RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 PSMA6P60900 246 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 FOXK2Q01167 660 aa7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 SLC16A10Q8TF71 515 aa7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 KIFC2Q96AC6 838 aa7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 CXXC1Q9P0U4 656 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 DNMT3LQ9UJW3 386 aa7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 ZNF232Q9UNY5 417 aa7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 IQSEC3Q9UPP2 1182 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-217ENST00000488087 WEE1P30291 646 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 PLA2G4AP47712 749 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 POU4F2Q12837 409 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 OCLNQ16625 522 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 LCE2CQ5TA81 110 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 TAS1R3Q7RTX0 852 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 MKNK1Q9BUB5 465 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 SLAIN2Q9P270 581 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 PARP3Q9Y6F1 533 aa7.11□□□□□ -1.27
ECHDC1-217ENST00000488087 SERTM1A2A2V5 107 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 SOBPA7XYQ1 873 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 C21orf2O43822 256 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 SNRPBP14678 240 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 SSFA2P28290 1259 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 C4orf17Q53FE4 359 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 NBPF10Q6P3W6 841 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 L3MBTL2Q969R5 705 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 AIDAQ96BJ3 306 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 TRIM47Q96LD4 638 aa7.1□□□□□ -1.27
ECHDC1-217ENST00000488087 SPATA31C2B4DYI2 1134 aa7.09□□□□□ -1.27
ECHDC1-217ENST00000488087 FOXO3O43524 673 aa7.09□□□□□ -1.27
ECHDC1-217ENST00000488087 BRD1O95696 1058 aa7.09□□□□□ -1.27
ECHDC1-217ENST00000488087 NOS2P35228 1153 aa7.09□□□□□ -1.27
ECHDC1-217ENST00000488087 FKBP5Q13451 457 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-217ENST00000488087 AEBP1Q8IUX7 1158 aa7.09□□□□□ -1.27
ECHDC1-217ENST00000488087 ZSCAN1Q8NBB4 408 aa7.09□□□□□ -1.27
ECHDC1-217ENST00000488087 SUZ12Q15022 739 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 TEAD4Q15561 434 aa7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 NBPF1Q3BBV0 1214 aa7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 NGLY1Q96IV0 654 aa7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 C2orf49Q9BVC5 232 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 TIMMDC1Q9NPL8 285 aa7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
ECHDC1-217ENST00000488087 WDR44Q5JSH3 913 aa7.07□□□□□ -1.28
ECHDC1-217ENST00000488087 SH3PXD2AQ5TCZ1 1133 aa7.07□□□□□ -1.28
ECHDC1-217ENST00000488087 STAG2Q8N3U4 1231 aa7.07□□□□□ -1.28
ECHDC1-217ENST00000488087 KCTD17Q8N5Z5 321 aa7.07□□□□□ -1.28
ECHDC1-217ENST00000488087 ZDHHC1Q8WTX9 485 aa7.07□□□□□ -1.28
ECHDC1-217ENST00000488087 HCN4Q9Y3Q4 1203 aa7.07□□□□□ -1.28
ECHDC1-217ENST00000488087 EML1O00423 815 aa7.06□□□□□ -1.28
ECHDC1-217ENST00000488087 SCNN1AP37088 669 aa7.06□□□□□ -1.28
ECHDC1-217ENST00000488087 PHLDB3Q6NSJ2 640 aa7.06□□□□□ -1.28
ECHDC1-217ENST00000488087 ZNF295-AS1Q8N0V1 137 aa7.06□□□□□ -1.28
ECHDC1-217ENST00000488087 C1orf216Q8TAB5 229 aa7.06□□□□□ -1.28
ECHDC1-217ENST00000488087 A0A1B0GTH6 734 aa7.05□□□□□ -1.28
ECHDC1-217ENST00000488087 PTCD1O75127 700 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-217ENST00000488087 TATP17735 454 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-217ENST00000488087 PTSQ03393 145 aa7.05□□□□□ -1.28
ECHDC1-217ENST00000488087 GAS2L1Q99501 681 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-217ENST00000488087 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
ECHDC1-217ENST00000488087 ARID4AP29374 1257 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 TXLNAP40222 546 aa7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 KCNA1Q09470 495 aa7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 NAA30Q147X3 362 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 ARSJQ5FYB0 599 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 BICDL1Q6ZP65 573 aa7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 CAPN12Q6ZSI9 719 aa7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 ALDH16A1Q8IZ83 802 aa7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 GPAMQ9HCL2 828 aa7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 DYRK1BQ9Y463 629 aa7.04□□□□□ -1.28
ECHDC1-217ENST00000488087 PATL2C9JE40 543 aaKnown RBP7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 GMPRP36959 345 aa7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 HIRAP54198 1017 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 RIPOR1Q6ZS17 1223 aa7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 CCER1Q8TC90 406 aaPredicted RBP7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 RHPN1Q8TCX5 695 aa7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 IRF7Q92985 503 aa7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 COL26A1Q96A83 441 aa7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 ZDHHC3Q9NYG2 299 aa7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 SEPT3Q9UH03 358 aa7.03□□□□□ -1.28
ECHDC1-217ENST00000488087 ABL1P00519 1130 aa7.02□□□□□ -1.29
ECHDC1-217ENST00000488087 MSX1P28360 303 aa7.02□□□□□ -1.29
ECHDC1-217ENST00000488087 POTEAQ6S8J7 498 aa7.02□□□□□ -1.29
ECHDC1-217ENST00000488087 PGBD3Q8N328 593 aa7.02□□□□□ -1.29
ECHDC1-217ENST00000488087 NEUROD4Q9HD90 331 aa7.02□□□□□ -1.29
ECHDC1-217ENST00000488087 NXF1Q9UBU9 619 aaKnown RBP7.02□□□□□ -1.29
ECHDC1-217ENST00000488087 SENP3-EIF4A1A0A087X0R7 540 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 F11P03951 625 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 ATP4AP20648 1035 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 RTN1Q16799 776 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 C1orf53Q5VUE5 145 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 C16orf46Q6P387 395 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 GTF3C2Q8WUA4 911 aaPredicted RBP7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 RUBCNLQ9H714 662 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 GJA3Q9Y6H8 435 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 IVNS1ABPQ9Y6Y0 642 aa7.01□□□□□ -1.29
ECHDC1-217ENST00000488087 ZBTB7CA1YPR0 619 aa7□□□□□ -1.29
ECHDC1-217ENST00000488087 SLC35F4A4IF30 521 aa7□□□□□ -1.29
ECHDC1-217ENST00000488087 SERPINB4P48594 390 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms