428 aa18.05■□□□□ 0.48
PARP1-209ENST00000498787 C5P01031 1676 aa18.04■□□□□ 0.48
PARP1-209ENST00000498787 MTX1Q13505 466 aa18.04■□□□□ 0.48
PARP1-209ENST00000498787 FAM98CQ17RN3 349 aaKnown RBP18.04■□□□□ 0.48
PARP1-209ENST00000498787 SSH3Q8TE77 659 aa18.04■□□□□ 0.48
PARP1-209ENST00000498787 TRPC5Q9UL62 973 aaPredicted RBP18.04■□□□□ 0.48
PARP1-209ENST00000498787 NEURL1BA8MQ27 555 aa18.03■□□□□ 0.48
PARP1-209ENST00000498787 ANP32AP39687 249 aaKnown RBP18.03■□□□□ 0.48
PARP1-209ENST00000498787 SKAP1Q86WV1 359 aa18.03■□□□□ 0.48
PARP1-209ENST00000498787 MYD88Q99836 296 aa18.03■□□□□ 0.48
PARP1-209ENST00000498787 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
PARP1-209ENST00000498787 A1BGP04217 495 aa18.02■□□□□ 0.48
PARP1-209ENST00000498787 GCKRQ14397 625 aa18.02■□□□□ 0.48
PARP1-209ENST00000498787 NBPF14Q5TI25 921 aa18.02■□□□□ 0.48
PARP1-209ENST00000498787 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
PARP1-209ENST00000498787 KIF6Q6ZMV9 814 aa18.02■□□□□ 0.48
PARP1-209ENST00000498787 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
PARP1-209ENST00000498787 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.02■□□□□ 0.48
PARP1-209ENST00000498787 TOGARAM1Q9Y4F4 1720 aa18.02■□□□□ 0.48
PARP1-209ENST00000498787 GLI3P10071 1580 aa18.01■□□□□ 0.47
PARP1-209ENST00000498787 A0A0G2JS52 829 aa18.01■□□□□ 0.47
PARP1-209ENST00000498787 NBPF7P0C2Y1 421 aaPredicted RBP18.01■□□□□ 0.47
PARP1-209ENST00000498787 MYT1Q01538 1121 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms