RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 SPATA31D1Q6ZQQ2 1576 aa9.07□□□□□ -0.96
PDCD4-209ENST00000489049 RPGRIP1LQ68CZ1 1315 aa9.06□□□□□ -0.96
PDCD4-209ENST00000489049 MAP3K4Q9Y6R4 1608 aa9.06□□□□□ -0.96
PDCD4-209ENST00000489049 FSHRP23945 695 aa9.06□□□□□ -0.96
PDCD4-209ENST00000489049 CDCA8Q53HL2 280 aa9.06□□□□□ -0.96
PDCD4-209ENST00000489049 HIRIP3Q9BW71 556 aaPredicted RBP9.06□□□□□ -0.96
PDCD4-209ENST00000489049 E9PCH4 1651 aa9.05□□□□□ -0.96
PDCD4-209ENST00000489049 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
PDCD4-209ENST00000489049 ZNF326Q5BKZ1 582 aaKnown RBP9.05□□□□□ -0.96
PDCD4-209ENST00000489049 C6orf118Q5T5N4 469 aa9.05□□□□□ -0.96
PDCD4-209ENST00000489049 MEIOBQ8N635 442 aa9.05□□□□□ -0.96
PDCD4-209ENST00000489049 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.96
PDCD4-209ENST00000489049 GPBP1L1Q9HC44 474 aaPredicted RBP9.05□□□□□ -0.96
PDCD4-209ENST00000489049 SPHKAPQ2M3C7 1700 aa9.05□□□□□ -0.96
PDCD4-209ENST00000489049 TRPM1Q7Z4N2 1603 aa9.05□□□□□ -0.96
PDCD4-209ENST00000489049 EFCAB6Q5THR3 1501 aa9.05□□□□□ -0.96
PDCD4-209ENST00000489049 ARHGAP31Q2M1Z3 1444 aa9.05□□□□□ -0.96
PDCD4-209ENST00000489049 MAGEB6P1A0A0J9YX57 407 aa9.04□□□□□ -0.96
PDCD4-209ENST00000489049 CYB5RLQ6IPT4 315 aa9.04□□□□□ -0.96
PDCD4-209ENST00000489049 VASH1Q7L8A9 365 aaPredicted RBP9.04□□□□□ -0.96
PDCD4-209ENST00000489049 LINC00528Q8N1L1 170 aa9.04□□□□□ -0.96
PDCD4-209ENST00000489049 PRKRIP1Q9H875 184 aaPredicted RBP9.04□□□□□ -0.96
PDCD4-209ENST00000489049 EIF3AQ14152 1382 aaKnown RBP9.03□□□□□ -0.96
PDCD4-209ENST00000489049 MROH1Q8NDA8 1641 aa9.03□□□□□ -0.96
PDCD4-209ENST00000489049 ZSCAN1Q8NBB4 408 aa9.03□□□□□ -0.96
PDCD4-209ENST00000489049 CARD14Q9BXL6 1004 aa9.03□□□□□ -0.96
PDCD4-209ENST00000489049 ZMYM4Q5VZL5 1548 aa9.03□□□□□ -0.96
PDCD4-209ENST00000489049 CEP152O94986 1710 aa9.02□□□□□ -0.96
PDCD4-209ENST00000489049 KIAA1210Q9ULL0 1709 aa9.02□□□□□ -0.96
PDCD4-209ENST00000489049 MYOM2P54296 1465 aa9.02□□□□□ -0.96
PDCD4-209ENST00000489049 ST20-MTHFSA0A0A6YYL1 179 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 FAM181BA6NEQ2 426 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 MAN1A2O60476 641 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 UPP2O95045 317 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 VSIG8P0DPA2 414 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 BMP2P12643 396 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 CTDSPL2Q05D32 466 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 RALBP1Q15311 655 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 RGL3Q3MIN7 710 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 GTF3C3Q9Y5Q9 886 aa9.02□□□□□ -0.97
PDCD4-209ENST00000489049 TMF1P82094 1093 aa9.01□□□□□ -0.97
PDCD4-209ENST00000489049 ERFEQ4G0M1 354 aa9.01□□□□□ -0.97
PDCD4-209ENST00000489049 CCDC116Q8IYX3 515 aa9.01□□□□□ -0.97
PDCD4-209ENST00000489049 REREQ9P2R6 1566 aa9.01□□□□□ -0.97
PDCD4-209ENST00000489049 EMILIN1Q9Y6C2 1016 aa9.01□□□□□ -0.97
PDCD4-209ENST00000489049 KDM4CQ9H3R0 1056 aa9□□□□□ -0.97
PDCD4-209ENST00000489049 SLC52A1Q9NWF4 448 aa9□□□□□ -0.97
PDCD4-209ENST00000489049 ZC3H13Q5T200 1668 aaKnown RBP9□□□□□ -0.97
PDCD4-209ENST00000489049 SOS2Q07890 1332 aaPredicted RBP9□□□□□ -0.97
PDCD4-209ENST00000489049 FAM69CQ0P6D2 419 aa8.99□□□□□ -0.97
PDCD4-209ENST00000489049 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
PDCD4-209ENST00000489049 LRRN4Q8WUT4 740 aa8.99□□□□□ -0.97
PDCD4-209ENST00000489049 SCAF11Q99590 1463 aaKnown RBP8.99□□□□□ -0.97
PDCD4-209ENST00000489049 RICTORQ6R327 1708 aa8.99□□□□□ -0.97
PDCD4-209ENST00000489049 ABCC3O15438 1527 aa8.99□□□□□ -0.97
PDCD4-209ENST00000489049 AGLP35573 1532 aa8.99□□□□□ -0.97
PDCD4-209ENST00000489049 FRMPD1Q5SYB0 1578 aa8.99□□□□□ -0.97
PDCD4-209ENST00000489049 DIP2BQ9P265 1576 aa8.99□□□□□ -0.97
PDCD4-209ENST00000489049 CLTCL1P53675 1640 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 NOS1P29475 1434 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 NRXN1Q9ULB1 1477 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 SH3D19Q5HYK7 790 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 FBXO31Q5XUX0 539 aaPredicted RBP8.98□□□□□ -0.97
PDCD4-209ENST00000489049 PDXDC2PQ6P474 469 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 TSEN34Q9BSV6 310 aaKnown RBP8.98□□□□□ -0.97
PDCD4-209ENST00000489049 FKBPLQ9UIM3 349 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 DNMT3LQ9UJW3 386 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 DIP2CQ9Y2E4 1556 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 KIF1BO60333 1816 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 INSRP06213 1382 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 ABCA6Q8N139 1617 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 MADDQ8WXG6 1647 aa8.98□□□□□ -0.97
PDCD4-209ENST00000489049 PPRC1Q5VV67 1664 aaKnown RBP8.97□□□□□ -0.97
PDCD4-209ENST00000489049 COL17A1Q9UMD9 1497 aaPredicted RBP8.97□□□□□ -0.97
PDCD4-209ENST00000489049 RAPGEF3O95398 923 aa8.97□□□□□ -0.97
PDCD4-209ENST00000489049 TESK2Q96S53 571 aa8.97□□□□□ -0.97
PDCD4-209ENST00000489049 ARHGAP9Q9BRR9 750 aa8.97□□□□□ -0.97
PDCD4-209ENST00000489049 SBNO2Q9Y2G9 1366 aa8.97□□□□□ -0.97
PDCD4-209ENST00000489049 ZFYVE9O95405 1425 aa8.97□□□□□ -0.97
PDCD4-209ENST00000489049 NPATQ14207 1427 aa8.97□□□□□ -0.97
PDCD4-209ENST00000489049 PPFIA3O75145 1194 aa8.96□□□□□ -0.98
PDCD4-209ENST00000489049 NBPF1Q3BBV0 1214 aa8.96□□□□□ -0.98
PDCD4-209ENST00000489049 PPP1R26Q5T8A7 1209 aaPredicted RBP8.96□□□□□ -0.98
PDCD4-209ENST00000489049 PPP2R2DQ66LE6 453 aa8.96□□□□□ -0.98
PDCD4-209ENST00000489049 GGT6Q6P531 493 aa8.96□□□□□ -0.98
PDCD4-209ENST00000489049 PUS7Q96PZ0 661 aaKnown RBP8.96□□□□□ -0.98
PDCD4-209ENST00000489049 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.96□□□□□ -0.98
PDCD4-209ENST00000489049 FAM117AQ9C073 453 aa8.96□□□□□ -0.98
PDCD4-209ENST00000489049 ZC3H4Q9UPT8 1303 aaKnown RBP8.96□□□□□ -0.98
PDCD4-209ENST00000489049 BRD4O60885 1362 aaPredicted RBP8.96□□□□□ -0.98
PDCD4-209ENST00000489049 ADGRB3O60242 1522 aa8.95□□□□□ -0.98
PDCD4-209ENST00000489049 SETBP1Q9Y6X0 1596 aa8.95□□□□□ -0.98
PDCD4-209ENST00000489049 NR6A1Q15406 480 aa8.95□□□□□ -0.98
PDCD4-209ENST00000489049 PROCA1Q8NCQ7 364 aaPredicted RBP8.95□□□□□ -0.98
PDCD4-209ENST00000489049 SLC10A4Q96EP9 437 aa8.95□□□□□ -0.98
PDCD4-209ENST00000489049 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
PDCD4-209ENST00000489049 MRS2Q9HD23 443 aa8.95□□□□□ -0.98
PDCD4-209ENST00000489049 PGPEP1Q9NXJ5 209 aa8.95□□□□□ -0.98
PDCD4-209ENST00000489049 NEUROD2Q15784 382 aa8.94□□□□□ -0.98
PDCD4-209ENST00000489049 Q6ZVU0 165 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms