RNA–Protein interactions for RNA: ENST00000475423.1

DKC1-208, Transcript of dyskerin pseudouridine synthase 1, humanhuman

TSL 2

Gene DKC1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-208ENST00000475423 ZBTB1Q9Y2K1 713 aa22.22■■□□□ 1.15
DKC1-208ENST00000475423 U2SURPO15042 1029 aaKnown RBP22.21■■□□□ 1.15
DKC1-208ENST00000475423 IL17REQ8NFR9 667 aa22.21■■□□□ 1.15
DKC1-208ENST00000475423 GAS2L2Q8NHY3 880 aa22.2■■□□□ 1.14
DKC1-208ENST00000475423 COL15A1P39059 1388 aa22.2■■□□□ 1.14
DKC1-208ENST00000475423 GNAT3A8MTJ3 354 aa22.19■■□□□ 1.14
DKC1-208ENST00000475423 CNGB1Q14028 1251 aaPredicted RBP22.19■■□□□ 1.14
DKC1-208ENST00000475423 NFIXQ14938 502 aa22.19■■□□□ 1.14
DKC1-208ENST00000475423 DALRD3Q5D0E6 543 aaKnown RBP22.19■■□□□ 1.14
DKC1-208ENST00000475423 BCL2L12Q9HB09 334 aa22.19■■□□□ 1.14
DKC1-208ENST00000475423 HSPA6P17066 643 aa22.18■■□□□ 1.14
DKC1-208ENST00000475423 CHRNA5P30532 468 aa22.18■■□□□ 1.14
DKC1-208ENST00000475423 AFDNP55196 1824 aaKnown RBP22.17■■□□□ 1.14
DKC1-208ENST00000475423 NRXN2Q9P2S2 1712 aa22.17■■□□□ 1.14
DKC1-208ENST00000475423 STARD3NLO95772 234 aa22.17■■□□□ 1.14
DKC1-208ENST00000475423 TTC5Q8N0Z6 440 aa22.17■■□□□ 1.14
DKC1-208ENST00000475423 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
DKC1-208ENST00000475423 CANXP27824 592 aaKnown RBP22.16■■□□□ 1.14
DKC1-208ENST00000475423 EIF5P55010 431 aaKnown RBP22.16■■□□□ 1.14
DKC1-208ENST00000475423 TEFQ10587 303 aa22.16■■□□□ 1.14
DKC1-208ENST00000475423 ZNF790Q6PG37 636 aa22.16■■□□□ 1.14
DKC1-208ENST00000475423 ZNF496Q96IT1 587 aaPredicted RBP22.16■■□□□ 1.14
DKC1-208ENST00000475423 CEMIPQ8WUJ3 1361 aa22.14■■□□□ 1.14
DKC1-208ENST00000475423 HEG1Q9ULI3 1381 aa22.14■■□□□ 1.14
DKC1-208ENST00000475423 C9orf131Q5VYM1 1079 aa22.14■■□□□ 1.13
DKC1-208ENST00000475423 PHACTR3Q96KR7 559 aa22.14■■□□□ 1.13
DKC1-208ENST00000475423 TEX13AQ9BXU3 409 aaPredicted RBP22.14■■□□□ 1.13
DKC1-208ENST00000475423 RSPH6AQ9H0K4 717 aa22.14■■□□□ 1.13
DKC1-208ENST00000475423 SERPINB2P05120 415 aa22.13■■□□□ 1.13
DKC1-208ENST00000475423 CFAP53Q96M91 514 aa22.13■■□□□ 1.13
DKC1-208ENST00000475423 A0A087WZG4 1122 aa22.11■■□□□ 1.13
DKC1-208ENST00000475423 TOMM70O94826 608 aa22.11■■□□□ 1.13
DKC1-208ENST00000475423 PRKAR2BP31323 418 aa22.11■■□□□ 1.13
DKC1-208ENST00000475423 SBF1O95248 1867 aa22.11■■□□□ 1.13
DKC1-208ENST00000475423 FMNL2Q96PY5 1086 aa22.1■■□□□ 1.13
DKC1-208ENST00000475423 NMRK2Q9NPI5 230 aa22.1■■□□□ 1.13
DKC1-208ENST00000475423 PPP2R1AP30153 589 aa22.09■■□□□ 1.13
DKC1-208ENST00000475423 IL6STP40189 918 aaPredicted RBP22.09■■□□□ 1.13
DKC1-208ENST00000475423 PIAS4Q8N2W9 510 aaPredicted RBP22.09■■□□□ 1.13
DKC1-208ENST00000475423 NUDCQ9Y266 331 aa22.09■■□□□ 1.13
DKC1-208ENST00000475423 DLEC1Q9Y238 1755 aa22.09■■□□□ 1.13
DKC1-208ENST00000475423 RNF181Q9P0P0 153 aa22.08■■□□□ 1.13
DKC1-208ENST00000475423 BTBD11A6QL63 1104 aa22.07■■□□□ 1.12
DKC1-208ENST00000475423 KCNQ3O43525 872 aa22.07■■□□□ 1.12
DKC1-208ENST00000475423 A1BGP04217 495 aa22.06■■□□□ 1.12
DKC1-208ENST00000475423 TBC1D9BQ66K14 1250 aa22.06■■□□□ 1.12
DKC1-208ENST00000475423 CARMIL3Q8ND23 1372 aa22.06■■□□□ 1.12
DKC1-208ENST00000475423 SCN7AQ01118 1682 aa22.05■■□□□ 1.12
DKC1-208ENST00000475423 U2AF1L5P0DN76 240 aaPredicted RBP22.05■■□□□ 1.12
DKC1-208ENST00000475423 U2AF1Q01081 240 aaKnown RBP eCLIP22.05■■□□□ 1.12
DKC1-208ENST00000475423 BICDL1Q6ZP65 573 aa22.05■■□□□ 1.12
DKC1-208ENST00000475423 C2CD5Q86YS7 1000 aa22.05■■□□□ 1.12
DKC1-208ENST00000475423 TTLL6Q8N841 843 aa22.05■■□□□ 1.12
DKC1-208ENST00000475423 TBC1D2BQ9UPU7 963 aa22.05■■□□□ 1.12
DKC1-208ENST00000475423 KDM2BQ8NHM5 1336 aa22.05■■□□□ 1.12
DKC1-208ENST00000475423 H0YIN7 160 aa22.04■■□□□ 1.12
DKC1-208ENST00000475423 ANKRD31Q8N7Z5 1873 aa22.03■■□□□ 1.12
DKC1-208ENST00000475423 APLP1P51693 650 aa22.02■■□□□ 1.12
DKC1-208ENST00000475423 RBM46Q8TBY0 533 aaKnown RBP22.02■■□□□ 1.12
DKC1-208ENST00000475423 BRIP1Q9BX63 1249 aa22.02■■□□□ 1.12
DKC1-208ENST00000475423 PDZRN3Q9UPQ7 1066 aa22.02■■□□□ 1.12
DKC1-208ENST00000475423 ZNF330Q9Y3S2 320 aaPredicted RBP22.02■■□□□ 1.12
DKC1-208ENST00000475423 USP16Q9Y5T5 823 aa22.02■■□□□ 1.12
DKC1-208ENST00000475423 ZC3H4Q9UPT8 1303 aaKnown RBP22.02■■□□□ 1.12
DKC1-208ENST00000475423 CAMTA2O94983 1202 aa22.01■■□□□ 1.11
DKC1-208ENST00000475423 PRELPP51888 382 aa22.01■■□□□ 1.11
DKC1-208ENST00000475423 RASSF7Q02833 373 aa22.01■■□□□ 1.11
DKC1-208ENST00000475423 PRR5LQ6MZQ0 368 aa22.01■■□□□ 1.11
DKC1-208ENST00000475423 RTF1Q92541 710 aaKnown RBP22.01■■□□□ 1.11
DKC1-208ENST00000475423 HTATSF1O43719 755 aaKnown RBP22■■□□□ 1.11
DKC1-208ENST00000475423 LMNB1P20700 586 aa22■■□□□ 1.11
DKC1-208ENST00000475423 MCM10Q7L590 875 aa22■■□□□ 1.11
DKC1-208ENST00000475423 PDE6BP35913 854 aa21.99■■□□□ 1.11
DKC1-208ENST00000475423 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
DKC1-208ENST00000475423 SETDB2Q96T68 719 aa21.99■■□□□ 1.11
DKC1-208ENST00000475423 PRAMEF22A3QJZ6 481 aa21.98■■□□□ 1.11
DKC1-208ENST00000475423 SNRPA1P09661 255 aaKnown RBP21.98■■□□□ 1.11
DKC1-208ENST00000475423 DZIP3Q86Y13 1208 aaKnown RBP21.98■■□□□ 1.11
DKC1-208ENST00000475423 C16orf71Q8IYS4 520 aaPredicted RBP21.98■■□□□ 1.11
DKC1-208ENST00000475423 DNAJC5GQ8N7S2 189 aa21.98■■□□□ 1.11
DKC1-208ENST00000475423 RRAGCQ9HB90 399 aa21.98■■□□□ 1.11
DKC1-208ENST00000475423 TNRC6CQ9HCJ0 1690 aaKnown RBP21.98■■□□□ 1.11
DKC1-208ENST00000475423 BCORQ6W2J9 1755 aa21.97■■□□□ 1.11
DKC1-208ENST00000475423 NFKBIEO00221 500 aa21.97■■□□□ 1.11
DKC1-208ENST00000475423 FSTL1Q12841 308 aa21.97■■□□□ 1.11
DKC1-208ENST00000475423 DCTN1Q14203 1278 aa21.97■■□□□ 1.11
DKC1-208ENST00000475423 CCDC88AQ3V6T2 1871 aa21.96■■□□□ 1.11
DKC1-208ENST00000475423 CCDC24Q8N4L8 307 aa21.96■■□□□ 1.11
DKC1-208ENST00000475423 COL11A2P13942 1736 aaPredicted RBP21.95■■□□□ 1.1
DKC1-208ENST00000475423 PIP4K2AP48426 406 aaPredicted RBP21.95■■□□□ 1.1
DKC1-208ENST00000475423 CLEC4GQ6UXB4 293 aa21.95■■□□□ 1.1
DKC1-208ENST00000475423 CNBD1Q8NA66 436 aa21.95■■□□□ 1.1
DKC1-208ENST00000475423 ZNF622Q969S3 477 aaKnown RBP eCLIP21.95■■□□□ 1.11e-21■□□□□ 8.7
DKC1-208ENST00000475423 GLTPD2A6NH11 291 aa21.94■■□□□ 1.1
DKC1-208ENST00000475423 TAF7Q15545 349 aaPredicted RBP21.94■■□□□ 1.1
DKC1-208ENST00000475423 FER1L6Q2WGJ9 1857 aa21.92■■□□□ 1.1
DKC1-208ENST00000475423 NBPF26B4DH59 902 aa21.92■■□□□ 1.1
DKC1-208ENST00000475423 RGL2O15211 777 aa21.92■■□□□ 1.1
DKC1-208ENST00000475423 C21orf2O43822 256 aa21.92■■□□□ 1.1
DKC1-208ENST00000475423 SRGNP10124 158 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms