RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 FCHSD1Q86WN1 690 aa8.3□□□□□ -1.08
CLK1-214ENST00000496205 CHIC2Q9UKJ5 165 aa8.3□□□□□ -1.08
CLK1-214ENST00000496205 DCDC2BA2VCK2 349 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 ATXN7O15265 892 aaPredicted RBP8.29□□□□□ -1.08
CLK1-214ENST00000496205 INHAP05111 366 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 CD33P20138 364 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 TNP2Q05952 138 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 SLFNL1Q499Z3 407 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 NLRP8Q86W28 1048 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 ZNF295-AS1Q8N0V1 137 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 AIDAQ96BJ3 306 aa8.29□□□□□ -1.08
CLK1-214ENST00000496205 A0A1W2PNR3 127 aa8.28□□□□□ -1.08
CLK1-214ENST00000496205 PIK3R2O00459 728 aa8.28□□□□□ -1.08
CLK1-214ENST00000496205 MAPTP10636 758 aaKnown RBP8.28□□□□□ -1.08
CLK1-214ENST00000496205 GDF10P55107 478 aa8.28□□□□□ -1.08
CLK1-214ENST00000496205 DOC2BQ14184 412 aa8.28□□□□□ -1.08
CLK1-214ENST00000496205 EIF4G2P78344 907 aaKnown RBP eCLIP8.27□□□□□ -1.09
CLK1-214ENST00000496205 C1orf216Q8TAB5 229 aa8.27□□□□□ -1.09
CLK1-214ENST00000496205 TRIM11Q96F44 468 aa8.27□□□□□ -1.09
CLK1-214ENST00000496205 NIFKQ9BYG3 293 aaKnown RBP8.27□□□□□ -1.09
CLK1-214ENST00000496205 SEMA6BQ9H3T3 888 aa8.27□□□□□ -1.09
CLK1-214ENST00000496205 NOP53Q9NZM5 478 aaKnown RBP8.27□□□□□ -1.09
CLK1-214ENST00000496205 APBB1O00213 710 aa8.26□□□□□ -1.09
CLK1-214ENST00000496205 ADH6P28332 368 aa8.26□□□□□ -1.09
CLK1-214ENST00000496205 SMTNP53814 917 aa8.26□□□□□ -1.09
CLK1-214ENST00000496205 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
CLK1-214ENST00000496205 FAM182BQ5T319 152 aa8.26□□□□□ -1.09
CLK1-214ENST00000496205 USP3Q9Y6I4 520 aa8.26□□□□□ -1.09
CLK1-214ENST00000496205 KHNYNO15037 678 aaKnown RBP8.25□□□□□ -1.09
CLK1-214ENST00000496205 PCBP4P57723 403 aaKnown RBP8.25□□□□□ -1.09
CLK1-214ENST00000496205 ARSJQ5FYB0 599 aaPredicted RBP8.25□□□□□ -1.09
CLK1-214ENST00000496205 SERTAD1Q9UHV2 236 aa8.25□□□□□ -1.09
CLK1-214ENST00000496205 IQSEC3Q9UPP2 1182 aaPredicted RBP8.25□□□□□ -1.09
CLK1-214ENST00000496205 SIRT1Q96EB6 747 aa8.24□□□□□ -1.09
CLK1-214ENST00000496205 PSMG3-AS1Q96PY0 264 aa8.24□□□□□ -1.09
CLK1-214ENST00000496205 ZIC5Q96T25 663 aa8.24□□□□□ -1.09
CLK1-214ENST00000496205 PLVAPQ9BX97 442 aa8.24□□□□□ -1.09
CLK1-214ENST00000496205 STRN4Q9NRL3 753 aa8.24□□□□□ -1.09
CLK1-214ENST00000496205 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.23□□□□□ -1.09
CLK1-214ENST00000496205 TMEM229AB2RXF0 380 aa8.23□□□□□ -1.09
CLK1-214ENST00000496205 VAC14Q08AM6 782 aa8.23□□□□□ -1.09
CLK1-214ENST00000496205 AVENQ9NQS1 362 aaPredicted RBP8.23□□□□□ -1.09
CLK1-214ENST00000496205 SLC4A9Q96Q91 983 aa8.22□□□□□ -1.09
CLK1-214ENST00000496205 KRTAP9-2Q9BYQ4 174 aa8.22□□□□□ -1.09
CLK1-214ENST00000496205 A6NJY4 79 aa8.21□□□□□ -1.1
CLK1-214ENST00000496205 CDK2AP1O14519 115 aa8.21□□□□□ -1.1
CLK1-214ENST00000496205 MTFR1Q15390 333 aa8.21□□□□□ -1.1
CLK1-214ENST00000496205 ZNF468Q5VIY5 522 aaPredicted RBP8.21□□□□□ -1.1
CLK1-214ENST00000496205 PLPP7Q8NBV4 271 aa8.21□□□□□ -1.1
CLK1-214ENST00000496205 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
CLK1-214ENST00000496205 FAM157BP0CG42 384 aa8.2□□□□□ -1.1
CLK1-214ENST00000496205 GATA4P43694 442 aa8.2□□□□□ -1.1
CLK1-214ENST00000496205 NBPF1Q3BBV0 1214 aa8.2□□□□□ -1.1
CLK1-214ENST00000496205 ZDHHC3Q9NYG2 299 aa8.2□□□□□ -1.1
CLK1-214ENST00000496205 PRR12Q9ULL5 1215 aa8.2□□□□□ -1.1
CLK1-214ENST00000496205 EFSO43281 561 aa8.19□□□□□ -1.1
CLK1-214ENST00000496205 MAP7D1Q3KQU3 841 aa8.19□□□□□ -1.1
CLK1-214ENST00000496205 CABP1Q9NZU7 370 aa8.19□□□□□ -1.1
CLK1-214ENST00000496205 MARK1Q9P0L2 795 aa8.19□□□□□ -1.1
CLK1-214ENST00000496205 KRTAP9-6A0A140TA67 174 aa8.18□□□□□ -1.1
CLK1-214ENST00000496205 SPATA31C1P0DKV0 1188 aa8.18□□□□□ -1.1
CLK1-214ENST00000496205 TATP17735 454 aaPredicted RBP8.18□□□□□ -1.1
CLK1-214ENST00000496205 RSPO4Q2I0M5 234 aaPredicted RBP8.18□□□□□ -1.1
CLK1-214ENST00000496205 FOXD4L6Q3SYB3 417 aaPredicted RBP8.18□□□□□ -1.1
CLK1-214ENST00000496205 ZMYM1Q5SVZ6 1142 aa8.18□□□□□ -1.1
CLK1-214ENST00000496205 SAMD5Q5TGI4 173 aa8.18□□□□□ -1.1
CLK1-214ENST00000496205 FOXD4L3Q6VB84 417 aaPredicted RBP8.18□□□□□ -1.1
CLK1-214ENST00000496205 MDFIQ99750 246 aa8.18□□□□□ -1.1
CLK1-214ENST00000496205 PCDHGA11Q9Y5H2 935 aa8.18□□□□□ -1.1
CLK1-214ENST00000496205 TXLNAP40222 546 aa8.17□□□□□ -1.1
CLK1-214ENST00000496205 GDPD2Q9HCC8 539 aa8.17□□□□□ -1.1
CLK1-214ENST00000496205 GJA3Q9Y6H8 435 aa8.17□□□□□ -1.1
CLK1-214ENST00000496205 ELOA3CA0A087WX78 387 aaPredicted RBP8.16□□□□□ -1.1
CLK1-214ENST00000496205 ELOA3DA6NLF2 546 aaPredicted RBP8.16□□□□□ -1.1
CLK1-214ENST00000496205 COL9A3Q14050 684 aaPredicted RBP8.16□□□□□ -1.1
CLK1-214ENST00000496205 ELOA3BQ3SY89 546 aa8.16□□□□□ -1.1
CLK1-214ENST00000496205 NKAPLQ5M9Q1 402 aa8.16□□□□□ -1.1
CLK1-214ENST00000496205 SYT9Q86SS6 491 aa8.16□□□□□ -1.1
CLK1-214ENST00000496205 ELOA3Q8NG57 546 aa8.16□□□□□ -1.1
CLK1-214ENST00000496205 ZDHHC1Q8WTX9 485 aa8.16□□□□□ -1.1
CLK1-214ENST00000496205 PIK3CDO00329 1044 aa8.15□□□□□ -1.1
CLK1-214ENST00000496205 BICDL1Q6ZP65 573 aa8.15□□□□□ -1.1
CLK1-214ENST00000496205 PRM3Q9NNZ6 103 aa8.15□□□□□ -1.1
CLK1-214ENST00000496205 TPSG1Q9NRR2 321 aa8.15□□□□□ -1.1
CLK1-214ENST00000496205 FAM229AH3BQW9 127 aa8.14□□□□□ -1.11
CLK1-214ENST00000496205 ABL2P42684 1182 aa8.14□□□□□ -1.11
CLK1-214ENST00000496205 LAMC2Q13753 1193 aa8.14□□□□□ -1.11
CLK1-214ENST00000496205 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
CLK1-214ENST00000496205 ALAS2P22557 587 aa8.13□□□□□ -1.11
CLK1-214ENST00000496205 LRRC69Q6ZNQ3 347 aa8.13□□□□□ -1.11
CLK1-214ENST00000496205 C8orf86Q6ZUL3 223 aa8.13□□□□□ -1.11
CLK1-214ENST00000496205 STARD13Q9Y3M8 1113 aa8.13□□□□□ -1.11
CLK1-214ENST00000496205 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
CLK1-214ENST00000496205 SEMA3FQ13275 785 aa8.12□□□□□ -1.11
CLK1-214ENST00000496205 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
CLK1-214ENST00000496205 L3MBTL2Q969R5 705 aa8.12□□□□□ -1.11
CLK1-214ENST00000496205 SLC30A3Q99726 388 aa8.12□□□□□ -1.11
CLK1-214ENST00000496205 SCHIP1Q9P0W5 487 aaPredicted RBP8.12□□□□□ -1.11
CLK1-214ENST00000496205 ADARB2-AS1A8MUL3 147 aa8.11□□□□□ -1.11
CLK1-214ENST00000496205 M0R082 166 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms