RNA–Protein interactions for RNA: ENST00000481020.5

NR1H3-220, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 1,704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-220ENST00000481020 SSH3Q8TE77 659 aa17.19■□□□□ 0.34
NR1H3-220ENST00000481020 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
NR1H3-220ENST00000481020 FUCA2Q9BTY2 467 aa17.19■□□□□ 0.34
NR1H3-220ENST00000481020 SH2B1Q9NRF2 756 aaPredicted RBP17.19■□□□□ 0.34
NR1H3-220ENST00000481020 FAM208AQ9UK61 1670 aaKnown RBP17.19■□□□□ 0.34
NR1H3-220ENST00000481020 SGSM2O43147 1006 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 GADD45BO75293 160 aaPredicted RBP17.18■□□□□ 0.34
NR1H3-220ENST00000481020 F13A1P00488 732 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 DMTNQ08495 405 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 HSP90AB4PQ58FF6 505 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 SLC4A10Q6U841 1118 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 TM6SF1Q9BZW5 370 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 ZRANB1Q9UGI0 708 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 CCDC171Q6TFL3 1326 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 USP42Q9H9J4 1324 aaKnown RBP17.18■□□□□ 0.34
NR1H3-220ENST00000481020 MAP3K5Q99683 1374 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 FLIIQ13045 1269 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 SYCP1Q15431 976 aa17.18■□□□□ 0.34
NR1H3-220ENST00000481020 FOXD4L5Q5VV16 416 aaPredicted RBP17.18■□□□□ 0.34
NR1H3-220ENST00000481020 FOXD4L4Q8WXT5 416 aaPredicted RBP17.18■□□□□ 0.34
NR1H3-220ENST00000481020 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
NR1H3-220ENST00000481020 KIAA1524Q8TCG1 905 aa17.17■□□□□ 0.34
NR1H3-220ENST00000481020 TTC21AQ8NDW8 1320 aa17.17■□□□□ 0.34
NR1H3-220ENST00000481020 CRYBG1Q9Y4K1 1723 aa17.17■□□□□ 0.34
NR1H3-220ENST00000481020 RUFY2Q8WXA3 655 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 SMC3Q9UQE7 1217 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 SBNO1A3KN83 1393 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 USP6P35125 1406 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 CCDC192P0DO97 292 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 POLA2Q14181 598 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 G2E3Q7L622 706 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 CHAMP1Q96JM3 812 aa17.16■□□□□ 0.34
NR1H3-220ENST00000481020 METP08581 1390 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 FLT4P35916 1363 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 ELP1O95163 1332 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 TTC41PQ6P2S7 1318 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 SYT1P21579 422 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 VPS53Q5VIR6 699 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 KCNB2Q92953 911 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 KIF1BPQ96EK5 621 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 UPF3BQ9BZI7 483 aaKnown RBP17.15■□□□□ 0.34
NR1H3-220ENST00000481020 SNX14Q9Y5W7 946 aa17.15■□□□□ 0.34
NR1H3-220ENST00000481020 PTPRUQ92729 1446 aa17.14■□□□□ 0.33
NR1H3-220ENST00000481020 PNMA6EA0A0J9YXQ4 647 aa17.14■□□□□ 0.33
NR1H3-220ENST00000481020 KIF20AO95235 890 aa17.14■□□□□ 0.33
NR1H3-220ENST00000481020 UBTFL1P0CB47 393 aaPredicted RBP17.14■□□□□ 0.33
NR1H3-220ENST00000481020 HCLS1P14317 486 aaPredicted RBP17.14■□□□□ 0.33
NR1H3-220ENST00000481020 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 F6X3S4 739 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 CAVIN2O95810 425 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 FEZ1Q99689 392 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 LSG1Q9H089 658 aaKnown RBP17.13■□□□□ 0.33
NR1H3-220ENST00000481020 CNPY2Q9Y2B0 182 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 ADGRL3Q9HAR2 1447 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 CTIFO43310 598 aaKnown RBP17.13■□□□□ 0.33
NR1H3-220ENST00000481020 ZNF710Q8N1W2 664 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 PI4K2BQ8TCG2 481 aa17.13■□□□□ 0.33
NR1H3-220ENST00000481020 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
NR1H3-220ENST00000481020 PRR36Q9H6K5 1346 aa17.12■□□□□ 0.33
NR1H3-220ENST00000481020 PDCP20941 246 aa17.12■□□□□ 0.33
NR1H3-220ENST00000481020 AK2P54819 239 aa17.12■□□□□ 0.33
NR1H3-220ENST00000481020 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
NR1H3-220ENST00000481020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.12■□□□□ 0.33
NR1H3-220ENST00000481020 ANKRD7Q92527 254 aa17.12■□□□□ 0.33
NR1H3-220ENST00000481020 ZSCAN20P17040 1043 aaPredicted RBP17.11■□□□□ 0.33
NR1H3-220ENST00000481020 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
NR1H3-220ENST00000481020 FAM200AQ8TCP9 573 aa17.11■□□□□ 0.33
NR1H3-220ENST00000481020 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
NR1H3-220ENST00000481020 GDPD2Q9HCC8 539 aa17.11■□□□□ 0.33
NR1H3-220ENST00000481020 HDAC5Q9UQL6 1122 aa17.11■□□□□ 0.33
NR1H3-220ENST00000481020 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
NR1H3-220ENST00000481020 MAP3K19Q56UN5 1328 aa17.11■□□□□ 0.33
NR1H3-220ENST00000481020 GLRX3O76003 335 aaKnown RBP17.1■□□□□ 0.33
NR1H3-220ENST00000481020 HOXB7P09629 217 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 PDCL2Q8N4E4 241 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 USP44Q9H0E7 712 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 HSP90AB2PQ58FF8 381 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 TXNDC2Q86VQ3 553 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 UNC5CLQ8IV45 518 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 RHPN1Q8TCX5 695 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
NR1H3-220ENST00000481020 DIP2AQ14689 1571 aa17.09■□□□□ 0.33
NR1H3-220ENST00000481020 TSHZ3Q63HK5 1081 aa17.09■□□□□ 0.33
NR1H3-220ENST00000481020 NOL8Q76FK4 1167 aaKnown RBP17.09■□□□□ 0.33
NR1H3-220ENST00000481020 ALDH8A1Q9H2A2 487 aaPredicted RBP17.09■□□□□ 0.33
NR1H3-220ENST00000481020 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
NR1H3-220ENST00000481020 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
NR1H3-220ENST00000481020 ACEP12821 1306 aa17.08■□□□□ 0.33
NR1H3-220ENST00000481020 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
NR1H3-220ENST00000481020 HIP1O00291 1037 aa17.08■□□□□ 0.32
NR1H3-220ENST00000481020 BCL2L12Q9HB09 334 aa17.08■□□□□ 0.32
NR1H3-220ENST00000481020 CHD2O14647 1828 aaKnown RBP17.08■□□□□ 0.32
NR1H3-220ENST00000481020 KRT85P78386 507 aa17.07■□□□□ 0.32
NR1H3-220ENST00000481020 ANKRD1Q15327 319 aa17.07■□□□□ 0.32
NR1H3-220ENST00000481020 GPATCH3Q96I76 525 aa17.07■□□□□ 0.32
NR1H3-220ENST00000481020 CYP46A1Q9Y6A2 500 aa17.07■□□□□ 0.32
NR1H3-220ENST00000481020 TNRQ92752 1358 aa17.07■□□□□ 0.32
NR1H3-220ENST00000481020 MTX1Q13505 466 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms