RNA–Protein interactions for RNA: ENST00000477325.1

RPSA-206, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 596 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-206ENST00000477325 ABHD8Q96I13 439 aa13.31□□□□□ -0.28
RPSA-206ENST00000477325 KIF24Q5T7B8 1368 aa13.31□□□□□ -0.28
RPSA-206ENST00000477325 RFC4P35249 363 aa13.3□□□□□ -0.28
RPSA-206ENST00000477325 CTCFP49711 727 aaPredicted RBP13.3□□□□□ -0.28
RPSA-206ENST00000477325 FKBP8Q14318 412 aa13.3□□□□□ -0.28
RPSA-206ENST00000477325 TONSLQ96HA7 1378 aa13.3□□□□□ -0.28
RPSA-206ENST00000477325 NRXN2Q9P2S2 1712 aa13.3□□□□□ -0.28
RPSA-206ENST00000477325 DICER1Q9UPY3 1922 aaKnown RBP13.29□□□□□ -0.28
RPSA-206ENST00000477325 PHKG2P15735 406 aa13.29□□□□□ -0.28
RPSA-206ENST00000477325 WBP1LQ9NX94 342 aa13.29□□□□□ -0.28
RPSA-206ENST00000477325 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.29□□□□□ -0.28
RPSA-206ENST00000477325 SRP68Q9UHB9 627 aaKnown RBP13.29□□□□□ -0.28
RPSA-206ENST00000477325 USP42Q9H9J4 1324 aaKnown RBP13.29□□□□□ -0.28
RPSA-206ENST00000477325 AFDNP55196 1824 aaKnown RBP13.29□□□□□ -0.28
RPSA-206ENST00000477325 ANKRD26Q9UPS8 1709 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 NFKBIEO00221 500 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 POLRMTO00411 1230 aaKnown RBP13.28□□□□□ -0.28
RPSA-206ENST00000477325 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 TM4SF1P30408 202 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 LBX1P52954 281 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 GGNBP2Q9H3C7 697 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 SPG7Q9UQ90 795 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 PASKQ96RG2 1323 aa13.28□□□□□ -0.28
RPSA-206ENST00000477325 VEGFBP49765 207 aa13.27□□□□□ -0.29
RPSA-206ENST00000477325 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
RPSA-206ENST00000477325 MLLT1Q03111 559 aaPredicted RBP13.26□□□□□ -0.29
RPSA-206ENST00000477325 TESK2Q96S53 571 aa13.26□□□□□ -0.29
RPSA-206ENST00000477325 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
RPSA-206ENST00000477325 TJP1Q07157 1748 aa13.25□□□□□ -0.29
RPSA-206ENST00000477325 HSPA8P11142 646 aaKnown RBP13.25□□□□□ -0.29
RPSA-206ENST00000477325 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
RPSA-206ENST00000477325 SIN3AQ96ST3 1273 aa13.25□□□□□ -0.29
RPSA-206ENST00000477325 CARD11Q9BXL7 1154 aa13.25□□□□□ -0.29
RPSA-206ENST00000477325 FER1L6Q2WGJ9 1857 aa13.25□□□□□ -0.29
RPSA-206ENST00000477325 EMILIN1Q9Y6C2 1016 aa13.24□□□□□ -0.29
RPSA-206ENST00000477325 AIDAQ96BJ3 306 aa13.23□□□□□ -0.29
RPSA-206ENST00000477325 EYA1Q99502 592 aa13.23□□□□□ -0.29
RPSA-206ENST00000477325 PDE4DIPQ5VU43 2346 aa13.22□□□□□ -0.29
RPSA-206ENST00000477325 ERVV-2B6SEH9 535 aa13.22□□□□□ -0.29
RPSA-206ENST00000477325 PITPNM1O00562 1244 aa13.22□□□□□ -0.29
RPSA-206ENST00000477325 CRKLP46109 303 aaKnown RBP13.22□□□□□ -0.29
RPSA-206ENST00000477325 ITGBL1O95965 494 aaPredicted RBP13.21□□□□□ -0.29
RPSA-206ENST00000477325 DPY19L2Q6NUT2 758 aa13.21□□□□□ -0.29
RPSA-206ENST00000477325 TTLL6Q8N841 843 aa13.21□□□□□ -0.29
RPSA-206ENST00000477325 ADAMTSL1Q8N6G6 1762 aa13.21□□□□□ -0.29
RPSA-206ENST00000477325 THSD7BQ9C0I4 1608 aa13.21□□□□□ -0.3
RPSA-206ENST00000477325 INTS5Q6P9B9 1019 aaKnown RBP13.2□□□□□ -0.3
RPSA-206ENST00000477325 ANKRD31Q8N7Z5 1873 aa13.2□□□□□ -0.3
RPSA-206ENST00000477325 SCN4AP35499 1836 aa13.2□□□□□ -0.3
RPSA-206ENST00000477325 CARMIL3Q8ND23 1372 aa13.2□□□□□ -0.3
RPSA-206ENST00000477325 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
RPSA-206ENST00000477325 RASSF10A6NK89 507 aa13.19□□□□□ -0.3
RPSA-206ENST00000477325 TMEM88BA6NKF7 163 aa13.19□□□□□ -0.3
RPSA-206ENST00000477325 DDNO94850 711 aaPredicted RBP13.19□□□□□ -0.3
RPSA-206ENST00000477325 NFIXQ14938 502 aa13.18□□□□□ -0.3
RPSA-206ENST00000477325 ERFEQ4G0M1 354 aa13.18□□□□□ -0.3
RPSA-206ENST00000477325 USPL1Q5W0Q7 1092 aa13.18□□□□□ -0.3
RPSA-206ENST00000477325 COL11A2P13942 1736 aaPredicted RBP13.18□□□□□ -0.3
RPSA-206ENST00000477325 CCDC85CA6NKD9 419 aa13.17□□□□□ -0.3
RPSA-206ENST00000477325 PTCD1O75127 700 aaKnown RBP13.17□□□□□ -0.3
RPSA-206ENST00000477325 LDHDQ86WU2 507 aa13.17□□□□□ -0.3
RPSA-206ENST00000477325 BCL2L12Q9HB09 334 aa13.17□□□□□ -0.3
RPSA-206ENST00000477325 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
RPSA-206ENST00000477325 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
RPSA-206ENST00000477325 C2CD5Q86YS7 1000 aa13.16□□□□□ -0.3
RPSA-206ENST00000477325 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
RPSA-206ENST00000477325 SOS1Q07889 1333 aaPredicted RBP13.15□□□□□ -0.3
RPSA-206ENST00000477325 ST20-MTHFSA0A0A6YYL1 179 aa13.15□□□□□ -0.3
RPSA-206ENST00000477325 NEUROD1Q13562 356 aa13.15□□□□□ -0.3
RPSA-206ENST00000477325 TAF1DQ9H5J8 278 aaPredicted RBP13.15□□□□□ -0.3
RPSA-206ENST00000477325 WDR33Q9C0J8 1336 aaKnown RBP13.14□□□□□ -0.31
RPSA-206ENST00000477325 SERPINB2P05120 415 aa13.14□□□□□ -0.31
RPSA-206ENST00000477325 MAP2K1Q02750 393 aaPredicted RBP13.14□□□□□ -0.31
RPSA-206ENST00000477325 DEFB115Q30KQ5 88 aa13.14□□□□□ -0.31
RPSA-206ENST00000477325 CARD14Q9BXL6 1004 aa13.14□□□□□ -0.31
RPSA-206ENST00000477325 NARFQ9UHQ1 456 aa13.14□□□□□ -0.31
RPSA-206ENST00000477325 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
RPSA-206ENST00000477325 SLX4Q8IY92 1834 aa13.13□□□□□ -0.31
RPSA-206ENST00000477325 H0YIN7 160 aa13.13□□□□□ -0.31
RPSA-206ENST00000477325 C21orf2O43822 256 aa13.13□□□□□ -0.31
RPSA-206ENST00000477325 ZPR1O75312 459 aa13.13□□□□□ -0.31
RPSA-206ENST00000477325 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
RPSA-206ENST00000477325 PPM1GO15355 546 aaPredicted RBP13.12□□□□□ -0.31
RPSA-206ENST00000477325 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
RPSA-206ENST00000477325 CABP4P57796 275 aa13.12□□□□□ -0.31
RPSA-206ENST00000477325 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
RPSA-206ENST00000477325 ARFGEF2Q9Y6D5 1785 aa13.12□□□□□ -0.31
RPSA-206ENST00000477325 COL15A1P39059 1388 aa13.11□□□□□ -0.31
RPSA-206ENST00000477325 DNAJC10Q8IXB1 793 aa13.11□□□□□ -0.31
RPSA-206ENST00000477325 NFATC2IPQ8NCF5 419 aa13.11□□□□□ -0.31
RPSA-206ENST00000477325 POLKQ9UBT6 870 aa13.11□□□□□ -0.31
RPSA-206ENST00000477325 SCN11AQ9UI33 1791 aa13.11□□□□□ -0.31
RPSA-206ENST00000477325 CACNA1SQ13698 1873 aa13.1□□□□□ -0.31
RPSA-206ENST00000477325 CYP19A1P11511 503 aaPredicted RBP13.1□□□□□ -0.31
RPSA-206ENST00000477325 TAOK3Q9H2K8 898 aa13.1□□□□□ -0.31
RPSA-206ENST00000477325 MKI67P46013 3256 aaKnown RBP13.1□□□□□ -0.31
RPSA-206ENST00000477325 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
RPSA-206ENST00000477325 CASP8AP2Q9UKL3 1982 aa13.09□□□□□ -0.31
RPSA-206ENST00000477325 SLC24A1O60721 1099 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms