RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 PRAMEF22A3QJZ6 481 aa14.22□□□□□ -0.13
NUP188-205ENST00000477069 DDIT3P35638 169 aa14.22□□□□□ -0.13
NUP188-205ENST00000477069 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
NUP188-205ENST00000477069 SHANK3Q9BYB0 1731 aa14.21□□□□□ -0.13
NUP188-205ENST00000477069 ANXA1P04083 346 aa14.21□□□□□ -0.13
NUP188-205ENST00000477069 PROSER3Q2NL68 480 aa14.21□□□□□ -0.13
NUP188-205ENST00000477069 BRINP3Q76B58 766 aa14.21□□□□□ -0.13
NUP188-205ENST00000477069 RAPGEF4Q8WZA2 1011 aa14.21□□□□□ -0.13
NUP188-205ENST00000477069 HSCBQ8IWL3 235 aa14.21□□□□□ -0.13
NUP188-205ENST00000477069 NLRP2Q9NX02 1062 aa14.21□□□□□ -0.13
NUP188-205ENST00000477069 NHSL1Q5SYE7 1610 aa14.21□□□□□ -0.14
NUP188-205ENST00000477069 NBPF7P0C2Y1 421 aaPredicted RBP14.21□□□□□ -0.14
NUP188-205ENST00000477069 SLC52A2Q9HAB3 445 aa14.21□□□□□ -0.14
NUP188-205ENST00000477069 TATP17735 454 aaPredicted RBP14.2□□□□□ -0.14
NUP188-205ENST00000477069 USP26Q9BXU7 913 aa14.2□□□□□ -0.14
NUP188-205ENST00000477069 STAP2Q9UGK3 403 aa14.2□□□□□ -0.14
NUP188-205ENST00000477069 SPG7Q9UQ90 795 aa14.2□□□□□ -0.14
NUP188-205ENST00000477069 UBR2Q8IWV8 1755 aa14.2□□□□□ -0.14
NUP188-205ENST00000477069 PAPPAQ13219 1627 aa14.19□□□□□ -0.14
NUP188-205ENST00000477069 AK9Q5TCS8 1911 aa14.19□□□□□ -0.14
NUP188-205ENST00000477069 PDIA6Q15084 440 aa14.19□□□□□ -0.14
NUP188-205ENST00000477069 CD2BP2O95400 341 aaKnown RBP14.19□□□□□ -0.14
NUP188-205ENST00000477069 CHRNA2Q15822 529 aa14.19□□□□□ -0.14
NUP188-205ENST00000477069 SOS2Q07890 1332 aaPredicted RBP14.19□□□□□ -0.14
NUP188-205ENST00000477069 MX1P20591 662 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 ZNF790Q6PG37 636 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 PPP1R42Q7Z4L9 355 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 KSR2Q6VAB6 950 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 AOX1Q06278 1338 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 ALDH1L1O75891 902 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 MTX1Q13505 466 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 IFNL2Q8IZJ0 200 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 HYPKQ9NX55 129 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 MAP3K2Q9Y2U5 619 aa14.18□□□□□ -0.14
NUP188-205ENST00000477069 CYP27B1O15528 508 aa14.17□□□□□ -0.14
NUP188-205ENST00000477069 DDX21Q9NR30 783 aaKnown RBP eCLIP14.17□□□□□ -0.14
NUP188-205ENST00000477069 ARFGEF2Q9Y6D5 1785 aa14.17□□□□□ -0.14
NUP188-205ENST00000477069 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
NUP188-205ENST00000477069 RAB11FIP3O75154 756 aa14.17□□□□□ -0.14
NUP188-205ENST00000477069 SPRYD3Q8NCJ5 442 aa14.16□□□□□ -0.14
NUP188-205ENST00000477069 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
NUP188-205ENST00000477069 CHMP5Q9NZZ3 219 aa14.16□□□□□ -0.14
NUP188-205ENST00000477069 UTYO14607 1347 aa14.16□□□□□ -0.14
NUP188-205ENST00000477069 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
NUP188-205ENST00000477069 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
NUP188-205ENST00000477069 DCAF5Q96JK2 942 aa14.16□□□□□ -0.14
NUP188-205ENST00000477069 SLC39A6Q13433 755 aa14.15□□□□□ -0.14
NUP188-205ENST00000477069 NFATC2IPQ8NCF5 419 aa14.15□□□□□ -0.14
NUP188-205ENST00000477069 CSB-PGBD3P0DP91 1061 aa14.15□□□□□ -0.14
NUP188-205ENST00000477069 AFDNP55196 1824 aaKnown RBP14.15□□□□□ -0.14
NUP188-205ENST00000477069 SRGAP3O43295 1099 aa14.14□□□□□ -0.15
NUP188-205ENST00000477069 GSE1Q14687 1217 aa14.14□□□□□ -0.15
NUP188-205ENST00000477069 LRP10Q7Z4F1 713 aa14.14□□□□□ -0.15
NUP188-205ENST00000477069 ZNF335Q9H4Z2 1342 aaPredicted RBP14.14□□□□□ -0.15
NUP188-205ENST00000477069 K7ELQ4 463 aaPredicted RBP14.14□□□□□ -0.15
NUP188-205ENST00000477069 ERC2O15083 957 aa14.14□□□□□ -0.15
NUP188-205ENST00000477069 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
NUP188-205ENST00000477069 RABEP1Q15276 862 aa14.14□□□□□ -0.15
NUP188-205ENST00000477069 RHPN1Q8TCX5 695 aa14.14□□□□□ -0.15
NUP188-205ENST00000477069 SURF6O75683 361 aaKnown RBP14.13□□□□□ -0.15
NUP188-205ENST00000477069 NUP188Q5SRE5 1749 aa14.13□□□□□ -0.15
NUP188-205ENST00000477069 REC8O95072 547 aa14.13□□□□□ -0.15
NUP188-205ENST00000477069 LINS1Q8NG48 757 aa14.13□□□□□ -0.15
NUP188-205ENST00000477069 ZNF496Q96IT1 587 aaPredicted RBP14.13□□□□□ -0.15
NUP188-205ENST00000477069 SLAIN2Q9P270 581 aa14.13□□□□□ -0.15
NUP188-205ENST00000477069 CWF19L2Q2TBE0 894 aaKnown RBP14.12□□□□□ -0.15
NUP188-205ENST00000477069 KIF1BPQ96EK5 621 aa14.12□□□□□ -0.15
NUP188-205ENST00000477069 IL1RAPL2Q9NP60 686 aa14.12□□□□□ -0.15
NUP188-205ENST00000477069 USP42Q9H9J4 1324 aaKnown RBP14.12□□□□□ -0.15
NUP188-205ENST00000477069 TOGARAM1Q9Y4F4 1720 aa14.12□□□□□ -0.15
NUP188-205ENST00000477069 HSP90AB1P08238 724 aaKnown RBP14.12□□□□□ -0.15
NUP188-205ENST00000477069 PI4K2BQ8TCG2 481 aa14.12□□□□□ -0.15
NUP188-205ENST00000477069 KAZALD1Q96I82 304 aa14.12□□□□□ -0.15
NUP188-205ENST00000477069 ESYT1Q9BSJ8 1104 aa14.11□□□□□ -0.15
NUP188-205ENST00000477069 CIZ1Q9ULV3 898 aaPredicted RBP14.11□□□□□ -0.15
NUP188-205ENST00000477069 KCPQ6ZWJ8 1503 aa14.11□□□□□ -0.15
NUP188-205ENST00000477069 DDX58O95786 925 aaKnown RBP14.11□□□□□ -0.15
NUP188-205ENST00000477069 IGKV5-2P06315 115 aa14.11□□□□□ -0.15
NUP188-205ENST00000477069 CHMLP26374 656 aa14.11□□□□□ -0.15
NUP188-205ENST00000477069 UNC5CLQ8IV45 518 aa14.11□□□□□ -0.15
NUP188-205ENST00000477069 GRM8O00222 908 aa14.1□□□□□ -0.15
NUP188-205ENST00000477069 NUTM1Q86Y26 1132 aa14.1□□□□□ -0.15
NUP188-205ENST00000477069 SNRPA1P09661 255 aaKnown RBP14.1□□□□□ -0.15
NUP188-205ENST00000477069 HSP90AB4PQ58FF6 505 aa14.1□□□□□ -0.15
NUP188-205ENST00000477069 IL17RAQ96F46 866 aa14.1□□□□□ -0.15
NUP188-205ENST00000477069 C9orf78Q9NZ63 289 aaPredicted RBP14.1□□□□□ -0.15
NUP188-205ENST00000477069 PCDH11XQ9BZA7 1347 aa14.09□□□□□ -0.15
NUP188-205ENST00000477069 PCDH11YQ9BZA8 1340 aa14.09□□□□□ -0.15
NUP188-205ENST00000477069 MCM4P33991 863 aa14.09□□□□□ -0.15
NUP188-205ENST00000477069 SUCLG2Q96I99 432 aa14.09□□□□□ -0.15
NUP188-205ENST00000477069 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
NUP188-205ENST00000477069 FMNL2Q96PY5 1086 aa14.08□□□□□ -0.15
NUP188-205ENST00000477069 HDAC5Q9UQL6 1122 aa14.08□□□□□ -0.15
NUP188-205ENST00000477069 USP16Q9Y5T5 823 aa14.08□□□□□ -0.15
NUP188-205ENST00000477069 TJP1Q07157 1748 aa14.08□□□□□ -0.16
NUP188-205ENST00000477069 RAB3GAP1Q15042 981 aa14.08□□□□□ -0.16
NUP188-205ENST00000477069 LARP1Q6PKG0 1096 aaKnown RBP14.08□□□□□ -0.16
NUP188-205ENST00000477069 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
NUP188-205ENST00000477069 NEURL1BA8MQ27 555 aa14.08□□□□□ -0.16
NUP188-205ENST00000477069 AIMP1Q12904 312 aaKnown RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 140.1 ms