RNA–Protein interactions for RNA: ENST00000493588.5

NUB1-210, Transcript of negative regulator of ubiquitin like proteins 1, humanhuman

TSL 3

Gene NUB1, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUB1-210ENST00000493588 CD2APQ9Y5K6 639 aa19.5■□□□□ 0.71
NUB1-210ENST00000493588 USP42Q9H9J4 1324 aaKnown RBP19.5■□□□□ 0.71
NUB1-210ENST00000493588 FMNL2Q96PY5 1086 aa19.49■□□□□ 0.71
NUB1-210ENST00000493588 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
NUB1-210ENST00000493588 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
NUB1-210ENST00000493588 CANXP27824 592 aaKnown RBP19.48■□□□□ 0.71
NUB1-210ENST00000493588 HOXD11P31277 338 aaPredicted RBP19.48■□□□□ 0.71
NUB1-210ENST00000493588 TAF7Q15545 349 aaPredicted RBP19.48■□□□□ 0.71
NUB1-210ENST00000493588 ZNF316A6NFI3 1004 aaPredicted RBP19.47■□□□□ 0.71
NUB1-210ENST00000493588 A1BGP04217 495 aa19.47■□□□□ 0.71
NUB1-210ENST00000493588 YBX3P16989 372 aaKnown RBP eCLIP19.47■□□□□ 0.717e-8■□□□□ 8.2
NUB1-210ENST00000493588 EIF5P55010 431 aaKnown RBP19.47■□□□□ 0.71
NUB1-210ENST00000493588 USPL1Q5W0Q7 1092 aa19.47■□□□□ 0.71
NUB1-210ENST00000493588 CCDC146Q8IYE0 955 aa19.47■□□□□ 0.71
NUB1-210ENST00000493588 BCL2L12Q9HB09 334 aa19.47■□□□□ 0.71
NUB1-210ENST00000493588 ADAMTS8Q9UP79 889 aa19.47■□□□□ 0.71
NUB1-210ENST00000493588 STARD3NLO95772 234 aa19.46■□□□□ 0.71
NUB1-210ENST00000493588 DDR1Q08345 913 aa19.46■□□□□ 0.71
NUB1-210ENST00000493588 GPR162Q16538 588 aa19.46■□□□□ 0.71
NUB1-210ENST00000493588 PNNQ9H307 717 aaKnown RBP19.46■□□□□ 0.71
NUB1-210ENST00000493588 C4AP0C0L4 1744 aa19.45■□□□□ 0.7
NUB1-210ENST00000493588 NEFMP07197 916 aa19.45■□□□□ 0.7
NUB1-210ENST00000493588 TM4SF1P30408 202 aa19.45■□□□□ 0.7
NUB1-210ENST00000493588 TEX13AQ9BXU3 409 aaPredicted RBP19.45■□□□□ 0.7
NUB1-210ENST00000493588 MAPK8IP3Q9UPT6 1336 aa19.45■□□□□ 0.7
NUB1-210ENST00000493588 TMPOP42166 694 aaKnown RBP19.44■□□□□ 0.7
NUB1-210ENST00000493588 PIP4K2AP48426 406 aaPredicted RBP19.44■□□□□ 0.7
NUB1-210ENST00000493588 RIPK4P57078 832 aa19.44■□□□□ 0.7
NUB1-210ENST00000493588 CCDC184Q52MB2 194 aa19.44■□□□□ 0.7
NUB1-210ENST00000493588 PELP1Q8IZL8 1130 aaKnown RBP19.44■□□□□ 0.7
NUB1-210ENST00000493588 NARFQ9UHQ1 456 aa19.44■□□□□ 0.7
NUB1-210ENST00000493588 RRP7AQ9Y3A4 280 aaKnown RBP19.44■□□□□ 0.7
NUB1-210ENST00000493588 COL15A1P39059 1388 aa19.44■□□□□ 0.7
NUB1-210ENST00000493588 YY1P25490 414 aa19.43■□□□□ 0.7
NUB1-210ENST00000493588 WWC3Q9ULE0 1092 aa19.43■□□□□ 0.7
NUB1-210ENST00000493588 ZPR1O75312 459 aa19.42■□□□□ 0.7
NUB1-210ENST00000493588 DLG5Q8TDM6 1919 aa19.41■□□□□ 0.7
NUB1-210ENST00000493588 POLRMTO00411 1230 aaKnown RBP19.41■□□□□ 0.7
NUB1-210ENST00000493588 SNRPA1P09661 255 aaKnown RBP19.41■□□□□ 0.7
NUB1-210ENST00000493588 PARP3Q9Y6F1 533 aa19.41■□□□□ 0.7
NUB1-210ENST00000493588 IL6STP40189 918 aaPredicted RBP19.4■□□□□ 0.7
NUB1-210ENST00000493588 NFIXQ14938 502 aa19.4■□□□□ 0.7
NUB1-210ENST00000493588 TBC1D2BQ9UPU7 963 aa19.4■□□□□ 0.7
NUB1-210ENST00000493588 A0A0G2JLW4 131 aa19.39■□□□□ 0.69
NUB1-210ENST00000493588 NBPF26B4DH59 902 aa19.39■□□□□ 0.69
NUB1-210ENST00000493588 EIF4A1P60842 406 aaKnown RBP19.39■□□□□ 0.69
NUB1-210ENST00000493588 WDR43Q15061 677 aaKnown RBP eCLIP19.39■□□□□ 0.69
NUB1-210ENST00000493588 NEUROD2Q15784 382 aa19.39■□□□□ 0.69
NUB1-210ENST00000493588 NBPF10Q6P3W6 841 aaKnown RBP19.39■□□□□ 0.69
NUB1-210ENST00000493588 NBPF15Q8N660 670 aa19.39■□□□□ 0.69
NUB1-210ENST00000493588 RUNDC1Q96C34 613 aa19.39■□□□□ 0.69
NUB1-210ENST00000493588 TRIM35Q9UPQ4 493 aa19.39■□□□□ 0.69
NUB1-210ENST00000493588 C10orf71Q711Q0 1435 aa19.38■□□□□ 0.69
NUB1-210ENST00000493588 ZNF330Q9Y3S2 320 aaPredicted RBP19.38■□□□□ 0.69
NUB1-210ENST00000493588 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
NUB1-210ENST00000493588 GIGYF1O75420 1035 aaPredicted RBP19.37■□□□□ 0.69
NUB1-210ENST00000493588 KCNA3P22001 575 aa19.37■□□□□ 0.69
NUB1-210ENST00000493588 PNISRQ8TF01 805 aaKnown RBP19.37■□□□□ 0.69
NUB1-210ENST00000493588 DPEP1P16444 411 aa19.36■□□□□ 0.69
NUB1-210ENST00000493588 TGFB2P61812 414 aa19.36■□□□□ 0.69
NUB1-210ENST00000493588 A0A087WZG4 1122 aa19.35■□□□□ 0.69
NUB1-210ENST00000493588 CAMTA2O94983 1202 aa19.35■□□□□ 0.69
NUB1-210ENST00000493588 TBC1D9BQ66K14 1250 aa19.35■□□□□ 0.69
NUB1-210ENST00000493588 BICDL1Q6ZP65 573 aa19.35■□□□□ 0.69
NUB1-210ENST00000493588 RNF216Q9NWF9 866 aaPredicted RBP19.34■□□□□ 0.69
NUB1-210ENST00000493588 KIAA1551Q9HCM1 1747 aa19.34■□□□□ 0.69
NUB1-210ENST00000493588 GRIN3BO60391 1043 aa19.33■□□□□ 0.68
NUB1-210ENST00000493588 SERPINB2P05120 415 aa19.33■□□□□ 0.68
NUB1-210ENST00000493588 TSPYL4Q9UJ04 414 aa19.33■□□□□ 0.68
NUB1-210ENST00000493588 KIF13BQ9NQT8 1826 aa19.32■□□□□ 0.68
NUB1-210ENST00000493588 KDM3BQ7LBC6 1761 aa19.32■□□□□ 0.68
NUB1-210ENST00000493588 DZIP3Q86Y13 1208 aaKnown RBP19.32■□□□□ 0.68
NUB1-210ENST00000493588 APAF1O14727 1248 aa19.31■□□□□ 0.68
NUB1-210ENST00000493588 CHRNA5P30532 468 aa19.31■□□□□ 0.68
NUB1-210ENST00000493588 CHL1O00533 1208 aa19.3■□□□□ 0.68
NUB1-210ENST00000493588 LMOD3Q0VAK6 560 aa19.3■□□□□ 0.68
NUB1-210ENST00000493588 N4BP2Q86UW6 1770 aaPredicted RBP19.29■□□□□ 0.68
NUB1-210ENST00000493588 KRT24Q2M2I5 525 aa19.29■□□□□ 0.68
NUB1-210ENST00000493588 CCDC24Q8N4L8 307 aa19.29■□□□□ 0.68
NUB1-210ENST00000493588 ZNF784Q8NCA9 323 aaPredicted RBP19.29■□□□□ 0.68
NUB1-210ENST00000493588 BABAM1Q9NWV8 329 aa19.29■□□□□ 0.68
NUB1-210ENST00000493588 CARMIL3Q8ND23 1372 aa19.29■□□□□ 0.68
NUB1-210ENST00000493588 SENP3-EIF4A1A0A087X0R7 540 aa19.28■□□□□ 0.68
NUB1-210ENST00000493588 HLFQ16534 295 aa19.28■□□□□ 0.68
NUB1-210ENST00000493588 NGEFQ8N5V2 710 aa19.28■□□□□ 0.68
NUB1-210ENST00000493588 BCS1LQ9Y276 419 aa19.28■□□□□ 0.68
NUB1-210ENST00000493588 LAS1LQ9Y4W2 734 aaKnown RBP19.27■□□□□ 0.68
NUB1-210ENST00000493588 ANP32CO43423 234 aa19.26■□□□□ 0.67
NUB1-210ENST00000493588 PDIA6Q15084 440 aa19.26■□□□□ 0.67
NUB1-210ENST00000493588 PRR5LQ6MZQ0 368 aa19.26■□□□□ 0.67
NUB1-210ENST00000493588 TTLL7Q6ZT98 887 aa19.26■□□□□ 0.67
NUB1-210ENST00000493588 LRP10Q7Z4F1 713 aa19.26■□□□□ 0.67
NUB1-210ENST00000493588 NPM2Q86SE8 214 aaKnown RBP19.26■□□□□ 0.67
NUB1-210ENST00000493588 NRXN2Q9P2S2 1712 aa19.25■□□□□ 0.67
NUB1-210ENST00000493588 AFDNP55196 1824 aaKnown RBP19.25■□□□□ 0.67
NUB1-210ENST00000493588 MYL6BP14649 208 aa19.25■□□□□ 0.67
NUB1-210ENST00000493588 EIF2S2P20042 333 aaKnown RBP19.25■□□□□ 0.67
NUB1-210ENST00000493588 PROSER3Q2NL68 480 aa19.25■□□□□ 0.67
NUB1-210ENST00000493588 CLEC4GQ6UXB4 293 aa19.25■□□□□ 0.67
NUB1-210ENST00000493588 SETDB2Q96T68 719 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms