RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 ERC1Q8IUD2 1116 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 VPS72Q15906 364 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 LRRFIP1Q32MZ4 808 aaKnown RBP11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 ZNF622Q969S3 477 aaKnown RBP eCLIP11.62□□□□□ -0.552e-7■□□□□ 10
GAPVD1-219ENST00000495955 CCDC87Q9NVE4 849 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 BABAM1Q9NWV8 329 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 PARP3Q9Y6F1 533 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 A1BGP04217 495 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 BECN1Q14457 450 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 TOMM22Q9NS69 142 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 UBE3BQ7Z3V4 1068 aa11.62□□□□□ -0.55
GAPVD1-219ENST00000495955 ARHGEF28Q8N1W1 1705 aaKnown RBP11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 DDRGK1Q96HY6 314 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 ERC2O15083 957 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 TRIM27P14373 513 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 ASAP1Q9ULH1 1129 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 CHL1O00533 1208 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 KCNQ3O43525 872 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 IFIT5Q13325 482 aaKnown RBP11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 PLEKHF1Q96S99 279 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 DIAPH3Q9NSV4 1193 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 PNPLA6Q8IY17 1366 aa11.61□□□□□ -0.55
GAPVD1-219ENST00000495955 KSR2Q6VAB6 950 aa11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 VAMP4O75379 141 aa11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 USP19O94966 1318 aa11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 TTC39AQ5SRH9 613 aa11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 GNL3LQ9NVN8 582 aaKnown RBP11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 ANKIB1Q9P2G1 1089 aa11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 CEP126Q9P2H0 1117 aa11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 MFAP1P55081 439 aaKnown RBP11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 CCDC158Q5M9N0 1113 aa11.6□□□□□ -0.55
GAPVD1-219ENST00000495955 DDX46Q7L014 1031 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 DNAJC2Q99543 621 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 PHAXQ9H814 394 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 LRRFIP2Q9Y608 721 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 LOC102724428A0A0B4J2F2 783 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 SIK1P57059 783 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 EIF4A1P60842 406 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 METTL24Q5JXM2 366 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 MRPL50Q8N5N7 158 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 UTP14AQ9BVJ6 771 aaKnown RBP11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 DDX21Q9NR30 783 aaKnown RBP eCLIP11.59□□□□□ -0.553e-6■□□□□ 8.6
GAPVD1-219ENST00000495955 ANKRD18BA2A2Z9 1011 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 APPP05067 770 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 TRIM34Q9BYJ4 488 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 OVOS2A0A0J9YW53 1432 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 OVOS2Q6IE36 1432 aa11.59□□□□□ -0.55
GAPVD1-219ENST00000495955 SPATA31A1Q5TZJ5 1347 aa11.58□□□□□ -0.55
GAPVD1-219ENST00000495955 KCNQ4P56696 695 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 SPINK5Q9NQ38 1064 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 TPTE2Q6XPS3 522 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 NYXQ9GZU5 481 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 ITSN1Q15811 1721 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 CYP27B1O15528 508 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 AMOTL1Q8IY63 956 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 LRRCC1Q9C099 1032 aa11.58□□□□□ -0.56
GAPVD1-219ENST00000495955 C20orf194Q5TEA3 1177 aa11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 WASHC4Q2M389 1173 aa11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 RPAP2Q8IXW5 612 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 SSH2Q76I76 1423 aa11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 PIGBQ92521 554 aa11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 NLRP3Q96P20 1036 aa11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 SOS1Q07889 1333 aaPredicted RBP11.57□□□□□ -0.56
GAPVD1-219ENST00000495955 HOXB7P09629 217 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 AACSQ86V21 672 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 CDC5LQ99459 802 aaKnown RBP11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 CCDC152Q4G0S7 254 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 FAM161AQ3B820 660 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 IL1RAPL2Q9NP60 686 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 SPATA31A5Q5VU36 1347 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 SPATA31A7Q8IWB4 1347 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 CWF19L2Q2TBE0 894 aaKnown RBP11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 EXOC6BQ9Y2D4 811 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 USP16Q9Y5T5 823 aa11.56□□□□□ -0.56
GAPVD1-219ENST00000495955 RUFY2Q8WXA3 655 aa11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 GIGYF1O75420 1035 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 MSL1Q68DK7 614 aa11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 OVOS2A0A0G2JMS6 1433 aa11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 PLBD2Q8NHP8 589 aa11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 ARHGAP45Q92619 1136 aa11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 FSD1Q9BTV5 496 aa11.55□□□□□ -0.56
GAPVD1-219ENST00000495955 C6orf229H3BNL8 230 aa11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 G2E3Q7L622 706 aa11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 CNBD1Q8NA66 436 aa11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 GRM8O00222 908 aa11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 CRKLP46109 303 aaKnown RBP11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 LDHAL6AQ6ZMR3 332 aa11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 ALDH1L1O75891 902 aa11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 RBM5P52756 815 aaKnown RBP eCLIP11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 LINS1Q8NG48 757 aa11.54□□□□□ -0.56
GAPVD1-219ENST00000495955 FKBP4Q02790 459 aaKnown RBP eCLIP11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 PALLDQ8WX93 1383 aa11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 IRS4O14654 1257 aaPredicted RBP11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 IFIT1P09914 478 aaKnown RBP11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 CAVIN4Q5BKX8 364 aa11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 FLAD1Q8NFF5 587 aa11.53□□□□□ -0.56
GAPVD1-219ENST00000495955 AKAP2Q9Y2D5 859 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms