RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 PALD1Q9ULE6 856 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 TRIM35Q9UPQ4 493 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 ZDHHC9Q9Y397 364 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 ATP10AO60312 1499 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 DCTPP1Q9H773 170 aa13.59□□□□□ -0.23
PCSK9-202ENST00000490692 MCM10Q7L590 875 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 KIAA1524Q8TCG1 905 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 GPATCH3Q96I76 525 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 VAMP4O75379 141 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 F13A1P00488 732 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
PCSK9-202ENST00000490692 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
PCSK9-202ENST00000490692 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.24
PCSK9-202ENST00000490692 SNW1Q13573 536 aaKnown RBP13.57□□□□□ -0.24
PCSK9-202ENST00000490692 HSP90B2PQ58FF3 399 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
PCSK9-202ENST00000490692 RTEL1-TNFRSF6BF6WH68 1400 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 NOS1P29475 1434 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 FCHSD2O94868 740 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 IFIT2P09913 472 aaKnown RBP13.57□□□□□ -0.24
PCSK9-202ENST00000490692 DDIT3P35638 169 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 ME1P48163 572 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 ARHGAP29Q52LW3 1261 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 LMOD2Q6P5Q4 547 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 NEK11Q8NG66 645 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 CABP1Q9NZU7 370 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 PDCP20941 246 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 IBSPP21815 317 aaPredicted RBP13.57□□□□□ -0.24
PCSK9-202ENST00000490692 RRS1Q15050 365 aaKnown RBP13.57□□□□□ -0.24
PCSK9-202ENST00000490692 UNC13BO14795 1591 aa13.57□□□□□ -0.24
PCSK9-202ENST00000490692 ZMYM3Q14202 1370 aa13.56□□□□□ -0.24
PCSK9-202ENST00000490692 PLXNC1O60486 1568 aa13.56□□□□□ -0.24
PCSK9-202ENST00000490692 SLU7O95391 586 aaKnown RBP13.56□□□□□ -0.24
PCSK9-202ENST00000490692 CCDC191Q8NCU4 936 aa13.56□□□□□ -0.24
PCSK9-202ENST00000490692 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
PCSK9-202ENST00000490692 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
PCSK9-202ENST00000490692 IQGAP3Q86VI3 1631 aa13.56□□□□□ -0.24
PCSK9-202ENST00000490692 GTF2A1P52655 376 aaPredicted RBP13.56□□□□□ -0.24
PCSK9-202ENST00000490692 ANKRD44Q8N8A2 993 aa13.56□□□□□ -0.24
PCSK9-202ENST00000490692 TSPYL1Q9H0U9 437 aa13.56□□□□□ -0.24
PCSK9-202ENST00000490692 ZFYVE16Q7Z3T8 1539 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 SFPQP23246 707 aaKnown RBP eCLIP13.55□□□□□ -0.24
PCSK9-202ENST00000490692 COG3Q96JB2 828 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 USP16Q9Y5T5 823 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 SULT6B1Q6IMI4 303 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 SYT10Q6XYQ8 523 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 BIN1O00499 593 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 AK2P54819 239 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 IRX5P78411 483 aaPredicted RBP13.55□□□□□ -0.24
PCSK9-202ENST00000490692 KRBA2Q6ZNG9 492 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 PHACTR3Q96KR7 559 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 RSPH14Q9UHP6 348 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 DNAI1Q9UI46 699 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 LRRFIP2Q9Y608 721 aaKnown RBP13.55□□□□□ -0.24
PCSK9-202ENST00000490692 TRPM1Q7Z4N2 1603 aa13.55□□□□□ -0.24
PCSK9-202ENST00000490692 AK9Q5TCS8 1911 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 NAT10Q9H0A0 1025 aaKnown RBP13.54□□□□□ -0.24
PCSK9-202ENST00000490692 CCDC69A6NI79 296 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 ST7Q9NRC1 585 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 EMILIN1Q9Y6C2 1016 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 CEP85Q6P2H3 762 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 TMC6Q7Z403 805 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 CCDC102AQ96A19 550 aa13.54□□□□□ -0.24
PCSK9-202ENST00000490692 PPIP5K1Q6PFW1 1433 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 ERCC6LQ2NKX8 1250 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 STK11IPQ8N1F8 1099 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 DEF6Q9H4E7 631 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 RAB11FIP3O75154 756 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 SERPINC1P01008 464 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 GNAI3P08754 354 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 IDI1Q13907 227 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 CEP57L1Q8IYX8 460 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 RGS22Q8NE09 1264 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
PCSK9-202ENST00000490692 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
PCSK9-202ENST00000490692 CEBPAP49715 358 aaPredicted RBP13.52□□□□□ -0.24
PCSK9-202ENST00000490692 PRAM1Q96QH2 718 aa13.52□□□□□ -0.24
PCSK9-202ENST00000490692 CLGNO14967 610 aa13.52□□□□□ -0.25
PCSK9-202ENST00000490692 RNF20Q5VTR2 975 aa13.52□□□□□ -0.25
PCSK9-202ENST00000490692 INTS4Q96HW7 963 aaKnown RBP13.52□□□□□ -0.25
PCSK9-202ENST00000490692 SIL1Q9H173 461 aa13.52□□□□□ -0.25
PCSK9-202ENST00000490692 RASSF4Q9H2L5 321 aa13.52□□□□□ -0.25
PCSK9-202ENST00000490692 ZNF518AQ6AHZ1 1483 aa13.52□□□□□ -0.25
PCSK9-202ENST00000490692 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.25
PCSK9-202ENST00000490692 TERF2Q15554 542 aa13.51□□□□□ -0.25
PCSK9-202ENST00000490692 SRGAP3O43295 1099 aa13.51□□□□□ -0.25
PCSK9-202ENST00000490692 MCM6Q14566 821 aa13.51□□□□□ -0.25
PCSK9-202ENST00000490692 BLOC1S2Q6QNY1 142 aa13.51□□□□□ -0.25
PCSK9-202ENST00000490692 FSD1Q9BTV5 496 aa13.51□□□□□ -0.25
PCSK9-202ENST00000490692 SCAND2PQ9GZW5 306 aaPredicted RBP13.51□□□□□ -0.25
PCSK9-202ENST00000490692 CCDC171Q6TFL3 1326 aa13.51□□□□□ -0.25
PCSK9-202ENST00000490692 POLR1AO95602 1720 aaPredicted RBP13.5□□□□□ -0.25
PCSK9-202ENST00000490692 E9PCH4 1651 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms