RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 BTAF1O14981 1849 aa10.21□□□□□ -0.78
PDZRN3-212ENST00000498048 NUP98P52948 1817 aa10.21□□□□□ -0.78
PDZRN3-212ENST00000498048 UBAP1LF5GYI3 381 aa10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 FLIIQ13045 1269 aa10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 FKBP5Q13451 457 aaPredicted RBP10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 ZNF831Q5JPB2 1677 aa10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 CHMP4AQ9BY43 222 aa10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 RWDD1Q9H446 243 aaPredicted RBP10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 ZBTB40Q9NUA8 1239 aa10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 HEG1Q9ULI3 1381 aa10.2□□□□□ -0.78
PDZRN3-212ENST00000498048 LAMB2P55268 1798 aa10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 JCADQ9P266 1359 aa10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 KCNQ3O43525 872 aa10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 IGHDP01880 384 aa10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 INTS3Q68E01 1043 aaKnown RBP10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 G2E3Q7L622 706 aa10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 SKAP1Q86WV1 359 aa10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 ZCRB1Q8TBF4 217 aaKnown RBP10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 TAF1LQ8IZX4 1826 aa10.19□□□□□ -0.78
PDZRN3-212ENST00000498048 EIF2S2P20042 333 aaKnown RBP10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 RGS3P49796 1198 aa10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 HDAC1Q13547 482 aaPredicted RBP10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 TTC5Q8N0Z6 440 aa10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 C1orf115Q9H7X2 142 aa10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 CHPF2Q9P2E5 772 aa10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 USP35Q9P2H5 1018 aa10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 BRWD3Q6RI45 1802 aa10.18□□□□□ -0.78
PDZRN3-212ENST00000498048 ADAMTS2O95450 1211 aa10.17□□□□□ -0.78
PDZRN3-212ENST00000498048 CCT4P50991 539 aaKnown RBP10.17□□□□□ -0.78
PDZRN3-212ENST00000498048 ZNF790Q6PG37 636 aa10.17□□□□□ -0.78
PDZRN3-212ENST00000498048 SLC4A10Q6U841 1118 aa10.17□□□□□ -0.78
PDZRN3-212ENST00000498048 SPEF2Q9C093 1822 aa10.17□□□□□ -0.78
PDZRN3-212ENST00000498048 LY75O60449 1722 aa10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 NUTM2BA6NNL0 878 aaPredicted RBP10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 NUTM2EB1AL46 878 aaPredicted RBP10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 F6X3S4 739 aa10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 ZBTB7BO15156 539 aaPredicted RBP10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 CABP4P57796 275 aa10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 SLC39A6Q13433 755 aa10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 NUTM2AQ8IVF1 878 aaPredicted RBP10.16□□□□□ -0.78
PDZRN3-212ENST00000498048 SCN7AQ01118 1682 aa10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 ADCY9O60503 1353 aa10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 GIGYF1O75420 1035 aaPredicted RBP10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 NFATC2IPQ8NCF5 419 aa10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 FMNL2Q96PY5 1086 aa10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 MEIS3Q99687 375 aa10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 DBF4Q9UBU7 674 aaPredicted RBP10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 PDZRN3Q9UPQ7 1066 aa10.15□□□□□ -0.78
PDZRN3-212ENST00000498048 ANXA1P04083 346 aa10.14□□□□□ -0.79
PDZRN3-212ENST00000498048 VASPP50552 380 aaPredicted RBP10.14□□□□□ -0.79
PDZRN3-212ENST00000498048 NKX1-1Q15270 411 aaPredicted RBP10.14□□□□□ -0.79
PDZRN3-212ENST00000498048 DDX54Q8TDD1 881 aaKnown RBP10.14□□□□□ -0.79
PDZRN3-212ENST00000498048 PHAXQ9H814 394 aaKnown RBP10.14□□□□□ -0.79
PDZRN3-212ENST00000498048 RBM19Q9Y4C8 960 aaKnown RBP10.14□□□□□ -0.79
PDZRN3-212ENST00000498048 MYH14Q7Z406 1995 aaKnown RBP10.14□□□□□ -0.79
PDZRN3-212ENST00000498048 SPATA31A1Q5TZJ5 1347 aa10.13□□□□□ -0.79
PDZRN3-212ENST00000498048 PRAMEF22A3QJZ6 481 aa10.13□□□□□ -0.79
PDZRN3-212ENST00000498048 ERVV-2B6SEH9 535 aa10.13□□□□□ -0.79
PDZRN3-212ENST00000498048 SMC5Q8IY18 1101 aa10.13□□□□□ -0.79
PDZRN3-212ENST00000498048 ZNF496Q96IT1 587 aaPredicted RBP10.13□□□□□ -0.79
PDZRN3-212ENST00000498048 C4AP0C0L4 1744 aa10.13□□□□□ -0.79
PDZRN3-212ENST00000498048 C4BP0C0L5 1744 aa10.13□□□□□ -0.79
PDZRN3-212ENST00000498048 PROSER3Q2NL68 480 aa10.12□□□□□ -0.79
PDZRN3-212ENST00000498048 REM2Q8IYK8 340 aaPredicted RBP10.12□□□□□ -0.79
PDZRN3-212ENST00000498048 DNAAF4Q8WXU2 420 aa10.12□□□□□ -0.79
PDZRN3-212ENST00000498048 DDX21Q9NR30 783 aaKnown RBP eCLIP10.12□□□□□ -0.79
PDZRN3-212ENST00000498048 HYPKQ9NX55 129 aa10.12□□□□□ -0.79
PDZRN3-212ENST00000498048 TMOD3Q9NYL9 352 aa10.12□□□□□ -0.79
PDZRN3-212ENST00000498048 BCL9O00512 1426 aa10.12□□□□□ -0.79
PDZRN3-212ENST00000498048 A0A1B0GUL6 1792 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 ERBB4Q15303 1308 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 SPATA31A5Q5VU36 1347 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 SPATA31A6Q5VVP1 1343 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 SPATA31A7Q8IWB4 1347 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 DDX60Q8IY21 1712 aaKnown RBP10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 DDX58O95786 925 aaKnown RBP10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 GNAI3P08754 354 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 SNRPA1P09661 255 aaKnown RBP10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 CEP85Q6P2H3 762 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 ANKRD44Q8N8A2 993 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 CERKQ8TCT0 537 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 GCC1Q96CN9 775 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 CDCA7Q9BWT1 371 aaPredicted RBP10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 SRCIN1Q9C0H9 1055 aa10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 THRAP3Q9Y2W1 955 aaKnown RBP10.11□□□□□ -0.79
PDZRN3-212ENST00000498048 BCL9LQ86UU0 1499 aa10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 MYH7P12883 1935 aa10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 HMMRO75330 724 aa10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 GNAI2P04899 355 aa10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 PDE4AP27815 886 aa10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 FAM161AQ3B820 660 aa10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 CLEC11AQ9Y240 323 aa10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 CCDC9Q9Y3X0 531 aaKnown RBP10.1□□□□□ -0.79
PDZRN3-212ENST00000498048 PI4KAP2A4QPH2 592 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 UBTFL1P0CB47 393 aaPredicted RBP10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 MYL6BP14649 208 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 NUCB1Q02818 461 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 SIRT2Q8IXJ6 389 aa10.09□□□□□ -0.79
PDZRN3-212ENST00000498048 RPAP2Q8IXW5 612 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms