RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 ATRNO75882 1429 aa17.14■□□□□ 0.33
COPS7B-221ENST00000488111 GIGYF1O75420 1035 aaPredicted RBP17.14■□□□□ 0.33
COPS7B-221ENST00000488111 RLBP1P12271 317 aa17.14■□□□□ 0.33
COPS7B-221ENST00000488111 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
COPS7B-221ENST00000488111 FSD2A1L4K1 749 aa17.14■□□□□ 0.33
COPS7B-221ENST00000488111 TRIM27P14373 513 aa17.14■□□□□ 0.33
COPS7B-221ENST00000488111 FAM182BQ5T319 152 aa17.14■□□□□ 0.33
COPS7B-221ENST00000488111 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
COPS7B-221ENST00000488111 GLI3P10071 1580 aa17.13■□□□□ 0.33
COPS7B-221ENST00000488111 KIF16BQ96L93 1317 aa17.13■□□□□ 0.33
COPS7B-221ENST00000488111 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
COPS7B-221ENST00000488111 CCDC30Q5VVM6 783 aa17.13■□□□□ 0.33
COPS7B-221ENST00000488111 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
COPS7B-221ENST00000488111 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
COPS7B-221ENST00000488111 TOGARAM1Q9Y4F4 1720 aa17.12■□□□□ 0.33
COPS7B-221ENST00000488111 RRP9O43818 475 aaKnown RBP17.12■□□□□ 0.33
COPS7B-221ENST00000488111 XRCC6P12956 609 aaKnown RBP eCLIP17.12■□□□□ 0.33
COPS7B-221ENST00000488111 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
COPS7B-221ENST00000488111 G2E3Q7L622 706 aa17.12■□□□□ 0.33
COPS7B-221ENST00000488111 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
COPS7B-221ENST00000488111 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
COPS7B-221ENST00000488111 PDE3AQ14432 1141 aa17.11■□□□□ 0.33
COPS7B-221ENST00000488111 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
COPS7B-221ENST00000488111 IPO8O15397 1037 aaKnown RBP17.11■□□□□ 0.33
COPS7B-221ENST00000488111 ANXA1P04083 346 aa17.11■□□□□ 0.33
COPS7B-221ENST00000488111 FTSJ3Q8IY81 847 aaKnown RBP17.11■□□□□ 0.33
COPS7B-221ENST00000488111 SEPT12Q8IYM1 358 aa17.11■□□□□ 0.33
COPS7B-221ENST00000488111 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
COPS7B-221ENST00000488111 SEC24BO95487 1268 aa17.1■□□□□ 0.33
COPS7B-221ENST00000488111 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
COPS7B-221ENST00000488111 HOXB7P09629 217 aa17.1■□□□□ 0.33
COPS7B-221ENST00000488111 NAP1L5Q96NT1 182 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-221ENST00000488111 SLKQ9H2G2 1235 aaPredicted RBP17.1■□□□□ 0.33
COPS7B-221ENST00000488111 KAT6BQ8WYB5 2073 aa17.1■□□□□ 0.33
COPS7B-221ENST00000488111 SOS1Q07889 1333 aaPredicted RBP17.09■□□□□ 0.33
COPS7B-221ENST00000488111 GOLGA6L3A6NEY3 463 aa17.09■□□□□ 0.33
COPS7B-221ENST00000488111 KCNQ2O43526 872 aa17.09■□□□□ 0.33
COPS7B-221ENST00000488111 ZMYND15Q9H091 742 aa17.09■□□□□ 0.33
COPS7B-221ENST00000488111 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
COPS7B-221ENST00000488111 CHPF2Q9P2E5 772 aa17.09■□□□□ 0.33
COPS7B-221ENST00000488111 USP16Q9Y5T5 823 aa17.09■□□□□ 0.33
COPS7B-221ENST00000488111 ONECUT3O60422 494 aaPredicted RBP17.08■□□□□ 0.33
COPS7B-221ENST00000488111 IGHDP01880 384 aa17.08■□□□□ 0.33
COPS7B-221ENST00000488111 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.33
COPS7B-221ENST00000488111 HSP90AA2PQ14568 343 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-221ENST00000488111 ZNF772Q68DY9 489 aaPredicted RBP17.08■□□□□ 0.32
COPS7B-221ENST00000488111 VSIG10Q8N0Z9 540 aa17.08■□□□□ 0.32
COPS7B-221ENST00000488111 PHAXQ9H814 394 aaKnown RBP17.08■□□□□ 0.32
COPS7B-221ENST00000488111 BCL9O00512 1426 aa17.08■□□□□ 0.32
COPS7B-221ENST00000488111 HSP90AA1P07900 732 aaKnown RBP17.07■□□□□ 0.32
COPS7B-221ENST00000488111 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
COPS7B-221ENST00000488111 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
COPS7B-221ENST00000488111 PIP4K2AP48426 406 aaPredicted RBP17.07■□□□□ 0.32
COPS7B-221ENST00000488111 PROSER3Q2NL68 480 aa17.07■□□□□ 0.32
COPS7B-221ENST00000488111 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
COPS7B-221ENST00000488111 THSD7AQ9UPZ6 1657 aa17.06■□□□□ 0.32
COPS7B-221ENST00000488111 FLIIQ13045 1269 aa17.06■□□□□ 0.32
COPS7B-221ENST00000488111 PTF1AQ7RTS3 328 aa17.06■□□□□ 0.32
COPS7B-221ENST00000488111 ITPRIPQ8IWB1 547 aa17.06■□□□□ 0.32
COPS7B-221ENST00000488111 F6X3S4 739 aa17.05■□□□□ 0.32
COPS7B-221ENST00000488111 DOT1LQ8TEK3 1739 aa17.05■□□□□ 0.32
COPS7B-221ENST00000488111 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-221ENST00000488111 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
COPS7B-221ENST00000488111 DBF4Q9UBU7 674 aaPredicted RBP17.04■□□□□ 0.32
COPS7B-221ENST00000488111 ITGB4P16144 1822 aa17.04■□□□□ 0.32
COPS7B-221ENST00000488111 MYL6BP14649 208 aa17.04■□□□□ 0.32
COPS7B-221ENST00000488111 MVPQ14764 893 aaKnown RBP17.04■□□□□ 0.32
COPS7B-221ENST00000488111 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
COPS7B-221ENST00000488111 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
COPS7B-221ENST00000488111 PTPRCP08575 1304 aa17.03■□□□□ 0.32
COPS7B-221ENST00000488111 MCM4P33991 863 aa17.03■□□□□ 0.32
COPS7B-221ENST00000488111 RBM6P78332 1123 aaKnown RBP17.03■□□□□ 0.32
COPS7B-221ENST00000488111 PDIA6Q15084 440 aa17.03■□□□□ 0.32
COPS7B-221ENST00000488111 TBC1D2Q9BYX2 928 aa17.03■□□□□ 0.32
COPS7B-221ENST00000488111 PANK2Q9BZ23 570 aa17.03■□□□□ 0.32
COPS7B-221ENST00000488111 RGS17Q9UGC6 210 aaPredicted RBP17.03■□□□□ 0.32
COPS7B-221ENST00000488111 SLC4A10Q6U841 1118 aa17.02■□□□□ 0.32
COPS7B-221ENST00000488111 SLC4A9Q96Q91 983 aa17.02■□□□□ 0.32
COPS7B-221ENST00000488111 CHMP4AQ9BY43 222 aa17.02■□□□□ 0.32
COPS7B-221ENST00000488111 C5P01031 1676 aa17.02■□□□□ 0.32
COPS7B-221ENST00000488111 DNAJC10Q8IXB1 793 aa17.02■□□□□ 0.31
COPS7B-221ENST00000488111 RGS12O14924 1447 aa17.01■□□□□ 0.31
COPS7B-221ENST00000488111 AIMP1Q12904 312 aaKnown RBP17.01■□□□□ 0.31
COPS7B-221ENST00000488111 DDX21Q9NR30 783 aaKnown RBP eCLIP17.01■□□□□ 0.31
COPS7B-221ENST00000488111 ABCC4O15439 1325 aa17.01■□□□□ 0.31
COPS7B-221ENST00000488111 A1BGP04217 495 aa17.01■□□□□ 0.31
COPS7B-221ENST00000488111 PAPPAQ13219 1627 aa17■□□□□ 0.31
COPS7B-221ENST00000488111 MRE11P49959 708 aa17■□□□□ 0.31
COPS7B-221ENST00000488111 RXRBP28702 533 aa16.99■□□□□ 0.31
COPS7B-221ENST00000488111 KRT27Q7Z3Y8 459 aa16.99■□□□□ 0.31
COPS7B-221ENST00000488111 UPF2Q9HAU5 1272 aaKnown RBP16.99■□□□□ 0.31
COPS7B-221ENST00000488111 UBR2Q8IWV8 1755 aa16.99■□□□□ 0.31
COPS7B-221ENST00000488111 POTEAQ6S8J7 498 aa16.99■□□□□ 0.31
COPS7B-221ENST00000488111 HYPKQ9NX55 129 aa16.99■□□□□ 0.31
COPS7B-221ENST00000488111 DDX19BQ9UMR2 479 aa16.99■□□□□ 0.31
COPS7B-221ENST00000488111 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
COPS7B-221ENST00000488111 NBPF14Q5TI25 921 aa16.98■□□□□ 0.31
COPS7B-221ENST00000488111 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
COPS7B-221ENST00000488111 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
COPS7B-221ENST00000488111 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms