RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 KIAA1551Q9HCM1 1747 aa16.27■□□□□ 0.19
MSH5-216ENST00000484309 COL15A1P39059 1388 aa16.26■□□□□ 0.19
MSH5-216ENST00000484309 ZNF316A6NFI3 1004 aaPredicted RBP16.26■□□□□ 0.19
MSH5-216ENST00000484309 CANXP27824 592 aaKnown RBP16.26■□□□□ 0.19
MSH5-216ENST00000484309 CCDC146Q8IYE0 955 aa16.26■□□□□ 0.19
MSH5-216ENST00000484309 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
MSH5-216ENST00000484309 USP42Q9H9J4 1324 aaKnown RBP16.25■□□□□ 0.19
MSH5-216ENST00000484309 SCN7AQ01118 1682 aa16.25■□□□□ 0.19
MSH5-216ENST00000484309 HTATSF1O43719 755 aaKnown RBP16.25■□□□□ 0.19
MSH5-216ENST00000484309 GPR162Q16538 588 aa16.25■□□□□ 0.19
MSH5-216ENST00000484309 PNNQ9H307 717 aaKnown RBP16.25■□□□□ 0.19
MSH5-216ENST00000484309 MIS18AQ9NYP9 233 aa16.25■□□□□ 0.19
MSH5-216ENST00000484309 WWC3Q9ULE0 1092 aa16.25■□□□□ 0.19
MSH5-216ENST00000484309 PRAMEF22A3QJZ6 481 aa16.24■□□□□ 0.19
MSH5-216ENST00000484309 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
MSH5-216ENST00000484309 NLGN1Q8N2Q7 840 aa16.24■□□□□ 0.19
MSH5-216ENST00000484309 ZNF330Q9Y3S2 320 aaPredicted RBP16.24■□□□□ 0.19
MSH5-216ENST00000484309 BCORQ6W2J9 1755 aa16.23■□□□□ 0.19
MSH5-216ENST00000484309 STARD3NLO95772 234 aa16.23■□□□□ 0.19
MSH5-216ENST00000484309 FKBP8Q14318 412 aa16.23■□□□□ 0.19
MSH5-216ENST00000484309 USPL1Q5W0Q7 1092 aa16.23■□□□□ 0.19
MSH5-216ENST00000484309 RRP7AQ9Y3A4 280 aaKnown RBP16.23■□□□□ 0.19
MSH5-216ENST00000484309 CD2APQ9Y5K6 639 aa16.23■□□□□ 0.19
MSH5-216ENST00000484309 ZPR1O75312 459 aa16.22■□□□□ 0.19
MSH5-216ENST00000484309 PIP4K2AP48426 406 aaPredicted RBP16.22■□□□□ 0.19
MSH5-216ENST00000484309 TAF7Q15545 349 aaPredicted RBP16.22■□□□□ 0.19
MSH5-216ENST00000484309 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
MSH5-216ENST00000484309 A1BGP04217 495 aa16.21■□□□□ 0.19
MSH5-216ENST00000484309 YY1P25490 414 aa16.21■□□□□ 0.19
MSH5-216ENST00000484309 RIPK4P57078 832 aa16.21■□□□□ 0.19
MSH5-216ENST00000484309 NEUROD2Q15784 382 aa16.21■□□□□ 0.19
MSH5-216ENST00000484309 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
MSH5-216ENST00000484309 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
MSH5-216ENST00000484309 PARP3Q9Y6F1 533 aa16.21■□□□□ 0.19
MSH5-216ENST00000484309 C10orf71Q711Q0 1435 aa16.2■□□□□ 0.18
MSH5-216ENST00000484309 YBX3P16989 372 aaKnown RBP eCLIP16.2■□□□□ 0.18
MSH5-216ENST00000484309 TMPOP42166 694 aaKnown RBP16.2■□□□□ 0.18
MSH5-216ENST00000484309 DDR1Q08345 913 aa16.2■□□□□ 0.18
MSH5-216ENST00000484309 NARFQ9UHQ1 456 aa16.2■□□□□ 0.18
MSH5-216ENST00000484309 ADAMTS8Q9UP79 889 aa16.2■□□□□ 0.18
MSH5-216ENST00000484309 EIF5P55010 431 aaKnown RBP16.19■□□□□ 0.18
MSH5-216ENST00000484309 NRXN2Q9P2S2 1712 aa16.19■□□□□ 0.18
MSH5-216ENST00000484309 PXDNLA1KZ92 1463 aa16.18■□□□□ 0.18
MSH5-216ENST00000484309 SNRPA1P09661 255 aaKnown RBP16.18■□□□□ 0.18
MSH5-216ENST00000484309 CCDC184Q52MB2 194 aa16.18■□□□□ 0.18
MSH5-216ENST00000484309 RUNDC1Q96C34 613 aa16.18■□□□□ 0.18
MSH5-216ENST00000484309 BCL2L12Q9HB09 334 aa16.18■□□□□ 0.18
MSH5-216ENST00000484309 TBC1D2BQ9UPU7 963 aa16.18■□□□□ 0.18
MSH5-216ENST00000484309 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
MSH5-216ENST00000484309 IL6STP40189 918 aaPredicted RBP16.16■□□□□ 0.18
MSH5-216ENST00000484309 NFIXQ14938 502 aa16.16■□□□□ 0.18
MSH5-216ENST00000484309 BICDL1Q6ZP65 573 aa16.16■□□□□ 0.18
MSH5-216ENST00000484309 PNISRQ8TF01 805 aaKnown RBP16.16■□□□□ 0.18
MSH5-216ENST00000484309 ANKRD31Q8N7Z5 1873 aa16.16■□□□□ 0.18
MSH5-216ENST00000484309 A0A087WZG4 1122 aa16.15■□□□□ 0.18
MSH5-216ENST00000484309 A0A0G2JLW4 131 aa16.15■□□□□ 0.18
MSH5-216ENST00000484309 TM4SF1P30408 202 aa16.15■□□□□ 0.18
MSH5-216ENST00000484309 NUP98P52948 1817 aa16.15■□□□□ 0.18
MSH5-216ENST00000484309 ARFGEF1Q9Y6D6 1849 aa16.15■□□□□ 0.18
MSH5-216ENST00000484309 UTRNP46939 3433 aa16.15■□□□□ 0.18
MSH5-216ENST00000484309 CACNA1SQ13698 1873 aa16.14■□□□□ 0.17
MSH5-216ENST00000484309 DLEC1Q9Y238 1755 aa16.14■□□□□ 0.17
MSH5-216ENST00000484309 EIF4A1P60842 406 aaKnown RBP16.14■□□□□ 0.17
MSH5-216ENST00000484309 LMOD3Q0VAK6 560 aa16.14■□□□□ 0.17
MSH5-216ENST00000484309 NPM2Q86SE8 214 aaKnown RBP16.14■□□□□ 0.17
MSH5-216ENST00000484309 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
MSH5-216ENST00000484309 NBPF26B4DH59 902 aa16.13■□□□□ 0.17
MSH5-216ENST00000484309 DPEP1P16444 411 aa16.13■□□□□ 0.17
MSH5-216ENST00000484309 NBPF10Q6P3W6 841 aaKnown RBP16.13■□□□□ 0.17
MSH5-216ENST00000484309 DZIP3Q86Y13 1208 aaKnown RBP16.13■□□□□ 0.17
MSH5-216ENST00000484309 NBPF15Q8N660 670 aa16.13■□□□□ 0.17
MSH5-216ENST00000484309 TRIM35Q9UPQ4 493 aa16.13■□□□□ 0.17
MSH5-216ENST00000484309 SENP3-EIF4A1A0A087X0R7 540 aa16.12■□□□□ 0.17
MSH5-216ENST00000484309 GIGYF1O75420 1035 aaPredicted RBP16.12■□□□□ 0.17
MSH5-216ENST00000484309 TBC1D9BQ66K14 1250 aa16.12■□□□□ 0.17
MSH5-216ENST00000484309 LAS1LQ9Y4W2 734 aaKnown RBP16.12■□□□□ 0.17
MSH5-216ENST00000484309 GOLGB1Q14789 3259 aaKnown RBP16.12■□□□□ 0.17
MSH5-216ENST00000484309 COL11A2P13942 1736 aaPredicted RBP16.11■□□□□ 0.17
MSH5-216ENST00000484309 ANP32CO43423 234 aa16.11■□□□□ 0.17
MSH5-216ENST00000484309 GRIN3BO60391 1043 aa16.11■□□□□ 0.17
MSH5-216ENST00000484309 CAMTA2O94983 1202 aa16.11■□□□□ 0.17
MSH5-216ENST00000484309 SERPINB2P05120 415 aa16.11■□□□□ 0.17
MSH5-216ENST00000484309 TGFB2P61812 414 aa16.11■□□□□ 0.17
MSH5-216ENST00000484309 NGEFQ8N5V2 710 aa16.11■□□□□ 0.17
MSH5-216ENST00000484309 CARMIL3Q8ND23 1372 aa16.11■□□□□ 0.17
MSH5-216ENST00000484309 APAF1O14727 1248 aa16.1■□□□□ 0.17
MSH5-216ENST00000484309 CHRNA5P30532 468 aa16.1■□□□□ 0.17
MSH5-216ENST00000484309 BCS1LQ9Y276 419 aa16.1■□□□□ 0.17
MSH5-216ENST00000484309 CCDC24Q8N4L8 307 aa16.09■□□□□ 0.17
MSH5-216ENST00000484309 MYL6BP14649 208 aa16.08■□□□□ 0.16
MSH5-216ENST00000484309 MRS2Q9HD23 443 aa16.08■□□□□ 0.16
MSH5-216ENST00000484309 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
MSH5-216ENST00000484309 KCNA3P22001 575 aa16.07■□□□□ 0.16
MSH5-216ENST00000484309 KRT24Q2M2I5 525 aa16.07■□□□□ 0.16
MSH5-216ENST00000484309 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
MSH5-216ENST00000484309 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
MSH5-216ENST00000484309 ANKRD36CQ5JPF3 1778 aa16.05■□□□□ 0.16
MSH5-216ENST00000484309 CHL1O00533 1208 aa16.05■□□□□ 0.16
MSH5-216ENST00000484309 ANXA1P04083 346 aa16.05■□□□□ 0.16
MSH5-216ENST00000484309 PRR5LQ6MZQ0 368 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms