RNA–Protein interactions for RNA: ENST00000493521.5

SOX2-OT-215, SOX2 overlapping transcript, humanhuman

TSL 3 BASIC

Gene SOX2-OT, Length 1,239 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-215ENST00000493521 U2SURPO15042 1029 aaKnown RBP13.74□□□□□ -0.21
SOX2-OT-215ENST00000493521 CCDC87Q9NVE4 849 aa13.74□□□□□ -0.21
SOX2-OT-215ENST00000493521 CARMIL3Q8ND23 1372 aa13.73□□□□□ -0.21
SOX2-OT-215ENST00000493521 KIF3CO14782 793 aa13.73□□□□□ -0.21
SOX2-OT-215ENST00000493521 TM4SF1P30408 202 aa13.73□□□□□ -0.21
SOX2-OT-215ENST00000493521 GPBP1L1Q9HC44 474 aaPredicted RBP13.73□□□□□ -0.21
SOX2-OT-215ENST00000493521 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
SOX2-OT-215ENST00000493521 PRAMEF22A3QJZ6 481 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 ANP32CO43423 234 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 FCHSD2O94868 740 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 PRELPP51888 382 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 TGFB2P61812 414 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 NFIXQ14938 502 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 ARHGAP27Q6ZUM4 889 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 CCDC24Q8N4L8 307 aa13.72□□□□□ -0.21
SOX2-OT-215ENST00000493521 COL15A1P39059 1388 aa13.71□□□□□ -0.21
SOX2-OT-215ENST00000493521 CANXP27824 592 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-215ENST00000493521 PIP4K2AP48426 406 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-215ENST00000493521 ZNF496Q96IT1 587 aaPredicted RBP13.71□□□□□ -0.21
SOX2-OT-215ENST00000493521 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
SOX2-OT-215ENST00000493521 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.22
SOX2-OT-215ENST00000493521 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.22
SOX2-OT-215ENST00000493521 NRXN2Q9P2S2 1712 aa13.7□□□□□ -0.22
SOX2-OT-215ENST00000493521 HMGB2P26583 209 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-215ENST00000493521 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
SOX2-OT-215ENST00000493521 BICDL1Q6ZP65 573 aa13.69□□□□□ -0.22
SOX2-OT-215ENST00000493521 NMRK2Q9NPI5 230 aa13.69□□□□□ -0.22
SOX2-OT-215ENST00000493521 ANKRD31Q8N7Z5 1873 aa13.68□□□□□ -0.22
SOX2-OT-215ENST00000493521 RASSF7Q02833 373 aa13.68□□□□□ -0.22
SOX2-OT-215ENST00000493521 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
SOX2-OT-215ENST00000493521 NARFQ9UHQ1 456 aa13.68□□□□□ -0.22
SOX2-OT-215ENST00000493521 A1BGP04217 495 aa13.67□□□□□ -0.22
SOX2-OT-215ENST00000493521 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
SOX2-OT-215ENST00000493521 C9orf131Q5VYM1 1079 aa13.67□□□□□ -0.22
SOX2-OT-215ENST00000493521 TBC1D9BQ66K14 1250 aa13.67□□□□□ -0.22
SOX2-OT-215ENST00000493521 SBF1O95248 1867 aa13.67□□□□□ -0.22
SOX2-OT-215ENST00000493521 HEG1Q9ULI3 1381 aa13.67□□□□□ -0.22
SOX2-OT-215ENST00000493521 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 ZPR1O75312 459 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 SERPINB2P05120 415 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 EIF5P55010 431 aaKnown RBP13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 ZNF790Q6PG37 636 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 MCM10Q7L590 875 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 TBC1D2BQ9UPU7 963 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 COL11A2P13942 1736 aaPredicted RBP13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 CEMIPQ8WUJ3 1361 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 SCN7AQ01118 1682 aa13.66□□□□□ -0.22
SOX2-OT-215ENST00000493521 PIM2Q9P1W9 311 aa13.65□□□□□ -0.22
SOX2-OT-215ENST00000493521 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
SOX2-OT-215ENST00000493521 USP16Q9Y5T5 823 aa13.65□□□□□ -0.22
SOX2-OT-215ENST00000493521 DLEC1Q9Y238 1755 aa13.65□□□□□ -0.22
SOX2-OT-215ENST00000493521 HTRA3P83110 453 aa13.64□□□□□ -0.23
SOX2-OT-215ENST00000493521 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
SOX2-OT-215ENST00000493521 VSIG10Q8N0Z9 540 aa13.64□□□□□ -0.23
SOX2-OT-215ENST00000493521 TEFQ10587 303 aa13.63□□□□□ -0.23
SOX2-OT-215ENST00000493521 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
SOX2-OT-215ENST00000493521 GAS2L2Q8NHY3 880 aa13.63□□□□□ -0.23
SOX2-OT-215ENST00000493521 MIS18AQ9NYP9 233 aa13.63□□□□□ -0.23
SOX2-OT-215ENST00000493521 CCER2I3L3R5 266 aa13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 U2AF1L5P0DN76 240 aaPredicted RBP13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 HSPA6P17066 643 aa13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 U2AF1Q01081 240 aaKnown RBP eCLIP13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 PIAS4Q8N2W9 510 aaPredicted RBP13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 PRKRIP1Q9H875 184 aaPredicted RBP13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 RNF181Q9P0P0 153 aa13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 BCORQ6W2J9 1755 aa13.62□□□□□ -0.23
SOX2-OT-215ENST00000493521 CCDC88AQ3V6T2 1871 aa13.61□□□□□ -0.23
SOX2-OT-215ENST00000493521 BTBD11A6QL63 1104 aa13.61□□□□□ -0.23
SOX2-OT-215ENST00000493521 CAMTA2O94983 1202 aa13.61□□□□□ -0.23
SOX2-OT-215ENST00000493521 ZNF219Q9P2Y4 722 aaPredicted RBP13.61□□□□□ -0.23
SOX2-OT-215ENST00000493521 DLG5Q8TDM6 1919 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 NBPF26B4DH59 902 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 NFKBIEO00221 500 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 CACNA1SQ13698 1873 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 PRR5LQ6MZQ0 368 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 NBPF10Q6P3W6 841 aaKnown RBP13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 SLC51AQ86UW1 340 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 C2CD5Q86YS7 1000 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 NBPF15Q8N660 670 aa13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
SOX2-OT-215ENST00000493521 FMNL2Q96PY5 1086 aa13.59□□□□□ -0.23
SOX2-OT-215ENST00000493521 RRAGCQ9HB90 399 aa13.59□□□□□ -0.23
SOX2-OT-215ENST00000493521 SLX4Q8IY92 1834 aa13.58□□□□□ -0.24
SOX2-OT-215ENST00000493521 STARD3NLO95772 234 aa13.58□□□□□ -0.24
SOX2-OT-215ENST00000493521 TIAM2Q8IVF5 1701 aa13.58□□□□□ -0.24
SOX2-OT-215ENST00000493521 IL6STP40189 918 aaPredicted RBP13.57□□□□□ -0.24
SOX2-OT-215ENST00000493521 HLFQ16534 295 aa13.56□□□□□ -0.24
SOX2-OT-215ENST00000493521 OLFM4Q6UX06 510 aa13.56□□□□□ -0.24
SOX2-OT-215ENST00000493521 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-215ENST00000493521 DNAJC5GQ8N7S2 189 aa13.56□□□□□ -0.24
SOX2-OT-215ENST00000493521 CFAP53Q96M91 514 aa13.56□□□□□ -0.24
SOX2-OT-215ENST00000493521 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
SOX2-OT-215ENST00000493521 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
SOX2-OT-215ENST00000493521 C21orf2O43822 256 aa13.55□□□□□ -0.24
SOX2-OT-215ENST00000493521 TOMM70O94826 608 aa13.55□□□□□ -0.24
SOX2-OT-215ENST00000493521 TTLL6Q8N841 843 aa13.55□□□□□ -0.24
SOX2-OT-215ENST00000493521 ZNF622Q969S3 477 aaKnown RBP eCLIP13.55□□□□□ -0.24
SOX2-OT-215ENST00000493521 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
SOX2-OT-215ENST00000493521 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
SOX2-OT-215ENST00000493521 TNRC6CQ9HCJ0 1690 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms