RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.73
TM9SF3-204ENST00000475401 TMEM88BA6NKF7 163 aa10.5□□□□□ -0.73
TM9SF3-204ENST00000475401 TEAD4Q15561 434 aa10.5□□□□□ -0.73
TM9SF3-204ENST00000475401 PRIMPOLQ96LW4 560 aa10.5□□□□□ -0.73
TM9SF3-204ENST00000475401 FOXO3O43524 673 aa10.49□□□□□ -0.73
TM9SF3-204ENST00000475401 ATP2B4P23634 1241 aa10.49□□□□□ -0.73
TM9SF3-204ENST00000475401 WEE1P30291 646 aa10.49□□□□□ -0.73
TM9SF3-204ENST00000475401 NOS2P35228 1153 aa10.49□□□□□ -0.73
TM9SF3-204ENST00000475401 PTSQ03393 145 aa10.49□□□□□ -0.73
TM9SF3-204ENST00000475401 L3MBTL2Q969R5 705 aa10.49□□□□□ -0.73
TM9SF3-204ENST00000475401 A0A1B0GTH6 734 aa10.48□□□□□ -0.73
TM9SF3-204ENST00000475401 POTECB2RU33 542 aa10.48□□□□□ -0.73
TM9SF3-204ENST00000475401 TATP17735 454 aaPredicted RBP10.48□□□□□ -0.73
TM9SF3-204ENST00000475401 STAG2Q8N3U4 1231 aa10.48□□□□□ -0.73
TM9SF3-204ENST00000475401 DYRK1BQ9Y463 629 aa10.48□□□□□ -0.73
TM9SF3-204ENST00000475401 USP3Q9Y6I4 520 aa10.48□□□□□ -0.73
TM9SF3-204ENST00000475401 HOMEZQ8IX15 550 aa10.47□□□□□ -0.73
TM9SF3-204ENST00000475401 GAS2L1Q99501 681 aaPredicted RBP10.47□□□□□ -0.73
TM9SF3-204ENST00000475401 PARP3Q9Y6F1 533 aa10.47□□□□□ -0.73
TM9SF3-204ENST00000475401 PDIA4P13667 645 aaKnown RBP10.46□□□□□ -0.73
TM9SF3-204ENST00000475401 PGBD3Q8N328 593 aa10.46□□□□□ -0.73
TM9SF3-204ENST00000475401 C1orf216Q8TAB5 229 aa10.46□□□□□ -0.73
TM9SF3-204ENST00000475401 CXXC1Q9P0U4 656 aaPredicted RBP10.46□□□□□ -0.73
TM9SF3-204ENST00000475401 C21orf2O43822 256 aa10.45□□□□□ -0.74
TM9SF3-204ENST00000475401 C2orf49Q9BVC5 232 aaPredicted RBP10.45□□□□□ -0.74
TM9SF3-204ENST00000475401 ZDHHC3Q9NYG2 299 aa10.45□□□□□ -0.74
TM9SF3-204ENST00000475401 MTMR7Q9Y216 660 aa10.45□□□□□ -0.74
TM9SF3-204ENST00000475401 F11P03951 625 aa10.44□□□□□ -0.74
TM9SF3-204ENST00000475401 OCLNQ16625 522 aa10.44□□□□□ -0.74
TM9SF3-204ENST00000475401 RIPOR1Q6ZS17 1223 aa10.44□□□□□ -0.74
TM9SF3-204ENST00000475401 CCDC155Q8N6L0 562 aa10.44□□□□□ -0.74
TM9SF3-204ENST00000475401 CARNS1A5YM72 827 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 EML1O00423 815 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 PTCD1O75127 700 aaKnown RBP10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 HIRAP54198 1017 aaPredicted RBP10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 ARSJQ5FYB0 599 aaPredicted RBP10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 BICDL1Q6ZP65 573 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 ZNF295-AS1Q8N0V1 137 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 ZDHHC1Q8WTX9 485 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 GPAMQ9HCL2 828 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 NEUROD4Q9HD90 331 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 HCN4Q9Y3Q4 1203 aa10.43□□□□□ -0.74
TM9SF3-204ENST00000475401 SLC35F4A4IF30 521 aa10.42□□□□□ -0.74
TM9SF3-204ENST00000475401 H7C1W4 665 aa10.42□□□□□ -0.74
TM9SF3-204ENST00000475401 FKBP5Q13451 457 aaPredicted RBP10.42□□□□□ -0.74
TM9SF3-204ENST00000475401 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
TM9SF3-204ENST00000475401 SSFA2P28290 1259 aa10.41□□□□□ -0.74
TM9SF3-204ENST00000475401 MSX1P28360 303 aa10.41□□□□□ -0.74
TM9SF3-204ENST00000475401 C1orf53Q5VUE5 145 aa10.41□□□□□ -0.74
TM9SF3-204ENST00000475401 MKNK1Q9BUB5 465 aa10.41□□□□□ -0.74
TM9SF3-204ENST00000475401 GJA3Q9Y6H8 435 aa10.41□□□□□ -0.74
TM9SF3-204ENST00000475401 SENP3-EIF4A1A0A087X0R7 540 aa10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 HIF1AQ16665 826 aa10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 EFHC2Q5JST6 749 aa10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 ALDH16A1Q8IZ83 802 aa10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 RHPN1Q8TCX5 695 aa10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 PHACTR1Q9C0D0 580 aa10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 NXF1Q9UBU9 619 aaKnown RBP10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 GPC6Q9Y625 555 aaPredicted RBP10.4□□□□□ -0.74
TM9SF3-204ENST00000475401 TXLNAP40222 546 aa10.39□□□□□ -0.75
TM9SF3-204ENST00000475401 SH3PXD2AQ5TCZ1 1133 aa10.39□□□□□ -0.75
TM9SF3-204ENST00000475401 POTEAQ6S8J7 498 aa10.39□□□□□ -0.75
TM9SF3-204ENST00000475401 COL26A1Q96A83 441 aa10.39□□□□□ -0.75
TM9SF3-204ENST00000475401 GMCL1Q96IK5 515 aa10.39□□□□□ -0.75
TM9SF3-204ENST00000475401 TRAIPQ9BWF2 469 aa10.39□□□□□ -0.75
TM9SF3-204ENST00000475401 PPFIA3O75145 1194 aa10.38□□□□□ -0.75
TM9SF3-204ENST00000475401 BRD1O95696 1058 aa10.38□□□□□ -0.75
TM9SF3-204ENST00000475401 ITGA6P23229 1130 aa10.38□□□□□ -0.75
TM9SF3-204ENST00000475401 NPAS3Q8IXF0 933 aa10.38□□□□□ -0.75
TM9SF3-204ENST00000475401 SLAIN2Q9P270 581 aa10.38□□□□□ -0.75
TM9SF3-204ENST00000475401 LBRQ14739 615 aaKnown RBP10.37□□□□□ -0.75
TM9SF3-204ENST00000475401 RTN1Q16799 776 aa10.37□□□□□ -0.75
TM9SF3-204ENST00000475401 FOXR1Q6PIV2 292 aa10.37□□□□□ -0.75
TM9SF3-204ENST00000475401 SLC16A10Q8TF71 515 aa10.37□□□□□ -0.75
TM9SF3-204ENST00000475401 RUBCNLQ9H714 662 aa10.37□□□□□ -0.75
TM9SF3-204ENST00000475401 ANKIB1Q9P2G1 1089 aa10.37□□□□□ -0.75
TM9SF3-204ENST00000475401 ATP4AP20648 1035 aa10.36□□□□□ -0.75
TM9SF3-204ENST00000475401 ARID4AP29374 1257 aaPredicted RBP10.36□□□□□ -0.75
TM9SF3-204ENST00000475401 TRIM22Q8IYM9 498 aa10.36□□□□□ -0.75
TM9SF3-204ENST00000475401 NUCKS1Q9H1E3 243 aaKnown RBP10.36□□□□□ -0.75
TM9SF3-204ENST00000475401 CRISPLD1Q9H336 500 aa10.36□□□□□ -0.75
TM9SF3-204ENST00000475401 CDC14CA4D256 554 aa10.35□□□□□ -0.75
TM9SF3-204ENST00000475401 PATL2C9JE40 543 aaKnown RBP10.35□□□□□ -0.75
TM9SF3-204ENST00000475401 A0A1W2PNR3 127 aa10.34□□□□□ -0.75
TM9SF3-204ENST00000475401 C16orf46Q6P387 395 aa10.34□□□□□ -0.75
TM9SF3-204ENST00000475401 FIGNL1Q6PIW4 674 aa10.34□□□□□ -0.75
TM9SF3-204ENST00000475401 NLRP8Q86W28 1048 aa10.34□□□□□ -0.75
TM9SF3-204ENST00000475401 NAA30Q147X3 362 aaPredicted RBP10.33□□□□□ -0.76
TM9SF3-204ENST00000475401 SV2AQ7L0J3 742 aa10.33□□□□□ -0.76
TM9SF3-204ENST00000475401 CCER1Q8TC90 406 aaPredicted RBP10.33□□□□□ -0.76
TM9SF3-204ENST00000475401 MYO19Q96H55 970 aa10.33□□□□□ -0.76
TM9SF3-204ENST00000475401 ZIC5Q96T25 663 aa10.33□□□□□ -0.76
TM9SF3-204ENST00000475401 TERTO14746 1132 aaKnown RBP10.32□□□□□ -0.76
TM9SF3-204ENST00000475401 PHLDB3Q6NSJ2 640 aa10.32□□□□□ -0.76
TM9SF3-204ENST00000475401 KCTD17Q8N5Z5 321 aa10.32□□□□□ -0.76
TM9SF3-204ENST00000475401 TRERF1Q96PN7 1200 aa10.32□□□□□ -0.76
TM9SF3-204ENST00000475401 VEGFBP49765 207 aa10.31□□□□□ -0.76
TM9SF3-204ENST00000475401 DGKZQ13574 1117 aa10.31□□□□□ -0.76
TM9SF3-204ENST00000475401 C11orf91Q3C1V1 193 aa10.31□□□□□ -0.76
TM9SF3-204ENST00000475401 LRRC69Q6ZNQ3 347 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms