RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 PYGBP11216 843 aa10.42□□□□□ -0.74
CCNC-204ENST00000482541 CNGB1Q14028 1251 aaPredicted RBP10.42□□□□□ -0.74
CCNC-204ENST00000482541 MTHFSDQ2M296 383 aaKnown RBP10.42□□□□□ -0.74
CCNC-204ENST00000482541 CFAP53Q96M91 514 aa10.42□□□□□ -0.74
CCNC-204ENST00000482541 LGR6Q9HBX8 967 aa10.42□□□□□ -0.74
CCNC-204ENST00000482541 PTCD1O75127 700 aaKnown RBP10.41□□□□□ -0.74
CCNC-204ENST00000482541 SMIM5Q71RC9 77 aa10.41□□□□□ -0.74
CCNC-204ENST00000482541 NLGN1Q8N2Q7 840 aa10.41□□□□□ -0.74
CCNC-204ENST00000482541 NLGN2Q8NFZ4 835 aa10.41□□□□□ -0.74
CCNC-204ENST00000482541 COL3A1P02461 1466 aaPredicted RBP10.41□□□□□ -0.74
CCNC-204ENST00000482541 U2SURPO15042 1029 aaKnown RBP10.41□□□□□ -0.74
CCNC-204ENST00000482541 NUDCQ9Y266 331 aa10.41□□□□□ -0.74
CCNC-204ENST00000482541 CHD4Q14839 1912 aa10.4□□□□□ -0.74
CCNC-204ENST00000482541 GRIN3BO60391 1043 aa10.4□□□□□ -0.74
CCNC-204ENST00000482541 GAS2L2Q8NHY3 880 aa10.4□□□□□ -0.74
CCNC-204ENST00000482541 ARHGEF1Q92888 912 aaKnown RBP10.4□□□□□ -0.74
CCNC-204ENST00000482541 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
CCNC-204ENST00000482541 COL5A3P25940 1745 aaPredicted RBP10.4□□□□□ -0.75
CCNC-204ENST00000482541 RFC4P35249 363 aa10.39□□□□□ -0.75
CCNC-204ENST00000482541 CRKLP46109 303 aaKnown RBP10.39□□□□□ -0.75
CCNC-204ENST00000482541 GNAT3A8MTJ3 354 aa10.38□□□□□ -0.75
CCNC-204ENST00000482541 STK25O00506 426 aa10.38□□□□□ -0.75
CCNC-204ENST00000482541 PPP2R1AP30153 589 aa10.38□□□□□ -0.75
CCNC-204ENST00000482541 PELP1Q8IZL8 1130 aaKnown RBP10.38□□□□□ -0.75
CCNC-204ENST00000482541 TSHZ2Q9NRE2 1034 aa10.38□□□□□ -0.75
CCNC-204ENST00000482541 CICQ96RK0 1608 aaPredicted RBP10.38□□□□□ -0.75
CCNC-204ENST00000482541 ADAMTS7Q9UKP4 1686 aa10.38□□□□□ -0.75
CCNC-204ENST00000482541 MYH14Q7Z406 1995 aaKnown RBP10.38□□□□□ -0.75
CCNC-204ENST00000482541 MMP10P09238 476 aa10.38□□□□□ -0.75
CCNC-204ENST00000482541 MRC1P22897 1456 aa10.38□□□□□ -0.75
CCNC-204ENST00000482541 VIRMAQ69YN4 1812 aaKnown RBP10.37□□□□□ -0.75
CCNC-204ENST00000482541 FCHSD2O94868 740 aa10.37□□□□□ -0.75
CCNC-204ENST00000482541 GYS1P13807 737 aa10.37□□□□□ -0.75
CCNC-204ENST00000482541 PRKAR2AP13861 404 aaKnown RBP10.37□□□□□ -0.75
CCNC-204ENST00000482541 SLC39A6Q13433 755 aa10.37□□□□□ -0.75
CCNC-204ENST00000482541 INTS5Q6P9B9 1019 aaKnown RBP10.37□□□□□ -0.75
CCNC-204ENST00000482541 YBX3P16989 372 aaKnown RBP eCLIP10.36□□□□□ -0.759e-9■□□□□ 8.7
CCNC-204ENST00000482541 PRKAR2BP31323 418 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 TEFQ10587 303 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 DNAJC10Q8IXB1 793 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 ZNF784Q8NCA9 323 aaPredicted RBP10.36□□□□□ -0.75
CCNC-204ENST00000482541 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
CCNC-204ENST00000482541 U2AF1L5P0DN76 240 aaPredicted RBP10.36□□□□□ -0.75
CCNC-204ENST00000482541 CYP19A1P11511 503 aaPredicted RBP10.36□□□□□ -0.75
CCNC-204ENST00000482541 TGFB2P61812 414 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 U2AF1Q01081 240 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCNC-204ENST00000482541 TTC5Q8N0Z6 440 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 PHACTR3Q96KR7 559 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 CCDC87Q9NVE4 849 aa10.36□□□□□ -0.75
CCNC-204ENST00000482541 TJP1Q07157 1748 aa10.35□□□□□ -0.75
CCNC-204ENST00000482541 FXR2P51116 673 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCNC-204ENST00000482541 TEX13AQ9BXU3 409 aaPredicted RBP10.35□□□□□ -0.75
CCNC-204ENST00000482541 PARP3Q9Y6F1 533 aa10.35□□□□□ -0.75
CCNC-204ENST00000482541 USP42Q9H9J4 1324 aaKnown RBP10.34□□□□□ -0.75
CCNC-204ENST00000482541 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.34□□□□□ -0.75
CCNC-204ENST00000482541 ZNF790Q6PG37 636 aa10.34□□□□□ -0.75
CCNC-204ENST00000482541 ZFP91Q96JP5 570 aaPredicted RBP10.34□□□□□ -0.75
CCNC-204ENST00000482541 CEMIPQ8WUJ3 1361 aa10.34□□□□□ -0.75
CCNC-204ENST00000482541 ZPR1O75312 459 aa10.33□□□□□ -0.76
CCNC-204ENST00000482541 STARD3NLO95772 234 aa10.33□□□□□ -0.76
CCNC-204ENST00000482541 KCPQ6ZWJ8 1503 aa10.33□□□□□ -0.76
CCNC-204ENST00000482541 SOS1Q07889 1333 aaPredicted RBP10.33□□□□□ -0.76
CCNC-204ENST00000482541 HTATSF1O43719 755 aaKnown RBP10.33□□□□□ -0.76
CCNC-204ENST00000482541 TM4SF1P30408 202 aa10.33□□□□□ -0.76
CCNC-204ENST00000482541 C4AP0C0L4 1744 aa10.33□□□□□ -0.76
CCNC-204ENST00000482541 KIF13BQ9NQT8 1826 aa10.32□□□□□ -0.76
CCNC-204ENST00000482541 UBR2Q8IWV8 1755 aa10.32□□□□□ -0.76
CCNC-204ENST00000482541 RTF1Q92541 710 aaKnown RBP10.32□□□□□ -0.76
CCNC-204ENST00000482541 ZNF496Q96IT1 587 aaPredicted RBP10.32□□□□□ -0.76
CCNC-204ENST00000482541 SRP68Q9UHB9 627 aaKnown RBP10.32□□□□□ -0.76
CCNC-204ENST00000482541 NARFQ9UHQ1 456 aa10.32□□□□□ -0.76
CCNC-204ENST00000482541 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
CCNC-204ENST00000482541 BTBD11A6QL63 1104 aa10.31□□□□□ -0.76
CCNC-204ENST00000482541 NEFMP07197 916 aa10.31□□□□□ -0.76
CCNC-204ENST00000482541 USPL1Q5W0Q7 1092 aa10.31□□□□□ -0.76
CCNC-204ENST00000482541 FMNL2Q96PY5 1086 aa10.31□□□□□ -0.76
CCNC-204ENST00000482541 ZBTB1Q9Y2K1 713 aa10.31□□□□□ -0.76
CCNC-204ENST00000482541 STK24Q9Y6E0 443 aa10.31□□□□□ -0.76
CCNC-204ENST00000482541 SIPA1L3O60292 1781 aaPredicted RBP10.31□□□□□ -0.76
CCNC-204ENST00000482541 A0A0G2JLW4 131 aa10.3□□□□□ -0.76
CCNC-204ENST00000482541 EIF5P55010 431 aaKnown RBP10.3□□□□□ -0.76
CCNC-204ENST00000482541 C10orf71Q711Q0 1435 aa10.3□□□□□ -0.76
CCNC-204ENST00000482541 PNNQ9H307 717 aaKnown RBP10.3□□□□□ -0.76
CCNC-204ENST00000482541 COL15A1P39059 1388 aa10.3□□□□□ -0.76
CCNC-204ENST00000482541 PXDNLA1KZ92 1463 aa10.3□□□□□ -0.76
CCNC-204ENST00000482541 A0A087WZG4 1122 aa10.3□□□□□ -0.76
CCNC-204ENST00000482541 GTPBP6O43824 516 aaPredicted RBP10.3□□□□□ -0.76
CCNC-204ENST00000482541 CANXP27824 592 aaKnown RBP10.3□□□□□ -0.76
CCNC-204ENST00000482541 RALBP1Q15311 655 aa10.3□□□□□ -0.76
CCNC-204ENST00000482541 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
CCNC-204ENST00000482541 POLRMTO00411 1230 aaKnown RBP10.29□□□□□ -0.76
CCNC-204ENST00000482541 IL6STP40189 918 aaPredicted RBP10.29□□□□□ -0.76
CCNC-204ENST00000482541 DDR1Q08345 913 aa10.29□□□□□ -0.76
CCNC-204ENST00000482541 DPEP1P16444 411 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 KCNA3P22001 575 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 NFIXQ14938 502 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 MCM10Q7L590 875 aa10.28□□□□□ -0.76
CCNC-204ENST00000482541 NPM2Q86SE8 214 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms