RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 CEP350Q5VT06 3117 aa19.96■□□□□ 0.79
CDC42SE1-205ENST00000491825 POLRMTO00411 1230 aaKnown RBP19.95■□□□□ 0.78
CDC42SE1-205ENST00000491825 DIEXFQ68CQ4 756 aaKnown RBP19.95■□□□□ 0.78
CDC42SE1-205ENST00000491825 COL15A1P39059 1388 aa19.95■□□□□ 0.78
CDC42SE1-205ENST00000491825 BRCA1P38398 1863 aaKnown RBP19.94■□□□□ 0.78
CDC42SE1-205ENST00000491825 U2AF1L5P0DN76 240 aaPredicted RBP19.94■□□□□ 0.78
CDC42SE1-205ENST00000491825 U2AF1Q01081 240 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDC42SE1-205ENST00000491825 USPL1Q5W0Q7 1092 aa19.94■□□□□ 0.78
CDC42SE1-205ENST00000491825 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
CDC42SE1-205ENST00000491825 RSPH6AQ9H0K4 717 aa19.94■□□□□ 0.78
CDC42SE1-205ENST00000491825 FCHSD2O94868 740 aa19.93■□□□□ 0.78
CDC42SE1-205ENST00000491825 GAS2L2Q8NHY3 880 aa19.93■□□□□ 0.78
CDC42SE1-205ENST00000491825 ZNF526Q8TF50 670 aaPredicted RBP19.93■□□□□ 0.78
CDC42SE1-205ENST00000491825 BCL2L12Q9HB09 334 aa19.93■□□□□ 0.78
CDC42SE1-205ENST00000491825 CEMIPQ8WUJ3 1361 aa19.93■□□□□ 0.78
CDC42SE1-205ENST00000491825 VIRMAQ69YN4 1812 aaKnown RBP19.92■□□□□ 0.78
CDC42SE1-205ENST00000491825 GNAT3A8MTJ3 354 aa19.92■□□□□ 0.78
CDC42SE1-205ENST00000491825 NARFQ9UHQ1 456 aa19.92■□□□□ 0.78
CDC42SE1-205ENST00000491825 ZPR1O75312 459 aa19.91■□□□□ 0.78
CDC42SE1-205ENST00000491825 NFIXQ14938 502 aa19.9■□□□□ 0.78
CDC42SE1-205ENST00000491825 ZNF790Q6PG37 636 aa19.9■□□□□ 0.78
CDC42SE1-205ENST00000491825 ZNF496Q96IT1 587 aaPredicted RBP19.9■□□□□ 0.78
CDC42SE1-205ENST00000491825 PHACTR3Q96KR7 559 aa19.9■□□□□ 0.78
CDC42SE1-205ENST00000491825 KIF3CO14782 793 aa19.89■□□□□ 0.77
CDC42SE1-205ENST00000491825 SIPA1L3O60292 1781 aaPredicted RBP19.89■□□□□ 0.77
CDC42SE1-205ENST00000491825 PRKAR2BP31323 418 aa19.89■□□□□ 0.77
CDC42SE1-205ENST00000491825 TTC5Q8N0Z6 440 aa19.89■□□□□ 0.77
CDC42SE1-205ENST00000491825 PIM2Q9P1W9 311 aa19.89■□□□□ 0.77
CDC42SE1-205ENST00000491825 HEG1Q9ULI3 1381 aa19.89■□□□□ 0.77
CDC42SE1-205ENST00000491825 NRXN2Q9P2S2 1712 aa19.88■□□□□ 0.77
CDC42SE1-205ENST00000491825 CHRNA5P30532 468 aa19.88■□□□□ 0.77
CDC42SE1-205ENST00000491825 EIF5P55010 431 aaKnown RBP19.88■□□□□ 0.77
CDC42SE1-205ENST00000491825 TEFQ10587 303 aa19.88■□□□□ 0.77
CDC42SE1-205ENST00000491825 WDR43Q15061 677 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDC42SE1-205ENST00000491825 CCDC184Q52MB2 194 aa19.88■□□□□ 0.77
CDC42SE1-205ENST00000491825 ARHGAP27Q6ZUM4 889 aa19.88■□□□□ 0.77
CDC42SE1-205ENST00000491825 DALRD3Q5D0E6 543 aaKnown RBP19.87■□□□□ 0.77
CDC42SE1-205ENST00000491825 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
CDC42SE1-205ENST00000491825 MRS2Q9HD23 443 aa19.87■□□□□ 0.77
CDC42SE1-205ENST00000491825 ARFGEF1Q9Y6D6 1849 aa19.86■□□□□ 0.77
CDC42SE1-205ENST00000491825 STARD3NLO95772 234 aa19.86■□□□□ 0.77
CDC42SE1-205ENST00000491825 CANXP27824 592 aaKnown RBP19.86■□□□□ 0.77
CDC42SE1-205ENST00000491825 PLEKHF1Q96S99 279 aa19.86■□□□□ 0.77
CDC42SE1-205ENST00000491825 CARMIL3Q8ND23 1372 aa19.84■□□□□ 0.77
CDC42SE1-205ENST00000491825 CCER2I3L3R5 266 aa19.84■□□□□ 0.77
CDC42SE1-205ENST00000491825 SERPINB2P05120 415 aa19.83■□□□□ 0.77
CDC42SE1-205ENST00000491825 PNISRQ8TF01 805 aaKnown RBP19.83■□□□□ 0.77
CDC42SE1-205ENST00000491825 TEX13AQ9BXU3 409 aaPredicted RBP19.83■□□□□ 0.77
CDC42SE1-205ENST00000491825 SCN7AQ01118 1682 aa19.83■□□□□ 0.76
CDC42SE1-205ENST00000491825 KCNQ3O43525 872 aa19.82■□□□□ 0.76
CDC42SE1-205ENST00000491825 HSPA6P17066 643 aa19.82■□□□□ 0.76
CDC42SE1-205ENST00000491825 C9orf131Q5VYM1 1079 aa19.82■□□□□ 0.76
CDC42SE1-205ENST00000491825 FMNL2Q96PY5 1086 aa19.82■□□□□ 0.76
CDC42SE1-205ENST00000491825 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
CDC42SE1-205ENST00000491825 AFDNP55196 1824 aaKnown RBP19.81■□□□□ 0.76
CDC42SE1-205ENST00000491825 A0A087WZG4 1122 aa19.81■□□□□ 0.76
CDC42SE1-205ENST00000491825 NEFMP07197 916 aa19.81■□□□□ 0.76
CDC42SE1-205ENST00000491825 IL6STP40189 918 aaPredicted RBP19.81■□□□□ 0.76
CDC42SE1-205ENST00000491825 DLG5Q8TDM6 1919 aa19.8■□□□□ 0.76
CDC42SE1-205ENST00000491825 MAPK8IP3Q9UPT6 1336 aa19.8■□□□□ 0.76
CDC42SE1-205ENST00000491825 BTBD11A6QL63 1104 aa19.8■□□□□ 0.76
CDC42SE1-205ENST00000491825 TBC1D9BQ66K14 1250 aa19.79■□□□□ 0.76
CDC42SE1-205ENST00000491825 NMRK2Q9NPI5 230 aa19.79■□□□□ 0.76
CDC42SE1-205ENST00000491825 DLEC1Q9Y238 1755 aa19.78■□□□□ 0.76
CDC42SE1-205ENST00000491825 A1BGP04217 495 aa19.78■□□□□ 0.76
CDC42SE1-205ENST00000491825 BICDL1Q6ZP65 573 aa19.78■□□□□ 0.76
CDC42SE1-205ENST00000491825 RUNDC1Q96C34 613 aa19.78■□□□□ 0.76
CDC42SE1-205ENST00000491825 TBC1D2BQ9UPU7 963 aa19.78■□□□□ 0.76
CDC42SE1-205ENST00000491825 CAMTA2O94983 1202 aa19.77■□□□□ 0.76
CDC42SE1-205ENST00000491825 MCM10Q7L590 875 aa19.77■□□□□ 0.76
CDC42SE1-205ENST00000491825 RNF181Q9P0P0 153 aa19.77■□□□□ 0.76
CDC42SE1-205ENST00000491825 PRAMEF22A3QJZ6 481 aa19.76■□□□□ 0.75
CDC42SE1-205ENST00000491825 TOMM70O94826 608 aa19.76■□□□□ 0.75
CDC42SE1-205ENST00000491825 NFE2L2Q16236 605 aa19.76■□□□□ 0.75
CDC42SE1-205ENST00000491825 ZNF330Q9Y3S2 320 aaPredicted RBP19.76■□□□□ 0.75
CDC42SE1-205ENST00000491825 USP16Q9Y5T5 823 aa19.76■□□□□ 0.75
CDC42SE1-205ENST00000491825 HTATSF1O43719 755 aaKnown RBP19.75■□□□□ 0.75
CDC42SE1-205ENST00000491825 PRELPP51888 382 aa19.75■□□□□ 0.75
CDC42SE1-205ENST00000491825 RASSF7Q02833 373 aa19.75■□□□□ 0.75
CDC42SE1-205ENST00000491825 PRR5LQ6MZQ0 368 aa19.75■□□□□ 0.75
CDC42SE1-205ENST00000491825 C2CD5Q86YS7 1000 aa19.75■□□□□ 0.75
CDC42SE1-205ENST00000491825 MIER1Q8N108 512 aa19.75■□□□□ 0.75
CDC42SE1-205ENST00000491825 DCTN1Q14203 1278 aa19.74■□□□□ 0.75
CDC42SE1-205ENST00000491825 TTLL6Q8N841 843 aa19.74■□□□□ 0.75
CDC42SE1-205ENST00000491825 RTF1Q92541 710 aaKnown RBP19.74■□□□□ 0.75
CDC42SE1-205ENST00000491825 CCDC146Q8IYE0 955 aa19.73■□□□□ 0.75
CDC42SE1-205ENST00000491825 BCORQ6W2J9 1755 aa19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 H0YIN7 160 aa19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 SNRPA1P09661 255 aaKnown RBP19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 DZIP3Q86Y13 1208 aaKnown RBP19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 ANKRD31Q8N7Z5 1873 aa19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 BRIP1Q9BX63 1249 aa19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 ZC3H4Q9UPT8 1303 aaKnown RBP19.72■□□□□ 0.75
CDC42SE1-205ENST00000491825 COL11A2P13942 1736 aaPredicted RBP19.71■□□□□ 0.75
CDC42SE1-205ENST00000491825 NFKBIEO00221 500 aa19.71■□□□□ 0.75
CDC42SE1-205ENST00000491825 NBPF26B4DH59 902 aa19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 LMNB1P20700 586 aa19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 TMPOP42166 694 aaKnown RBP19.7■□□□□ 0.74
CDC42SE1-205ENST00000491825 NBPF10Q6P3W6 841 aaKnown RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms