RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 C1orf115Q9H7X2 142 aa25.23■■□□□ 1.63
LINC01558-202ENST00000495520 CABP4P57796 275 aa25.23■■□□□ 1.63
LINC01558-202ENST00000495520 FKBP5Q13451 457 aaPredicted RBP25.23■■□□□ 1.63
LINC01558-202ENST00000495520 NFATC2IPQ8NCF5 419 aa25.23■■□□□ 1.63
LINC01558-202ENST00000495520 GCC1Q96CN9 775 aa25.23■■□□□ 1.63
LINC01558-202ENST00000495520 THSD7AQ9UPZ6 1657 aa25.22■■□□□ 1.63
LINC01558-202ENST00000495520 ATP10DQ9P241 1426 aa25.21■■□□□ 1.63
LINC01558-202ENST00000495520 EIF2S2P20042 333 aaKnown RBP25.21■■□□□ 1.63
LINC01558-202ENST00000495520 NUCB1Q02818 461 aa25.21■■□□□ 1.63
LINC01558-202ENST00000495520 C8orf34Q49A92 452 aa25.21■■□□□ 1.63
LINC01558-202ENST00000495520 RPAP2Q8IXW5 612 aaPredicted RBP25.21■■□□□ 1.63
LINC01558-202ENST00000495520 ANKRD44Q8N8A2 993 aa25.2■■□□□ 1.63
LINC01558-202ENST00000495520 MARCH10Q8NA82 808 aaPredicted RBP25.2■■□□□ 1.63
LINC01558-202ENST00000495520 CHPF2Q9P2E5 772 aa25.2■■□□□ 1.63
LINC01558-202ENST00000495520 N4BP2Q86UW6 1770 aaPredicted RBP25.2■■□□□ 1.62
LINC01558-202ENST00000495520 MEIS3Q99687 375 aa25.2■■□□□ 1.62
LINC01558-202ENST00000495520 PHAXQ9H814 394 aaKnown RBP25.2■■□□□ 1.62
LINC01558-202ENST00000495520 DBF4Q9UBU7 674 aaPredicted RBP25.2■■□□□ 1.62
LINC01558-202ENST00000495520 TOGARAM1Q9Y4F4 1720 aa25.19■■□□□ 1.62
LINC01558-202ENST00000495520 ERVV-2B6SEH9 535 aa25.19■■□□□ 1.62
LINC01558-202ENST00000495520 SLC4A10Q6U841 1118 aa25.18■■□□□ 1.62
LINC01558-202ENST00000495520 ONECUT3O60422 494 aaPredicted RBP25.17■■□□□ 1.62
LINC01558-202ENST00000495520 CEP85Q6P2H3 762 aa25.17■■□□□ 1.62
LINC01558-202ENST00000495520 SLC39A6Q13433 755 aa25.16■■□□□ 1.62
LINC01558-202ENST00000495520 SEPT12Q8IYM1 358 aa25.16■■□□□ 1.62
LINC01558-202ENST00000495520 DCTPP1Q9H773 170 aa25.16■■□□□ 1.62
LINC01558-202ENST00000495520 PRAMEF22A3QJZ6 481 aa25.13■■□□□ 1.61
LINC01558-202ENST00000495520 RBM6P78332 1123 aaKnown RBP25.13■■□□□ 1.61
LINC01558-202ENST00000495520 CHD1LQ86WJ1 897 aa25.13■■□□□ 1.61
LINC01558-202ENST00000495520 TMOD3Q9NYL9 352 aa25.13■■□□□ 1.61
LINC01558-202ENST00000495520 PDIA6Q15084 440 aa25.13■■□□□ 1.61
LINC01558-202ENST00000495520 SYTL4Q96C24 671 aaPredicted RBP25.13■■□□□ 1.61
LINC01558-202ENST00000495520 ZNF496Q96IT1 587 aaPredicted RBP25.13■■□□□ 1.61
LINC01558-202ENST00000495520 DDX21Q9NR30 783 aaKnown RBP eCLIP25.13■■□□□ 1.61
LINC01558-202ENST00000495520 HYPKQ9NX55 129 aa25.13■■□□□ 1.61
LINC01558-202ENST00000495520 DOT1LQ8TEK3 1739 aa25.13■■□□□ 1.61
LINC01558-202ENST00000495520 GNAI3P08754 354 aa25.12■■□□□ 1.61
LINC01558-202ENST00000495520 RGS17Q9UGC6 210 aaPredicted RBP25.11■■□□□ 1.61
LINC01558-202ENST00000495520 ADCY9O60503 1353 aa25.11■■□□□ 1.61
LINC01558-202ENST00000495520 GNAI2P04899 355 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 SNRPA1P09661 255 aaKnown RBP25.1■■□□□ 1.61
LINC01558-202ENST00000495520 PROSER3Q2NL68 480 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 ILDR1Q86SU0 546 aaPredicted RBP25.1■■□□□ 1.61
LINC01558-202ENST00000495520 TTC5Q8N0Z6 440 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 DNAAF4Q8WXU2 420 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 ACSBG1Q96GR2 724 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 FMNL2Q96PY5 1086 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 BEND3Q5T5X7 828 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 USP44Q9H0E7 712 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 ITGB4P16144 1822 aa25.1■■□□□ 1.61
LINC01558-202ENST00000495520 PI4KAP2A4QPH2 592 aa25.09■■□□□ 1.61
LINC01558-202ENST00000495520 ANXA1P04083 346 aa25.09■■□□□ 1.61
LINC01558-202ENST00000495520 PRIM1P49642 420 aaKnown RBP25.09■■□□□ 1.61
LINC01558-202ENST00000495520 FAM182BQ5T319 152 aa25.09■■□□□ 1.61
LINC01558-202ENST00000495520 PI4KAP1Q8N8J0 262 aa25.09■■□□□ 1.61
LINC01558-202ENST00000495520 C5P01031 1676 aa25.08■■□□□ 1.61
LINC01558-202ENST00000495520 PIGBQ92521 554 aa25.08■■□□□ 1.61
LINC01558-202ENST00000495520 SRCIN1Q9C0H9 1055 aa25.08■■□□□ 1.61
LINC01558-202ENST00000495520 RXRBP28702 533 aa25.07■■□□□ 1.6
LINC01558-202ENST00000495520 KSR2Q6VAB6 950 aa25.07■■□□□ 1.6
LINC01558-202ENST00000495520 ANKRD45Q5TZF3 282 aa25.07■■□□□ 1.6
LINC01558-202ENST00000495520 KAT6BQ8WYB5 2073 aa25.06■■□□□ 1.6
LINC01558-202ENST00000495520 LNPKQ9C0E8 428 aa25.06■■□□□ 1.6
LINC01558-202ENST00000495520 IBTKQ9P2D0 1353 aaPredicted RBP25.06■■□□□ 1.6
LINC01558-202ENST00000495520 BCL9O00512 1426 aa25.06■■□□□ 1.6
LINC01558-202ENST00000495520 HMMRO75330 724 aa25.05■■□□□ 1.6
LINC01558-202ENST00000495520 LRP10Q7Z4F1 713 aa25.05■■□□□ 1.6
LINC01558-202ENST00000495520 PAPPAQ13219 1627 aa25.05■■□□□ 1.6
LINC01558-202ENST00000495520 ATP8B2P98198 1209 aa25.04■■□□□ 1.6
LINC01558-202ENST00000495520 POTEAQ6S8J7 498 aa25.04■■□□□ 1.6
LINC01558-202ENST00000495520 USP16Q9Y5T5 823 aa25.04■■□□□ 1.6
LINC01558-202ENST00000495520 UBR2Q8IWV8 1755 aa25.03■■□□□ 1.6
LINC01558-202ENST00000495520 ALDH1L1O75891 902 aa25.03■■□□□ 1.6
LINC01558-202ENST00000495520 ANP32AP39687 249 aaKnown RBP25.03■■□□□ 1.6
LINC01558-202ENST00000495520 ASAP1Q9ULH1 1129 aa25.03■■□□□ 1.6
LINC01558-202ENST00000495520 BRWD3Q6RI45 1802 aa25.02■■□□□ 1.6
LINC01558-202ENST00000495520 KCNQ2O43526 872 aa25.02■■□□□ 1.6
LINC01558-202ENST00000495520 KRT27Q7Z3Y8 459 aa25.02■■□□□ 1.6
LINC01558-202ENST00000495520 DDX58O95786 925 aaKnown RBP25.01■■□□□ 1.59
LINC01558-202ENST00000495520 ATG3Q9NT62 314 aa25.01■■□□□ 1.59
LINC01558-202ENST00000495520 MAP3K2Q9Y2U5 619 aa25.01■■□□□ 1.59
LINC01558-202ENST00000495520 KCPQ6ZWJ8 1503 aa25.01■■□□□ 1.59
LINC01558-202ENST00000495520 ERBB4Q15303 1308 aa25.01■■□□□ 1.59
LINC01558-202ENST00000495520 PTCD1O75127 700 aaKnown RBP25.01■■□□□ 1.59
LINC01558-202ENST00000495520 UBTFL1P0CB47 393 aaPredicted RBP25.01■■□□□ 1.59
LINC01558-202ENST00000495520 LRRFIP2Q9Y608 721 aaKnown RBP24.99■■□□□ 1.59
LINC01558-202ENST00000495520 LAMB4A4D0S4 1761 aa24.98■■□□□ 1.59
LINC01558-202ENST00000495520 MSH5O43196 834 aa24.97■■□□□ 1.59
LINC01558-202ENST00000495520 LINS1Q8NG48 757 aa24.97■■□□□ 1.59
LINC01558-202ENST00000495520 BMP2KLQ5H9B9 411 aa24.96■■□□□ 1.59
LINC01558-202ENST00000495520 SSH3Q8TE77 659 aa24.96■■□□□ 1.59
LINC01558-202ENST00000495520 IPO9Q96P70 1041 aaKnown RBP24.96■■□□□ 1.59
LINC01558-202ENST00000495520 UTYO14607 1347 aa24.96■■□□□ 1.59
LINC01558-202ENST00000495520 PNMA6EA0A0J9YXQ4 647 aa24.95■■□□□ 1.58
LINC01558-202ENST00000495520 NBPF7P0C2Y1 421 aaPredicted RBP24.95■■□□□ 1.58
LINC01558-202ENST00000495520 XAGE3Q8WTP9 111 aa24.95■■□□□ 1.58
LINC01558-202ENST00000495520 RBM42Q9BTD8 480 aaKnown RBP24.95■■□□□ 1.58
LINC01558-202ENST00000495520 NHSQ6T4R5 1651 aa24.95■■□□□ 1.58
LINC01558-202ENST00000495520 POLA2Q14181 598 aa24.94■■□□□ 1.58
LINC01558-202ENST00000495520 COPS6Q7L5N1 327 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms