RNA–Protein interactions for RNA: ENST00000493609.1

SMG7-208, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG7, Length 624 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-208ENST00000493609 LOC100996750A0A140TA64 210 aa10.72□□□□□ -0.69
SMG7-208ENST00000493609 PPP1R12BO60237 982 aaPredicted RBP10.72□□□□□ -0.69
SMG7-208ENST00000493609 IGFBP4P22692 258 aa10.72□□□□□ -0.69
SMG7-208ENST00000493609 GPC1P35052 558 aa10.72□□□□□ -0.69
SMG7-208ENST00000493609 FKBP5Q13451 457 aaPredicted RBP10.72□□□□□ -0.69
SMG7-208ENST00000493609 B4GALNT3Q6L9W6 998 aa10.72□□□□□ -0.69
SMG7-208ENST00000493609 TMEM214Q6NUQ4 689 aaKnown RBP10.72□□□□□ -0.69
SMG7-208ENST00000493609 PPARGC1BQ86YN6 1023 aaKnown RBP10.72□□□□□ -0.69
SMG7-208ENST00000493609 KCTD17Q8N5Z5 321 aa10.72□□□□□ -0.69
SMG7-208ENST00000493609 KRTAP4-6Q9BYQ5 205 aa10.72□□□□□ -0.69
SMG7-208ENST00000493609 FIGNL2A6NMB9 653 aa10.71□□□□□ -0.69
SMG7-208ENST00000493609 TRIM26Q12899 539 aaPredicted RBP10.71□□□□□ -0.69
SMG7-208ENST00000493609 PRICKLE2Q7Z3G6 844 aa10.71□□□□□ -0.69
SMG7-208ENST00000493609 RNF217Q8TC41 542 aa10.71□□□□□ -0.69
SMG7-208ENST00000493609 MKNK1Q9BUB5 465 aa10.71□□□□□ -0.69
SMG7-208ENST00000493609 SOS2Q07890 1332 aaPredicted RBP10.7□□□□□ -0.7
SMG7-208ENST00000493609 TTLL8A6PVC2 850 aa10.7□□□□□ -0.7
SMG7-208ENST00000493609 CAPN12Q6ZSI9 719 aa10.7□□□□□ -0.7
SMG7-208ENST00000493609 ZSCAN1Q8NBB4 408 aa10.7□□□□□ -0.7
SMG7-208ENST00000493609 CABP1Q9NZU7 370 aa10.7□□□□□ -0.7
SMG7-208ENST00000493609 PARP3Q9Y6F1 533 aa10.7□□□□□ -0.7
SMG7-208ENST00000493609 MAN1A2O60476 641 aa10.69□□□□□ -0.7
SMG7-208ENST00000493609 GTF2E1P29083 439 aaPredicted RBP10.69□□□□□ -0.7
SMG7-208ENST00000493609 SH3PXD2AQ5TCZ1 1133 aa10.69□□□□□ -0.7
SMG7-208ENST00000493609 TAS1R3Q7RTX0 852 aa10.69□□□□□ -0.7
SMG7-208ENST00000493609 ZNF295-AS1Q8N0V1 137 aa10.69□□□□□ -0.7
SMG7-208ENST00000493609 ZDHHC1Q8WTX9 485 aa10.69□□□□□ -0.7
SMG7-208ENST00000493609 PSMA6P60900 246 aaKnown RBP10.68□□□□□ -0.7
SMG7-208ENST00000493609 POU4F2Q12837 409 aa10.68□□□□□ -0.7
SMG7-208ENST00000493609 NBPF15Q8N660 670 aa10.68□□□□□ -0.7
SMG7-208ENST00000493609 C1orf216Q8TAB5 229 aa10.68□□□□□ -0.7
SMG7-208ENST00000493609 RHBDD1Q8TEB9 315 aa10.68□□□□□ -0.7
SMG7-208ENST00000493609 FOXO3O43524 673 aa10.67□□□□□ -0.7
SMG7-208ENST00000493609 NOS2P35228 1153 aa10.67□□□□□ -0.7
SMG7-208ENST00000493609 PHKA2P46019 1235 aa10.67□□□□□ -0.7
SMG7-208ENST00000493609 KCNA1Q09470 495 aa10.67□□□□□ -0.7
SMG7-208ENST00000493609 C4orf17Q53FE4 359 aa10.67□□□□□ -0.7
SMG7-208ENST00000493609 GNASQ5JWF2 1037 aa10.67□□□□□ -0.7
SMG7-208ENST00000493609 LYSMD3Q7Z3D4 306 aa10.67□□□□□ -0.7
SMG7-208ENST00000493609 C2orf49Q9BVC5 232 aaPredicted RBP10.67□□□□□ -0.7
SMG7-208ENST00000493609 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
SMG7-208ENST00000493609 SERTM1A2A2V5 107 aa10.66□□□□□ -0.7
SMG7-208ENST00000493609 RHOQP17081 205 aa10.66□□□□□ -0.7
SMG7-208ENST00000493609 TEAD4Q15561 434 aa10.66□□□□□ -0.7
SMG7-208ENST00000493609 L3MBTL2Q969R5 705 aa10.66□□□□□ -0.7
SMG7-208ENST00000493609 SEPT3Q9UH03 358 aa10.66□□□□□ -0.7
SMG7-208ENST00000493609 DNMT3LQ9UJW3 386 aa10.66□□□□□ -0.7
SMG7-208ENST00000493609 ZNF232Q9UNY5 417 aa10.66□□□□□ -0.7
SMG7-208ENST00000493609 SPATA31C2B4DYI2 1134 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 EML1O00423 815 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 ARID4AP29374 1257 aaPredicted RBP10.65□□□□□ -0.7
SMG7-208ENST00000493609 PLA2G4AP47712 749 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 NAA30Q147X3 362 aaPredicted RBP10.65□□□□□ -0.7
SMG7-208ENST00000493609 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 VTI1AQ96AJ9 217 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 CHMP3Q9Y3E7 222 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 HCN4Q9Y3Q4 1203 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.7
SMG7-208ENST00000493609 FAM181BA6NEQ2 426 aa10.64□□□□□ -0.71
SMG7-208ENST00000493609 VSIG8P0DPA2 414 aa10.64□□□□□ -0.71
SMG7-208ENST00000493609 NBPF10Q6P3W6 841 aaKnown RBP10.64□□□□□ -0.71
SMG7-208ENST00000493609 STAG2Q8N3U4 1231 aa10.64□□□□□ -0.71
SMG7-208ENST00000493609 ZBTB7CA1YPR0 619 aa10.63□□□□□ -0.71
SMG7-208ENST00000493609 PPFIA3O75145 1194 aa10.62□□□□□ -0.71
SMG7-208ENST00000493609 SERPINB4P48594 390 aa10.62□□□□□ -0.71
SMG7-208ENST00000493609 POTEAQ6S8J7 498 aa10.62□□□□□ -0.71
SMG7-208ENST00000493609 AIDAQ96BJ3 306 aa10.62□□□□□ -0.71
SMG7-208ENST00000493609 NGLY1Q96IV0 654 aa10.62□□□□□ -0.71
SMG7-208ENST00000493609 PTCD1O75127 700 aaKnown RBP10.61□□□□□ -0.71
SMG7-208ENST00000493609 TXLNAP40222 546 aa10.61□□□□□ -0.71
SMG7-208ENST00000493609 CCER1Q8TC90 406 aaPredicted RBP10.61□□□□□ -0.71
SMG7-208ENST00000493609 GNEQ9Y223 722 aaKnown RBP10.61□□□□□ -0.71
SMG7-208ENST00000493609 PATL2C9JE40 543 aaKnown RBP10.6□□□□□ -0.71
SMG7-208ENST00000493609 COL26A1Q96A83 441 aa10.6□□□□□ -0.71
SMG7-208ENST00000493609 SAP130Q9H0E3 1048 aa10.6□□□□□ -0.71
SMG7-208ENST00000493609 ABL1P00519 1130 aa10.59□□□□□ -0.71
SMG7-208ENST00000493609 HIRAP54198 1017 aaPredicted RBP10.59□□□□□ -0.71
SMG7-208ENST00000493609 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.59□□□□□ -0.71
SMG7-208ENST00000493609 ALDH16A1Q8IZ83 802 aa10.59□□□□□ -0.71
SMG7-208ENST00000493609 GTF3C2Q8WUA4 911 aaPredicted RBP10.59□□□□□ -0.71
SMG7-208ENST00000493609 PHACTR1Q9C0D0 580 aa10.59□□□□□ -0.71
SMG7-208ENST00000493609 GZF1Q9H116 711 aaPredicted RBP10.59□□□□□ -0.71
SMG7-208ENST00000493609 QTRT2Q9H974 415 aaKnown RBP10.59□□□□□ -0.71
SMG7-208ENST00000493609 TIMMDC1Q9NPL8 285 aa10.59□□□□□ -0.71
SMG7-208ENST00000493609 ANO2Q9NQ90 1003 aa10.59□□□□□ -0.71
SMG7-208ENST00000493609 WDR44Q5JSH3 913 aa10.58□□□□□ -0.72
SMG7-208ENST00000493609 MTMR7Q9Y216 660 aa10.58□□□□□ -0.72
SMG7-208ENST00000493609 ZNF211Q13398 564 aaPredicted RBP10.57□□□□□ -0.72
SMG7-208ENST00000493609 MTMR3Q13615 1198 aa10.57□□□□□ -0.72
SMG7-208ENST00000493609 COX20Q5RI15 118 aa10.57□□□□□ -0.72
SMG7-208ENST00000493609 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
SMG7-208ENST00000493609 DNMT3AQ9Y6K1 912 aaPredicted RBP10.57□□□□□ -0.72
SMG7-208ENST00000493609 NBPF1Q3BBV0 1214 aa10.56□□□□□ -0.72
SMG7-208ENST00000493609 C16orf46Q6P387 395 aa10.56□□□□□ -0.72
SMG7-208ENST00000493609 LRFN2Q9ULH4 789 aa10.56□□□□□ -0.72
SMG7-208ENST00000493609 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
SMG7-208ENST00000493609 SENP3-EIF4A1A0A087X0R7 540 aa10.54□□□□□ -0.72
SMG7-208ENST00000493609 ATP4AP20648 1035 aa10.54□□□□□ -0.72
SMG7-208ENST00000493609 MSX1P28360 303 aa10.54□□□□□ -0.72
SMG7-208ENST00000493609 ZDHHC3Q9NYG2 299 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms