RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 PCDHGC4Q9Y5F7 938 aa7.57□□□□□ -1.2
SPTA1-206ENST00000484520 DGKGP49619 791 aa7.56□□□□□ -1.2
SPTA1-206ENST00000484520 CD163Q86VB7 1156 aa7.56□□□□□ -1.2
SPTA1-206ENST00000484520 ATP4AP20648 1035 aa7.55□□□□□ -1.2
SPTA1-206ENST00000484520 SCNN1DP51172 638 aa7.55□□□□□ -1.2
SPTA1-206ENST00000484520 SIRT1Q96EB6 747 aa7.55□□□□□ -1.2
SPTA1-206ENST00000484520 ATXN7O15265 892 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-206ENST00000484520 INHAP05111 366 aa7.54□□□□□ -1.2
SPTA1-206ENST00000484520 CHRNA4P43681 627 aa7.54□□□□□ -1.2
SPTA1-206ENST00000484520 GDF10P55107 478 aa7.54□□□□□ -1.2
SPTA1-206ENST00000484520 BRPF1P55201 1214 aaPredicted RBP7.54□□□□□ -1.2
SPTA1-206ENST00000484520 CHSY3Q70JA7 882 aa7.54□□□□□ -1.2
SPTA1-206ENST00000484520 NLRP8Q86W28 1048 aa7.54□□□□□ -1.2
SPTA1-206ENST00000484520 C1orf216Q8TAB5 229 aa7.54□□□□□ -1.2
SPTA1-206ENST00000484520 NIFKQ9BYG3 293 aaKnown RBP7.54□□□□□ -1.2
SPTA1-206ENST00000484520 NOP53Q9NZM5 478 aaKnown RBP7.54□□□□□ -1.2
SPTA1-206ENST00000484520 HCN2Q9UL51 889 aa7.54□□□□□ -1.2
SPTA1-206ENST00000484520 DCDC2BA2VCK2 349 aa7.53□□□□□ -1.2
SPTA1-206ENST00000484520 MAPTP10636 758 aaKnown RBP7.53□□□□□ -1.2
SPTA1-206ENST00000484520 IRF5Q13568 498 aa7.53□□□□□ -1.2
SPTA1-206ENST00000484520 KLF15Q9UIH9 416 aa7.53□□□□□ -1.2
SPTA1-206ENST00000484520 CHIC2Q9UKJ5 165 aa7.53□□□□□ -1.2
SPTA1-206ENST00000484520 A0A1W2PNR3 127 aa7.52□□□□□ -1.21
SPTA1-206ENST00000484520 KHNYNO15037 678 aaKnown RBP7.52□□□□□ -1.21
SPTA1-206ENST00000484520 CD33P20138 364 aa7.52□□□□□ -1.21
SPTA1-206ENST00000484520 ADH6P28332 368 aa7.52□□□□□ -1.21
SPTA1-206ENST00000484520 SMTNP53814 917 aa7.52□□□□□ -1.21
SPTA1-206ENST00000484520 TNP2Q05952 138 aa7.52□□□□□ -1.21
SPTA1-206ENST00000484520 ARSJQ5FYB0 599 aaPredicted RBP7.52□□□□□ -1.21
SPTA1-206ENST00000484520 KRTAP4-8Q9BYQ9 185 aa7.52□□□□□ -1.21
SPTA1-206ENST00000484520 VAC14Q08AM6 782 aa7.51□□□□□ -1.21
SPTA1-206ENST00000484520 FCHSD1Q86WN1 690 aa7.51□□□□□ -1.21
SPTA1-206ENST00000484520 PRM3Q9NNZ6 103 aa7.51□□□□□ -1.21
SPTA1-206ENST00000484520 SERTAD1Q9UHV2 236 aa7.51□□□□□ -1.21
SPTA1-206ENST00000484520 DOC2BQ14184 412 aa7.5□□□□□ -1.21
SPTA1-206ENST00000484520 FAM182BQ5T319 152 aa7.5□□□□□ -1.21
SPTA1-206ENST00000484520 PCBP4P57723 403 aaKnown RBP7.49□□□□□ -1.21
SPTA1-206ENST00000484520 NBPF1Q3BBV0 1214 aa7.49□□□□□ -1.21
SPTA1-206ENST00000484520 TRIM11Q96F44 468 aa7.49□□□□□ -1.21
SPTA1-206ENST00000484520 AVENQ9NQS1 362 aaPredicted RBP7.49□□□□□ -1.21
SPTA1-206ENST00000484520 TMEM229AB2RXF0 380 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 TATP17735 454 aaPredicted RBP7.48□□□□□ -1.21
SPTA1-206ENST00000484520 ITGB7P26010 798 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 MAP7D1Q3KQU3 841 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 ZNF295-AS1Q8N0V1 137 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 PLPP7Q8NBV4 271 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 ZIC5Q96T25 663 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 SEMA6BQ9H3T3 888 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 PRR12Q9ULL5 1215 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 USP3Q9Y6I4 520 aa7.48□□□□□ -1.21
SPTA1-206ENST00000484520 CDK2AP1O14519 115 aa7.47□□□□□ -1.21
SPTA1-206ENST00000484520 PLVAPQ9BX97 442 aa7.47□□□□□ -1.21
SPTA1-206ENST00000484520 STRN4Q9NRL3 753 aa7.47□□□□□ -1.21
SPTA1-206ENST00000484520 ZDHHC3Q9NYG2 299 aa7.47□□□□□ -1.21
SPTA1-206ENST00000484520 CABP1Q9NZU7 370 aa7.47□□□□□ -1.21
SPTA1-206ENST00000484520 IQSEC3Q9UPP2 1182 aaPredicted RBP7.47□□□□□ -1.21
SPTA1-206ENST00000484520 GJA3Q9Y6H8 435 aa7.47□□□□□ -1.21
SPTA1-206ENST00000484520 BICRAQ9NZM4 1560 aa7.46□□□□□ -1.21
SPTA1-206ENST00000484520 A6NJY4 79 aa7.46□□□□□ -1.22
SPTA1-206ENST00000484520 FAM157BP0CG42 384 aa7.46□□□□□ -1.22
SPTA1-206ENST00000484520 GATA4P43694 442 aa7.46□□□□□ -1.22
SPTA1-206ENST00000484520 MTFR1Q15390 333 aa7.46□□□□□ -1.22
SPTA1-206ENST00000484520 ZNF468Q5VIY5 522 aaPredicted RBP7.46□□□□□ -1.22
SPTA1-206ENST00000484520 SLC4A9Q96Q91 983 aa7.46□□□□□ -1.22
SPTA1-206ENST00000484520 PARP3Q9Y6F1 533 aa7.46□□□□□ -1.22
SPTA1-206ENST00000484520 BAZ1AQ9NRL2 1556 aaPredicted RBP7.46□□□□□ -1.22
SPTA1-206ENST00000484520 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.45□□□□□ -1.22
SPTA1-206ENST00000484520 ABL2P42684 1182 aa7.45□□□□□ -1.22
SPTA1-206ENST00000484520 BICDL1Q6ZP65 573 aa7.45□□□□□ -1.22
SPTA1-206ENST00000484520 GDPD2Q9HCC8 539 aa7.45□□□□□ -1.22
SPTA1-206ENST00000484520 MARK1Q9P0L2 795 aa7.45□□□□□ -1.22
SPTA1-206ENST00000484520 UNC13AQ9UPW8 1703 aa7.44□□□□□ -1.22
SPTA1-206ENST00000484520 SPATA31C1P0DKV0 1188 aa7.43□□□□□ -1.22
SPTA1-206ENST00000484520 SEMA3FQ13275 785 aa7.43□□□□□ -1.22
SPTA1-206ENST00000484520 SAMD5Q5TGI4 173 aa7.43□□□□□ -1.22
SPTA1-206ENST00000484520 PCDHGA11Q9Y5H2 935 aa7.43□□□□□ -1.22
SPTA1-206ENST00000484520 ELOA3CA0A087WX78 387 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-206ENST00000484520 ELOA3DA6NLF2 546 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-206ENST00000484520 EFSO43281 561 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 TXLNAP40222 546 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 WASHC4Q2M389 1173 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 ELOA3BQ3SY89 546 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 ZMYM1Q5SVZ6 1142 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 SYT9Q86SS6 491 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 ELOA3Q8NG57 546 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 PSMG3-AS1Q96PY0 264 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 KRTAP9-2Q9BYQ4 174 aa7.42□□□□□ -1.22
SPTA1-206ENST00000484520 RSF1Q96T23 1441 aaPredicted RBP7.42□□□□□ -1.22
SPTA1-206ENST00000484520 PIK3CDO00329 1044 aa7.41□□□□□ -1.22
SPTA1-206ENST00000484520 ALAS2P22557 587 aa7.41□□□□□ -1.22
SPTA1-206ENST00000484520 LAMC2Q13753 1193 aa7.41□□□□□ -1.22
SPTA1-206ENST00000484520 SLC24A1O60721 1099 aa7.4□□□□□ -1.22
SPTA1-206ENST00000484520 ZDHHC1Q8WTX9 485 aa7.4□□□□□ -1.22
SPTA1-206ENST00000484520 KRTAP9-6A0A140TA67 174 aa7.39□□□□□ -1.23
SPTA1-206ENST00000484520 SPDYE3A6NKU9 549 aa7.39□□□□□ -1.23
SPTA1-206ENST00000484520 BACH1O14867 736 aa7.39□□□□□ -1.23
SPTA1-206ENST00000484520 RSPO4Q2I0M5 234 aaPredicted RBP7.39□□□□□ -1.23
SPTA1-206ENST00000484520 PRRT3Q5FWE3 981 aa7.39□□□□□ -1.23
SPTA1-206ENST00000484520 LRRC69Q6ZNQ3 347 aa7.39□□□□□ -1.23
SPTA1-206ENST00000484520 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms