RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 AMER1Q5JTC6 1135 aaPredicted RBP18.68■□□□□ 0.58
SAMM50-204ENST00000493161 MRC1P22897 1456 aa18.67■□□□□ 0.58
SAMM50-204ENST00000493161 WDR90Q96KV7 1748 aa18.67■□□□□ 0.58
SAMM50-204ENST00000493161 RASSF7Q02833 373 aa18.67■□□□□ 0.58
SAMM50-204ENST00000493161 BCL2L12Q9HB09 334 aa18.67■□□□□ 0.58
SAMM50-204ENST00000493161 ZBTB1Q9Y2K1 713 aa18.67■□□□□ 0.58
SAMM50-204ENST00000493161 PRELPP51888 382 aa18.66■□□□□ 0.58
SAMM50-204ENST00000493161 MTHFSDQ2M296 383 aaKnown RBP18.66■□□□□ 0.58
SAMM50-204ENST00000493161 C16orf71Q8IYS4 520 aaPredicted RBP18.66■□□□□ 0.58
SAMM50-204ENST00000493161 SBF1O95248 1867 aa18.66■□□□□ 0.58
SAMM50-204ENST00000493161 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
SAMM50-204ENST00000493161 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
SAMM50-204ENST00000493161 KDM2BQ8NHM5 1336 aa18.65■□□□□ 0.58
SAMM50-204ENST00000493161 COL15A1P39059 1388 aa18.65■□□□□ 0.58
SAMM50-204ENST00000493161 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
SAMM50-204ENST00000493161 VIRMAQ69YN4 1812 aaKnown RBP18.63■□□□□ 0.57
SAMM50-204ENST00000493161 FSTL1Q12841 308 aa18.63■□□□□ 0.57
SAMM50-204ENST00000493161 SERPINB2P05120 415 aa18.62■□□□□ 0.57
SAMM50-204ENST00000493161 CANXP27824 592 aaKnown RBP18.62■□□□□ 0.57
SAMM50-204ENST00000493161 KLRG1Q96E93 195 aa18.62■□□□□ 0.57
SAMM50-204ENST00000493161 CARMIL3Q8ND23 1372 aa18.62■□□□□ 0.57
SAMM50-204ENST00000493161 TNRC6CQ9HCJ0 1690 aaKnown RBP18.61■□□□□ 0.57
SAMM50-204ENST00000493161 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
SAMM50-204ENST00000493161 BICDL1Q6ZP65 573 aa18.6■□□□□ 0.57
SAMM50-204ENST00000493161 CC2D1BQ5T0F9 858 aaKnown RBP18.59■□□□□ 0.57
SAMM50-204ENST00000493161 C2CD5Q86YS7 1000 aa18.59■□□□□ 0.57
SAMM50-204ENST00000493161 VSIG10Q8N0Z9 540 aa18.59■□□□□ 0.57
SAMM50-204ENST00000493161 UBR2Q8IWV8 1755 aa18.59■□□□□ 0.57
SAMM50-204ENST00000493161 DLEC1Q9Y238 1755 aa18.59■□□□□ 0.57
SAMM50-204ENST00000493161 PER1O15534 1290 aaPredicted RBP18.58■□□□□ 0.56
SAMM50-204ENST00000493161 DIAPH1O60610 1272 aaKnown RBP18.58■□□□□ 0.56
SAMM50-204ENST00000493161 LMNB1P20700 586 aa18.58■□□□□ 0.56
SAMM50-204ENST00000493161 TTLL6Q8N841 843 aa18.58■□□□□ 0.56
SAMM50-204ENST00000493161 JMYQ8N9B5 988 aa18.58■□□□□ 0.56
SAMM50-204ENST00000493161 NFKBIEO00221 500 aa18.57■□□□□ 0.56
SAMM50-204ENST00000493161 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
SAMM50-204ENST00000493161 COL13A1Q5TAT6 717 aaPredicted RBP18.57■□□□□ 0.56
SAMM50-204ENST00000493161 CCDC24Q8N4L8 307 aa18.57■□□□□ 0.56
SAMM50-204ENST00000493161 GLTPD2A6NH11 291 aa18.56■□□□□ 0.56
SAMM50-204ENST00000493161 TBC1D9BQ66K14 1250 aa18.56■□□□□ 0.56
SAMM50-204ENST00000493161 SMC1BQ8NDV3 1235 aa18.56■□□□□ 0.56
SAMM50-204ENST00000493161 ZNF496Q96IT1 587 aaPredicted RBP18.56■□□□□ 0.56
SAMM50-204ENST00000493161 H0YIN7 160 aa18.55■□□□□ 0.56
SAMM50-204ENST00000493161 CNGB1Q14028 1251 aaPredicted RBP18.55■□□□□ 0.56
SAMM50-204ENST00000493161 IL17REQ8NFR9 667 aa18.55■□□□□ 0.56
SAMM50-204ENST00000493161 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
SAMM50-204ENST00000493161 ZC3H4Q9UPT8 1303 aaKnown RBP18.54■□□□□ 0.56
SAMM50-204ENST00000493161 TTC5Q8N0Z6 440 aa18.54■□□□□ 0.56
SAMM50-204ENST00000493161 ZNF219Q9P2Y4 722 aaPredicted RBP18.54■□□□□ 0.56
SAMM50-204ENST00000493161 TBC1D2BQ9UPU7 963 aa18.54■□□□□ 0.56
SAMM50-204ENST00000493161 TIAM2Q8IVF5 1701 aa18.54■□□□□ 0.56
SAMM50-204ENST00000493161 ANKRD31Q8N7Z5 1873 aa18.54■□□□□ 0.56
SAMM50-204ENST00000493161 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
SAMM50-204ENST00000493161 POTECB2RU33 542 aa18.53■□□□□ 0.56
SAMM50-204ENST00000493161 STARD3NLO95772 234 aa18.53■□□□□ 0.56
SAMM50-204ENST00000493161 VEGFAP15692 232 aaPredicted RBP18.53■□□□□ 0.56
SAMM50-204ENST00000493161 CCDC88AQ3V6T2 1871 aa18.53■□□□□ 0.56
SAMM50-204ENST00000493161 ZNF330Q9Y3S2 320 aaPredicted RBP18.53■□□□□ 0.56
SAMM50-204ENST00000493161 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
SAMM50-204ENST00000493161 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.56
SAMM50-204ENST00000493161 HEG1Q9ULI3 1381 aa18.52■□□□□ 0.55
SAMM50-204ENST00000493161 A0A087WZG4 1122 aa18.51■□□□□ 0.55
SAMM50-204ENST00000493161 U2SURPO15042 1029 aaKnown RBP18.51■□□□□ 0.55
SAMM50-204ENST00000493161 KCNQ3O43525 872 aa18.51■□□□□ 0.55
SAMM50-204ENST00000493161 C21orf2O43822 256 aa18.51■□□□□ 0.55
SAMM50-204ENST00000493161 A1BGP04217 495 aa18.51■□□□□ 0.55
SAMM50-204ENST00000493161 PRR5LQ6MZQ0 368 aa18.51■□□□□ 0.55
SAMM50-204ENST00000493161 PCNTO95613 3336 aa18.51■□□□□ 0.55
SAMM50-204ENST00000493161 COL11A2P13942 1736 aaPredicted RBP18.51■□□□□ 0.55
SAMM50-204ENST00000493161 SCN7AQ01118 1682 aa18.5■□□□□ 0.55
SAMM50-204ENST00000493161 GNAT3A8MTJ3 354 aa18.5■□□□□ 0.55
SAMM50-204ENST00000493161 TEFQ10587 303 aa18.5■□□□□ 0.55
SAMM50-204ENST00000493161 SIPA1L3O60292 1781 aaPredicted RBP18.5■□□□□ 0.55
SAMM50-204ENST00000493161 BRIP1Q9BX63 1249 aa18.49■□□□□ 0.55
SAMM50-204ENST00000493161 PHACTR3Q96KR7 559 aa18.48■□□□□ 0.55
SAMM50-204ENST00000493161 CAMTA2O94983 1202 aa18.47■□□□□ 0.55
SAMM50-204ENST00000493161 PDE6BP35913 854 aa18.47■□□□□ 0.55
SAMM50-204ENST00000493161 IL6STP40189 918 aaPredicted RBP18.47■□□□□ 0.55
SAMM50-204ENST00000493161 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
SAMM50-204ENST00000493161 CAPN15O75808 1086 aa18.46■□□□□ 0.55
SAMM50-204ENST00000493161 ERFEQ4G0M1 354 aa18.46■□□□□ 0.55
SAMM50-204ENST00000493161 GAS2L2Q8NHY3 880 aa18.46■□□□□ 0.55
SAMM50-204ENST00000493161 TEX13AQ9BXU3 409 aaPredicted RBP18.46■□□□□ 0.55
SAMM50-204ENST00000493161 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.54
SAMM50-204ENST00000493161 CEMIPQ8WUJ3 1361 aa18.45■□□□□ 0.54
SAMM50-204ENST00000493161 PRAMEF22A3QJZ6 481 aa18.45■□□□□ 0.54
SAMM50-204ENST00000493161 FMNL2Q96PY5 1086 aa18.45■□□□□ 0.54
SAMM50-204ENST00000493161 POTEIP0CG38 1075 aa18.44■□□□□ 0.54
SAMM50-204ENST00000493161 POTEJP0CG39 1038 aa18.44■□□□□ 0.54
SAMM50-204ENST00000493161 DPY19L2Q6NUT2 758 aa18.44■□□□□ 0.54
SAMM50-204ENST00000493161 CNBD1Q8NA66 436 aa18.44■□□□□ 0.54
SAMM50-204ENST00000493161 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
SAMM50-204ENST00000493161 USP16Q9Y5T5 823 aa18.44■□□□□ 0.54
SAMM50-204ENST00000493161 SLX4Q8IY92 1834 aa18.44■□□□□ 0.54
SAMM50-204ENST00000493161 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
SAMM50-204ENST00000493161 DDNO94850 711 aaPredicted RBP18.43■□□□□ 0.54
SAMM50-204ENST00000493161 HSPA1AP0DMV8 641 aaKnown RBP18.43■□□□□ 0.54
SAMM50-204ENST00000493161 HSPA1BP0DMV9 641 aaKnown RBP18.43■□□□□ 0.54
SAMM50-204ENST00000493161 SRGNP10124 158 aa18.43■□□□□ 0.54
SAMM50-204ENST00000493161 PRKAR2BP31323 418 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms