RNA–Protein interactions for RNA: ENST00000494934.5

SRRM1-218, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-218ENST00000494934 BACH1O14867 736 aa9.16□□□□□ -0.94
SRRM1-218ENST00000494934 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
SRRM1-218ENST00000494934 FKBP5Q13451 457 aaPredicted RBP9.16□□□□□ -0.94
SRRM1-218ENST00000494934 TLR1Q15399 786 aa9.16□□□□□ -0.94
SRRM1-218ENST00000494934 TRIM47Q96LD4 638 aa9.16□□□□□ -0.94
SRRM1-218ENST00000494934 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
SRRM1-218ENST00000494934 SEPT3Q9UH03 358 aa9.16□□□□□ -0.94
SRRM1-218ENST00000494934 RBM19Q9Y4C8 960 aaKnown RBP9.16□□□□□ -0.94
SRRM1-218ENST00000494934 FIGNL2A6NMB9 653 aa9.15□□□□□ -0.94
SRRM1-218ENST00000494934 CDK2AP1O14519 115 aa9.15□□□□□ -0.94
SRRM1-218ENST00000494934 WEE1P30291 646 aa9.15□□□□□ -0.94
SRRM1-218ENST00000494934 TBCELQ5QJ74 424 aa9.15□□□□□ -0.94
SRRM1-218ENST00000494934 PPARGC1BQ86YN6 1023 aaKnown RBP9.15□□□□□ -0.94
SRRM1-218ENST00000494934 HINFPQ9BQA5 517 aa9.15□□□□□ -0.94
SRRM1-218ENST00000494934 TSPAN10Q9H1Z9 355 aaPredicted RBP9.15□□□□□ -0.94
SRRM1-218ENST00000494934 ANO2Q9NQ90 1003 aa9.15□□□□□ -0.94
SRRM1-218ENST00000494934 SPATA31C2B4DYI2 1134 aa9.14□□□□□ -0.95
SRRM1-218ENST00000494934 POTEAQ6S8J7 498 aa9.14□□□□□ -0.95
SRRM1-218ENST00000494934 ZDHHC1Q8WTX9 485 aa9.14□□□□□ -0.95
SRRM1-218ENST00000494934 H3BRB1 525 aa9.13□□□□□ -0.95
SRRM1-218ENST00000494934 ABL1P00519 1130 aa9.13□□□□□ -0.95
SRRM1-218ENST00000494934 SLC9A9Q8IVB4 645 aa9.13□□□□□ -0.95
SRRM1-218ENST00000494934 ZSCAN10Q96SZ4 725 aaPredicted RBP9.13□□□□□ -0.95
SRRM1-218ENST00000494934 TUT1Q9H6E5 874 aaKnown RBP9.13□□□□□ -0.95
SRRM1-218ENST00000494934 AMOTL2Q9Y2J4 779 aa9.13□□□□□ -0.95
SRRM1-218ENST00000494934 UNCXA6NJT0 531 aa9.12□□□□□ -0.95
SRRM1-218ENST00000494934 POU4F2Q12837 409 aa9.12□□□□□ -0.95
SRRM1-218ENST00000494934 ECM1Q16610 540 aa9.12□□□□□ -0.95
SRRM1-218ENST00000494934 C4orf17Q53FE4 359 aa9.12□□□□□ -0.95
SRRM1-218ENST00000494934 SH3PXD2AQ5TCZ1 1133 aa9.12□□□□□ -0.95
SRRM1-218ENST00000494934 PRICKLE2Q7Z3G6 844 aa9.12□□□□□ -0.95
SRRM1-218ENST00000494934 DNMT3AQ9Y6K1 912 aaPredicted RBP9.12□□□□□ -0.95
SRRM1-218ENST00000494934 SENP3-EIF4A1A0A087X0R7 540 aa9.11□□□□□ -0.95
SRRM1-218ENST00000494934 MTMR3Q13615 1198 aa9.11□□□□□ -0.95
SRRM1-218ENST00000494934 NBPF10Q6P3W6 841 aaKnown RBP9.11□□□□□ -0.95
SRRM1-218ENST00000494934 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
SRRM1-218ENST00000494934 NBPF15Q8N660 670 aa9.11□□□□□ -0.95
SRRM1-218ENST00000494934 SENP2Q9HC62 589 aa9.11□□□□□ -0.95
SRRM1-218ENST00000494934 BIN2Q9UBW5 565 aaPredicted RBP9.11□□□□□ -0.95
SRRM1-218ENST00000494934 EGFL7Q9UHF1 273 aa9.11□□□□□ -0.95
SRRM1-218ENST00000494934 ICMTO60725 284 aa9.1□□□□□ -0.95
SRRM1-218ENST00000494934 RHOQP17081 205 aa9.1□□□□□ -0.95
SRRM1-218ENST00000494934 SLC27A3Q5K4L6 730 aa9.1□□□□□ -0.95
SRRM1-218ENST00000494934 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
SRRM1-218ENST00000494934 GTF3C2Q8WUA4 911 aaPredicted RBP9.1□□□□□ -0.95
SRRM1-218ENST00000494934 KIFC2Q96AC6 838 aa9.1□□□□□ -0.95
SRRM1-218ENST00000494934 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
SRRM1-218ENST00000494934 IGFBP4P22692 258 aa9.09□□□□□ -0.95
SRRM1-218ENST00000494934 MARSP56192 900 aaKnown RBP9.09□□□□□ -0.95
SRRM1-218ENST00000494934 TEAD4Q15561 434 aa9.09□□□□□ -0.95
SRRM1-218ENST00000494934 SCG3Q8WXD2 468 aaKnown RBP9.09□□□□□ -0.95
SRRM1-218ENST00000494934 EML1O00423 815 aa9.08□□□□□ -0.96
SRRM1-218ENST00000494934 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.08□□□□□ -0.962e-19■■■■□ 22.9
SRRM1-218ENST00000494934 C7orf43Q8WVR3 580 aa9.08□□□□□ -0.96
SRRM1-218ENST00000494934 C2orf49Q9BVC5 232 aaPredicted RBP9.08□□□□□ -0.96
SRRM1-218ENST00000494934 PARP3Q9Y6F1 533 aa9.08□□□□□ -0.96
SRRM1-218ENST00000494934 C11orf95C9JLR9 678 aaPredicted RBP9.07□□□□□ -0.96
SRRM1-218ENST00000494934 MAN1A2O60476 641 aa9.07□□□□□ -0.96
SRRM1-218ENST00000494934 PHKA2P46019 1235 aa9.07□□□□□ -0.96
SRRM1-218ENST00000494934 WDR44Q5JSH3 913 aa9.07□□□□□ -0.96
SRRM1-218ENST00000494934 TMEM214Q6NUQ4 689 aaKnown RBP9.07□□□□□ -0.96
SRRM1-218ENST00000494934 STAG2Q8N3U4 1231 aa9.07□□□□□ -0.96
SRRM1-218ENST00000494934 KLRG1Q96E93 195 aa9.07□□□□□ -0.96
SRRM1-218ENST00000494934 RBM47A0AV96 593 aaKnown RBP9.06□□□□□ -0.96
SRRM1-218ENST00000494934 SLC35F4A4IF30 521 aa9.06□□□□□ -0.96
SRRM1-218ENST00000494934 NOS2P35228 1153 aa9.06□□□□□ -0.96
SRRM1-218ENST00000494934 PTSQ03393 145 aa9.06□□□□□ -0.96
SRRM1-218ENST00000494934 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
SRRM1-218ENST00000494934 GLYCTKQ8IVS8 523 aa9.06□□□□□ -0.96
SRRM1-218ENST00000494934 PPP1R12BO60237 982 aaPredicted RBP9.05□□□□□ -0.96
SRRM1-218ENST00000494934 TXLNAP40222 546 aa9.05□□□□□ -0.96
SRRM1-218ENST00000494934 HIRAP54198 1017 aaPredicted RBP9.05□□□□□ -0.96
SRRM1-218ENST00000494934 PSMA6P60900 246 aaKnown RBP9.05□□□□□ -0.96
SRRM1-218ENST00000494934 ARHGAP4P98171 946 aa9.05□□□□□ -0.96
SRRM1-218ENST00000494934 NAA30Q147X3 362 aaPredicted RBP9.05□□□□□ -0.96
SRRM1-218ENST00000494934 L3MBTL2Q969R5 705 aa9.05□□□□□ -0.96
SRRM1-218ENST00000494934 NIFKQ9BYG3 293 aaKnown RBP9.05□□□□□ -0.96
SRRM1-218ENST00000494934 CABP1Q9NZU7 370 aa9.05□□□□□ -0.96
SRRM1-218ENST00000494934 E9PSI1 815 aa9.04□□□□□ -0.96
SRRM1-218ENST00000494934 FOXO3O43524 673 aa9.04□□□□□ -0.96
SRRM1-218ENST00000494934 PLA2G4AP47712 749 aa9.04□□□□□ -0.96
SRRM1-218ENST00000494934 GNASQ5JWF2 1037 aa9.04□□□□□ -0.96
SRRM1-218ENST00000494934 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
SRRM1-218ENST00000494934 ANKRD33BA6NCL7 494 aa9.03□□□□□ -0.96
SRRM1-218ENST00000494934 THBS1P07996 1170 aa9.03□□□□□ -0.96
SRRM1-218ENST00000494934 ATP4AP20648 1035 aa9.03□□□□□ -0.96
SRRM1-218ENST00000494934 SERTM1A2A2V5 107 aa9.02□□□□□ -0.97
SRRM1-218ENST00000494934 FKBP4Q02790 459 aaKnown RBP eCLIP9.02□□□□□ -0.97
SRRM1-218ENST00000494934 HELQQ8TDG4 1101 aa9.02□□□□□ -0.97
SRRM1-218ENST00000494934 CHMP7Q8WUX9 453 aaPredicted RBP9.02□□□□□ -0.97
SRRM1-218ENST00000494934 SAP130Q9H0E3 1048 aa9.02□□□□□ -0.97
SRRM1-218ENST00000494934 TIMMDC1Q9NPL8 285 aa9.02□□□□□ -0.97
SRRM1-218ENST00000494934 CUEDC1Q9NWM3 386 aaPredicted RBP9.02□□□□□ -0.97
SRRM1-218ENST00000494934 PTCD1O75127 700 aaKnown RBP9.01□□□□□ -0.97
SRRM1-218ENST00000494934 ZNF16P17020 682 aaPredicted RBP9.01□□□□□ -0.97
SRRM1-218ENST00000494934 ERCC3P19447 782 aa9.01□□□□□ -0.97
SRRM1-218ENST00000494934 SF3B2Q13435 895 aaKnown RBP9.01□□□□□ -0.97
SRRM1-218ENST00000494934 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
SRRM1-218ENST00000494934 KIAA1522Q9P206 1035 aaPredicted RBP9.01□□□□□ -0.97
SRRM1-218ENST00000494934 HCN4Q9Y3Q4 1203 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms