RNA–Protein interactions for RNA: ENST00000491502.1

NUP188-208, Transcript of nucleoporin 188, humanhuman

TSL 3

Gene NUP188, Length 534 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-208ENST00000491502 GTF3C3Q9Y5Q9 886 aa17.45■□□□□ 0.38
NUP188-208ENST00000491502 CEMIPQ8WUJ3 1361 aa17.44■□□□□ 0.38
NUP188-208ENST00000491502 DUSP27Q5VZP5 1158 aa17.44■□□□□ 0.38
NUP188-208ENST00000491502 RCAN3Q9UKA8 241 aa17.44■□□□□ 0.38
NUP188-208ENST00000491502 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
NUP188-208ENST00000491502 CRKLP46109 303 aaKnown RBP17.43■□□□□ 0.38
NUP188-208ENST00000491502 AMIGO3Q86WK7 504 aa17.43■□□□□ 0.38
NUP188-208ENST00000491502 SUPT16HQ9Y5B9 1047 aaKnown RBP17.43■□□□□ 0.38
NUP188-208ENST00000491502 CT47B1P0C2W7 299 aaPredicted RBP17.42■□□□□ 0.38
NUP188-208ENST00000491502 GNAI1P63096 354 aa17.42■□□□□ 0.38
NUP188-208ENST00000491502 MSL1Q68DK7 614 aa17.42■□□□□ 0.38
NUP188-208ENST00000491502 ZNF790Q6PG37 636 aa17.42■□□□□ 0.38
NUP188-208ENST00000491502 TEX13AQ9BXU3 409 aaPredicted RBP17.42■□□□□ 0.38
NUP188-208ENST00000491502 COL5A3P25940 1745 aaPredicted RBP17.41■□□□□ 0.38
NUP188-208ENST00000491502 BTBD11A6QL63 1104 aa17.41■□□□□ 0.38
NUP188-208ENST00000491502 RFC4P35249 363 aa17.41■□□□□ 0.38
NUP188-208ENST00000491502 SMIM5Q71RC9 77 aa17.41■□□□□ 0.38
NUP188-208ENST00000491502 DNAJC10Q8IXB1 793 aa17.41■□□□□ 0.38
NUP188-208ENST00000491502 CICQ96RK0 1608 aaPredicted RBP17.4■□□□□ 0.38
NUP188-208ENST00000491502 ERICH6BQ5W0A0 696 aa17.4■□□□□ 0.38
NUP188-208ENST00000491502 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.4■□□□□ 0.38
NUP188-208ENST00000491502 ARHGEF1Q92888 912 aaKnown RBP17.4■□□□□ 0.38
NUP188-208ENST00000491502 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
NUP188-208ENST00000491502 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
NUP188-208ENST00000491502 STARD3NLO95772 234 aa17.39■□□□□ 0.37
NUP188-208ENST00000491502 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
NUP188-208ENST00000491502 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
NUP188-208ENST00000491502 MCM10Q7L590 875 aa17.39■□□□□ 0.37
NUP188-208ENST00000491502 NLGN1Q8N2Q7 840 aa17.39■□□□□ 0.37
NUP188-208ENST00000491502 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
NUP188-208ENST00000491502 KCPQ6ZWJ8 1503 aa17.38■□□□□ 0.37
NUP188-208ENST00000491502 KLHL34Q8N239 644 aa17.38■□□□□ 0.37
NUP188-208ENST00000491502 ZNF496Q96IT1 587 aaPredicted RBP17.38■□□□□ 0.37
NUP188-208ENST00000491502 MYH14Q7Z406 1995 aaKnown RBP17.38■□□□□ 0.37
NUP188-208ENST00000491502 TJP1Q07157 1748 aa17.38■□□□□ 0.37
NUP188-208ENST00000491502 SIPA1L3O60292 1781 aaPredicted RBP17.38■□□□□ 0.37
NUP188-208ENST00000491502 TAF7Q15545 349 aaPredicted RBP17.37■□□□□ 0.37
NUP188-208ENST00000491502 HEG1Q9ULI3 1381 aa17.37■□□□□ 0.37
NUP188-208ENST00000491502 UBR2Q8IWV8 1755 aa17.36■□□□□ 0.37
NUP188-208ENST00000491502 DCTN1Q14203 1278 aa17.36■□□□□ 0.37
NUP188-208ENST00000491502 CFAP44Q96MT7 982 aa17.36■□□□□ 0.37
NUP188-208ENST00000491502 CD2APQ9Y5K6 639 aa17.36■□□□□ 0.37
NUP188-208ENST00000491502 ZNF428Q96B54 188 aa17.35■□□□□ 0.37
NUP188-208ENST00000491502 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
NUP188-208ENST00000491502 GYS1P13807 737 aa17.34■□□□□ 0.37
NUP188-208ENST00000491502 RNF123Q5XPI4 1314 aa17.34■□□□□ 0.37
NUP188-208ENST00000491502 BABAM1Q9NWV8 329 aa17.34■□□□□ 0.37
NUP188-208ENST00000491502 SOS1Q07889 1333 aaPredicted RBP17.33■□□□□ 0.36
NUP188-208ENST00000491502 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.36
NUP188-208ENST00000491502 A0A087WZG4 1122 aa17.33■□□□□ 0.36
NUP188-208ENST00000491502 KCNQ3O43525 872 aa17.33■□□□□ 0.36
NUP188-208ENST00000491502 ZPR1O75312 459 aa17.33■□□□□ 0.36
NUP188-208ENST00000491502 MMP10P09238 476 aa17.33■□□□□ 0.36
NUP188-208ENST00000491502 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
NUP188-208ENST00000491502 USP42Q9H9J4 1324 aaKnown RBP17.32■□□□□ 0.36
NUP188-208ENST00000491502 DLG5Q8TDM6 1919 aa17.32■□□□□ 0.36
NUP188-208ENST00000491502 SNRPA1P09661 255 aaKnown RBP17.32■□□□□ 0.36
NUP188-208ENST00000491502 CANXP27824 592 aaKnown RBP17.32■□□□□ 0.36
NUP188-208ENST00000491502 FKBP8Q14318 412 aa17.32■□□□□ 0.36
NUP188-208ENST00000491502 ZBTB1Q9Y2K1 713 aa17.32■□□□□ 0.36
NUP188-208ENST00000491502 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
NUP188-208ENST00000491502 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
NUP188-208ENST00000491502 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
NUP188-208ENST00000491502 NARFQ9UHQ1 456 aa17.31■□□□□ 0.36
NUP188-208ENST00000491502 PARP3Q9Y6F1 533 aa17.31■□□□□ 0.36
NUP188-208ENST00000491502 EIF5P55010 431 aaKnown RBP17.3■□□□□ 0.36
NUP188-208ENST00000491502 GPR162Q16538 588 aa17.3■□□□□ 0.36
NUP188-208ENST00000491502 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
NUP188-208ENST00000491502 COL15A1P39059 1388 aa17.29■□□□□ 0.36
NUP188-208ENST00000491502 IL6STP40189 918 aaPredicted RBP17.29■□□□□ 0.36
NUP188-208ENST00000491502 NLGN2Q8NFZ4 835 aa17.29■□□□□ 0.36
NUP188-208ENST00000491502 TSR2Q969E8 191 aaKnown RBP17.29■□□□□ 0.36
NUP188-208ENST00000491502 CHMP4AQ9BY43 222 aa17.29■□□□□ 0.36
NUP188-208ENST00000491502 CHL1O00533 1208 aa17.28■□□□□ 0.36
NUP188-208ENST00000491502 EXOSC9Q06265 439 aaKnown RBP17.28■□□□□ 0.36
NUP188-208ENST00000491502 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
NUP188-208ENST00000491502 THUMPD2Q9BTF0 503 aaKnown RBP17.28■□□□□ 0.36
NUP188-208ENST00000491502 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
NUP188-208ENST00000491502 USP16Q9Y5T5 823 aa17.28■□□□□ 0.36
NUP188-208ENST00000491502 C4AP0C0L4 1744 aa17.27■□□□□ 0.36
NUP188-208ENST00000491502 A1BGP04217 495 aa17.27■□□□□ 0.36
NUP188-208ENST00000491502 MS4A1P11836 297 aa17.27■□□□□ 0.36
NUP188-208ENST00000491502 MBIPQ9NS73 344 aa17.27■□□□□ 0.36
NUP188-208ENST00000491502 TM4SF1P30408 202 aa17.26■□□□□ 0.35
NUP188-208ENST00000491502 ALDH1L2Q3SY69 923 aa17.26■□□□□ 0.35
NUP188-208ENST00000491502 TSPYL4Q9UJ04 414 aa17.26■□□□□ 0.35
NUP188-208ENST00000491502 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
NUP188-208ENST00000491502 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
NUP188-208ENST00000491502 TGFB2P61812 414 aa17.25■□□□□ 0.35
NUP188-208ENST00000491502 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
NUP188-208ENST00000491502 EIF4A1P60842 406 aaKnown RBP17.24■□□□□ 0.35
NUP188-208ENST00000491502 PRAMEF22A3QJZ6 481 aa17.23■□□□□ 0.35
NUP188-208ENST00000491502 GIGYF1O75420 1035 aaPredicted RBP17.23■□□□□ 0.35
NUP188-208ENST00000491502 YY1P25490 414 aa17.23■□□□□ 0.35
NUP188-208ENST00000491502 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
NUP188-208ENST00000491502 POLRMTO00411 1230 aaKnown RBP17.22■□□□□ 0.35
NUP188-208ENST00000491502 IPO8O15397 1037 aaKnown RBP17.22■□□□□ 0.35
NUP188-208ENST00000491502 TWISTNBQ3B726 338 aaPredicted RBP17.22■□□□□ 0.35
NUP188-208ENST00000491502 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
NUP188-208ENST00000491502 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms