RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PRAMEF22A3QJZ6 481 aa19.44■□□□□ 0.7
ATG4B-224ENST00000494132 MMP10P09238 476 aa19.44■□□□□ 0.7
ATG4B-224ENST00000494132 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
ATG4B-224ENST00000494132 FMNL2Q96PY5 1086 aa19.44■□□□□ 0.7
ATG4B-224ENST00000494132 COL15A1P39059 1388 aa19.44■□□□□ 0.7
ATG4B-224ENST00000494132 LAMB4A4D0S4 1761 aa19.43■□□□□ 0.7
ATG4B-224ENST00000494132 N4BP2Q86UW6 1770 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-224ENST00000494132 DCAF8L1A6NGE4 600 aa19.43■□□□□ 0.7
ATG4B-224ENST00000494132 CHD4Q14839 1912 aa19.43■□□□□ 0.7
ATG4B-224ENST00000494132 KIF13BQ9NQT8 1826 aa19.42■□□□□ 0.7
ATG4B-224ENST00000494132 RIPK4P57078 832 aa19.42■□□□□ 0.7
ATG4B-224ENST00000494132 NEUROD2Q15784 382 aa19.42■□□□□ 0.7
ATG4B-224ENST00000494132 ADAMTS8Q9UP79 889 aa19.42■□□□□ 0.7
ATG4B-224ENST00000494132 ZNF330Q9Y3S2 320 aaPredicted RBP19.42■□□□□ 0.7
ATG4B-224ENST00000494132 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
ATG4B-224ENST00000494132 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
ATG4B-224ENST00000494132 STARD3NLO95772 234 aa19.41■□□□□ 0.7
ATG4B-224ENST00000494132 PIP4K2AP48426 406 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-224ENST00000494132 FKBP8Q14318 412 aa19.41■□□□□ 0.7
ATG4B-224ENST00000494132 TAF7Q15545 349 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-224ENST00000494132 CCDC184Q52MB2 194 aa19.41■□□□□ 0.7
ATG4B-224ENST00000494132 WWC3Q9ULE0 1092 aa19.41■□□□□ 0.7
ATG4B-224ENST00000494132 KIAA1551Q9HCM1 1747 aa19.4■□□□□ 0.7
ATG4B-224ENST00000494132 A1BGP04217 495 aa19.4■□□□□ 0.7
ATG4B-224ENST00000494132 TMPOP42166 694 aaKnown RBP19.4■□□□□ 0.7
ATG4B-224ENST00000494132 USPL1Q5W0Q7 1092 aa19.4■□□□□ 0.7
ATG4B-224ENST00000494132 NLGN1Q8N2Q7 840 aa19.4■□□□□ 0.7
ATG4B-224ENST00000494132 USP16Q9Y5T5 823 aa19.39■□□□□ 0.69
ATG4B-224ENST00000494132 SCN7AQ01118 1682 aa19.39■□□□□ 0.69
ATG4B-224ENST00000494132 ZPR1O75312 459 aa19.38■□□□□ 0.69
ATG4B-224ENST00000494132 GPR162Q16538 588 aa19.38■□□□□ 0.69
ATG4B-224ENST00000494132 RUNDC1Q96C34 613 aa19.38■□□□□ 0.69
ATG4B-224ENST00000494132 BCORQ6W2J9 1755 aa19.37■□□□□ 0.69
ATG4B-224ENST00000494132 TEX13AQ9BXU3 409 aaPredicted RBP19.37■□□□□ 0.69
ATG4B-224ENST00000494132 CD2APQ9Y5K6 639 aa19.37■□□□□ 0.69
ATG4B-224ENST00000494132 DDR1Q08345 913 aa19.36■□□□□ 0.69
ATG4B-224ENST00000494132 NARFQ9UHQ1 456 aa19.36■□□□□ 0.69
ATG4B-224ENST00000494132 PARP3Q9Y6F1 533 aa19.36■□□□□ 0.69
ATG4B-224ENST00000494132 SNRPA1P09661 255 aaKnown RBP19.35■□□□□ 0.69
ATG4B-224ENST00000494132 EIF5P55010 431 aaKnown RBP19.35■□□□□ 0.69
ATG4B-224ENST00000494132 BCL2L12Q9HB09 334 aa19.35■□□□□ 0.69
ATG4B-224ENST00000494132 TBC1D2BQ9UPU7 963 aa19.35■□□□□ 0.69
ATG4B-224ENST00000494132 UTRNP46939 3433 aa19.35■□□□□ 0.69
ATG4B-224ENST00000494132 SENP3-EIF4A1A0A087X0R7 540 aa19.34■□□□□ 0.69
ATG4B-224ENST00000494132 YBX3P16989 372 aaKnown RBP eCLIP19.34■□□□□ 0.69
ATG4B-224ENST00000494132 BRCA1P38398 1863 aaKnown RBP19.34■□□□□ 0.69
ATG4B-224ENST00000494132 C10orf71Q711Q0 1435 aa19.34■□□□□ 0.69
ATG4B-224ENST00000494132 ANP32CO43423 234 aa19.33■□□□□ 0.68
ATG4B-224ENST00000494132 PNISRQ8TF01 805 aaKnown RBP19.33■□□□□ 0.68
ATG4B-224ENST00000494132 IL6STP40189 918 aaPredicted RBP19.32■□□□□ 0.68
ATG4B-224ENST00000494132 EIF4A1P60842 406 aaKnown RBP19.32■□□□□ 0.68
ATG4B-224ENST00000494132 BICDL1Q6ZP65 573 aa19.32■□□□□ 0.68
ATG4B-224ENST00000494132 TSPYL4Q9UJ04 414 aa19.32■□□□□ 0.68
ATG4B-224ENST00000494132 TRIM35Q9UPQ4 493 aa19.32■□□□□ 0.68
ATG4B-224ENST00000494132 PXDNLA1KZ92 1463 aa19.32■□□□□ 0.68
ATG4B-224ENST00000494132 NRXN2Q9P2S2 1712 aa19.31■□□□□ 0.68
ATG4B-224ENST00000494132 POLRMTO00411 1230 aaKnown RBP19.31■□□□□ 0.68
ATG4B-224ENST00000494132 YY1P25490 414 aa19.31■□□□□ 0.68
ATG4B-224ENST00000494132 LMOD3Q0VAK6 560 aa19.31■□□□□ 0.68
ATG4B-224ENST00000494132 NFIXQ14938 502 aa19.31■□□□□ 0.68
ATG4B-224ENST00000494132 GOLGB1Q14789 3259 aaKnown RBP19.31■□□□□ 0.68
ATG4B-224ENST00000494132 A0A087WZG4 1122 aa19.3■□□□□ 0.68
ATG4B-224ENST00000494132 NBPF26B4DH59 902 aa19.3■□□□□ 0.68
ATG4B-224ENST00000494132 TM4SF1P30408 202 aa19.3■□□□□ 0.68
ATG4B-224ENST00000494132 NBPF10Q6P3W6 841 aaKnown RBP19.3■□□□□ 0.68
ATG4B-224ENST00000494132 NBPF15Q8N660 670 aa19.3■□□□□ 0.68
ATG4B-224ENST00000494132 LAS1LQ9Y4W2 734 aaKnown RBP19.3■□□□□ 0.68
ATG4B-224ENST00000494132 APAF1O14727 1248 aa19.29■□□□□ 0.68
ATG4B-224ENST00000494132 GIGYF1O75420 1035 aaPredicted RBP19.29■□□□□ 0.68
ATG4B-224ENST00000494132 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
ATG4B-224ENST00000494132 MRS2Q9HD23 443 aa19.29■□□□□ 0.68
ATG4B-224ENST00000494132 ANKRD31Q8N7Z5 1873 aa19.28■□□□□ 0.68
ATG4B-224ENST00000494132 NUP98P52948 1817 aa19.28■□□□□ 0.68
ATG4B-224ENST00000494132 A0A0G2JLW4 131 aa19.28■□□□□ 0.68
ATG4B-224ENST00000494132 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
ATG4B-224ENST00000494132 DZIP3Q86Y13 1208 aaKnown RBP19.28■□□□□ 0.68
ATG4B-224ENST00000494132 CAMTA2O94983 1202 aa19.27■□□□□ 0.68
ATG4B-224ENST00000494132 DPEP1P16444 411 aa19.27■□□□□ 0.68
ATG4B-224ENST00000494132 NGEFQ8N5V2 710 aa19.27■□□□□ 0.68
ATG4B-224ENST00000494132 SERPINB2P05120 415 aa19.26■□□□□ 0.67
ATG4B-224ENST00000494132 CACNA1SQ13698 1873 aa19.26■□□□□ 0.67
ATG4B-224ENST00000494132 CARMIL3Q8ND23 1372 aa19.25■□□□□ 0.67
ATG4B-224ENST00000494132 KRT24Q2M2I5 525 aa19.25■□□□□ 0.67
ATG4B-224ENST00000494132 DLEC1Q9Y238 1755 aa19.24■□□□□ 0.67
ATG4B-224ENST00000494132 ARFGEF1Q9Y6D6 1849 aa19.24■□□□□ 0.67
ATG4B-224ENST00000494132 MYL6BP14649 208 aa19.24■□□□□ 0.67
ATG4B-224ENST00000494132 EIF2S2P20042 333 aaKnown RBP19.24■□□□□ 0.67
ATG4B-224ENST00000494132 CHRNA5P30532 468 aa19.24■□□□□ 0.67
ATG4B-224ENST00000494132 TGFB2P61812 414 aa19.24■□□□□ 0.67
ATG4B-224ENST00000494132 CCDC24Q8N4L8 307 aa19.24■□□□□ 0.67
ATG4B-224ENST00000494132 NECTIN2Q92692 538 aa19.24■□□□□ 0.67
ATG4B-224ENST00000494132 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
ATG4B-224ENST00000494132 COL11A2P13942 1736 aaPredicted RBP19.22■□□□□ 0.67
ATG4B-224ENST00000494132 GRIN3BO60391 1043 aa19.22■□□□□ 0.67
ATG4B-224ENST00000494132 CHL1O00533 1208 aa19.21■□□□□ 0.67
ATG4B-224ENST00000494132 ANXA1P04083 346 aa19.21■□□□□ 0.67
ATG4B-224ENST00000494132 KCNA3P22001 575 aa19.2■□□□□ 0.66
ATG4B-224ENST00000494132 TTLL7Q6ZT98 887 aa19.2■□□□□ 0.66
ATG4B-224ENST00000494132 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
ATG4B-224ENST00000494132 HLFQ16534 295 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms