RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 CHPF2Q9P2E5 772 aa8.8□□□□□ -1
PDAP1-203ENST00000488214 ANKRD36CQ5JPF3 1778 aa8.79□□□□□ -1
PDAP1-203ENST00000488214 GIGYF1O75420 1035 aaPredicted RBP8.79□□□□□ -1
PDAP1-203ENST00000488214 FLIIQ13045 1269 aa8.79□□□□□ -1
PDAP1-203ENST00000488214 G2E3Q7L622 706 aa8.79□□□□□ -1
PDAP1-203ENST00000488214 ARHGAP45Q92619 1136 aa8.79□□□□□ -1
PDAP1-203ENST00000488214 DDX19BQ9UMR2 479 aa8.79□□□□□ -1
PDAP1-203ENST00000488214 RREB1Q92766 1687 aa8.78□□□□□ -1
PDAP1-203ENST00000488214 ANXA1P04083 346 aa8.78□□□□□ -1
PDAP1-203ENST00000488214 FKBP5Q13451 457 aaPredicted RBP8.78□□□□□ -1
PDAP1-203ENST00000488214 MARCH10Q8NA82 808 aaPredicted RBP8.78□□□□□ -1
PDAP1-203ENST00000488214 ACSBG1Q96GR2 724 aa8.78□□□□□ -1
PDAP1-203ENST00000488214 CHMP4AQ9BY43 222 aa8.78□□□□□ -1
PDAP1-203ENST00000488214 TRPC5Q9UL62 973 aaPredicted RBP8.78□□□□□ -1
PDAP1-203ENST00000488214 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
PDAP1-203ENST00000488214 LY75O60449 1722 aa8.77□□□□□ -1
PDAP1-203ENST00000488214 PTCD1O75127 700 aaKnown RBP8.77□□□□□ -1.01
PDAP1-203ENST00000488214 SNRPA1P09661 255 aaKnown RBP8.77□□□□□ -1.01
PDAP1-203ENST00000488214 PROSER3Q2NL68 480 aa8.77□□□□□ -1.01
PDAP1-203ENST00000488214 PIGBQ92521 554 aa8.77□□□□□ -1.01
PDAP1-203ENST00000488214 GJD4Q96KN9 370 aaPredicted RBP8.77□□□□□ -1.01
PDAP1-203ENST00000488214 DBF4Q9UBU7 674 aaPredicted RBP8.77□□□□□ -1.01
PDAP1-203ENST00000488214 TAF1LQ8IZX4 1826 aa8.76□□□□□ -1.01
PDAP1-203ENST00000488214 F6X3S4 739 aa8.76□□□□□ -1.01
PDAP1-203ENST00000488214 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
PDAP1-203ENST00000488214 PELP1Q8IZL8 1130 aaKnown RBP8.76□□□□□ -1.01
PDAP1-203ENST00000488214 PHAXQ9H814 394 aaKnown RBP8.76□□□□□ -1.01
PDAP1-203ENST00000488214 BCORQ6W2J9 1755 aa8.76□□□□□ -1.01
PDAP1-203ENST00000488214 MYL6BP14649 208 aa8.75□□□□□ -1.01
PDAP1-203ENST00000488214 PIP4K2AP48426 406 aaPredicted RBP8.75□□□□□ -1.01
PDAP1-203ENST00000488214 PRIM1P49642 420 aaKnown RBP8.75□□□□□ -1.01
PDAP1-203ENST00000488214 RBM42Q9BTD8 480 aaKnown RBP8.75□□□□□ -1.01
PDAP1-203ENST00000488214 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
PDAP1-203ENST00000488214 ASAP1Q9ULH1 1129 aa8.75□□□□□ -1.01
PDAP1-203ENST00000488214 ADCY9O60503 1353 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 PALLDQ8WX93 1383 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 ATP10DQ9P241 1426 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 AAMPQ13685 434 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 SEPT12Q8IYM1 358 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 FBXO41Q8TF61 875 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 CHMP4BQ9H444 224 aaKnown RBP8.74□□□□□ -1.01
PDAP1-203ENST00000488214 C1orf115Q9H7X2 142 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 QTRT2Q9H974 415 aaKnown RBP8.74□□□□□ -1.01
PDAP1-203ENST00000488214 DDX21Q9NR30 783 aaKnown RBP eCLIP8.74□□□□□ -1.01
PDAP1-203ENST00000488214 HYPKQ9NX55 129 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 SCN7AQ01118 1682 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 ERBB4Q15303 1308 aa8.74□□□□□ -1.01
PDAP1-203ENST00000488214 MYH14Q7Z406 1995 aaKnown RBP8.73□□□□□ -1.01
PDAP1-203ENST00000488214 NUP98P52948 1817 aa8.73□□□□□ -1.01
PDAP1-203ENST00000488214 CCT4P50991 539 aaKnown RBP8.73□□□□□ -1.01
PDAP1-203ENST00000488214 AIMP1Q12904 312 aaKnown RBP8.73□□□□□ -1.01
PDAP1-203ENST00000488214 ZNF772Q68DY9 489 aaPredicted RBP8.73□□□□□ -1.01
PDAP1-203ENST00000488214 INTS3Q68E01 1043 aaKnown RBP8.73□□□□□ -1.01
PDAP1-203ENST00000488214 CENPQQ7L2Z9 268 aaPredicted RBP8.73□□□□□ -1.01
PDAP1-203ENST00000488214 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
PDAP1-203ENST00000488214 USP16Q9Y5T5 823 aa8.73□□□□□ -1.01
PDAP1-203ENST00000488214 TNS1Q9HBL0 1735 aaKnown RBP8.73□□□□□ -1.01
PDAP1-203ENST00000488214 KDM2BQ8NHM5 1336 aa8.73□□□□□ -1.01
PDAP1-203ENST00000488214 KCNQ2O43526 872 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 DDX58O95786 925 aaKnown RBP8.72□□□□□ -1.01
PDAP1-203ENST00000488214 PDIA6Q15084 440 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 FAM182BQ5T319 152 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 XAGE3Q8WTP9 111 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 DNAAF4Q8WXU2 420 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 MEIS3Q99687 375 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 ZBTB40Q9NUA8 1239 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 MAP3K2Q9Y2U5 619 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 ZNF330Q9Y3S2 320 aaPredicted RBP8.72□□□□□ -1.01
PDAP1-203ENST00000488214 PCDHB15Q9Y5E8 787 aa8.72□□□□□ -1.01
PDAP1-203ENST00000488214 C4AP0C0L4 1744 aa8.71□□□□□ -1.01
PDAP1-203ENST00000488214 C4BP0C0L5 1744 aa8.71□□□□□ -1.01
PDAP1-203ENST00000488214 PI4KAP2A4QPH2 592 aa8.71□□□□□ -1.02
PDAP1-203ENST00000488214 KSR2Q6VAB6 950 aa8.71□□□□□ -1.02
PDAP1-203ENST00000488214 VSIG10Q8N0Z9 540 aa8.71□□□□□ -1.02
PDAP1-203ENST00000488214 PI4KAP1Q8N8J0 262 aa8.71□□□□□ -1.02
PDAP1-203ENST00000488214 SRCIN1Q9C0H9 1055 aa8.71□□□□□ -1.02
PDAP1-203ENST00000488214 CASZ1Q86V15 1759 aa8.71□□□□□ -1.02
PDAP1-203ENST00000488214 MYH3P11055 1940 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 NBPF26B4DH59 902 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 ZBTB7BO15156 539 aaPredicted RBP8.7□□□□□ -1.02
PDAP1-203ENST00000488214 STARD3NLO95772 234 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 A1BGP04217 495 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 RBM6P78332 1123 aaKnown RBP8.7□□□□□ -1.02
PDAP1-203ENST00000488214 NBPF14Q5TI25 921 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 NBPF10Q6P3W6 841 aaKnown RBP8.7□□□□□ -1.02
PDAP1-203ENST00000488214 COPS6Q7L5N1 327 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 LRP10Q7Z4F1 713 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 RIC3Q7Z5B4 369 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 NBPF15Q8N660 670 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 SMARCC1Q92922 1105 aaPredicted RBP8.7□□□□□ -1.02
PDAP1-203ENST00000488214 SLC4A9Q96Q91 983 aa8.7□□□□□ -1.02
PDAP1-203ENST00000488214 TEX13AQ9BXU3 409 aaPredicted RBP8.7□□□□□ -1.02
PDAP1-203ENST00000488214 RGPD3A6NKT7 1758 aaPredicted RBP8.69□□□□□ -1.02
PDAP1-203ENST00000488214 LAMB2P55268 1798 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 RGPD4Q7Z3J3 1758 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 LOC102724428A0A0B4J2F2 783 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 ONECUT3O60422 494 aaPredicted RBP8.69□□□□□ -1.02
PDAP1-203ENST00000488214 IGHDP01880 384 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 ATP6V1AP38606 617 aa8.69□□□□□ -1.02
PDAP1-203ENST00000488214 SIK1P57059 783 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms