RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 ZBTB40Q9NUA8 1239 aa17.38■□□□□ 0.37
TRAF4-210ENST00000475329 PRAMEF22A3QJZ6 481 aa17.37■□□□□ 0.37
TRAF4-210ENST00000475329 BCL9O00512 1426 aa17.37■□□□□ 0.37
TRAF4-210ENST00000475329 CCT4P50991 539 aaKnown RBP17.36■□□□□ 0.37
TRAF4-210ENST00000475329 HYPKQ9NX55 129 aa17.36■□□□□ 0.37
TRAF4-210ENST00000475329 PCDHB15Q9Y5E8 787 aa17.36■□□□□ 0.37
TRAF4-210ENST00000475329 AFF2P51816 1311 aa17.36■□□□□ 0.37
TRAF4-210ENST00000475329 ZBTB7BO15156 539 aaPredicted RBP17.35■□□□□ 0.37
TRAF4-210ENST00000475329 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
TRAF4-210ENST00000475329 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
TRAF4-210ENST00000475329 DDX21Q9NR30 783 aaKnown RBP eCLIP17.35■□□□□ 0.37
TRAF4-210ENST00000475329 ARFGEF2Q9Y6D5 1785 aa17.35■□□□□ 0.37
TRAF4-210ENST00000475329 F6X3S4 739 aa17.34■□□□□ 0.37
TRAF4-210ENST00000475329 ATRNO75882 1429 aa17.34■□□□□ 0.37
TRAF4-210ENST00000475329 TJP1Q07157 1748 aa17.34■□□□□ 0.37
TRAF4-210ENST00000475329 SLC4A10Q6U841 1118 aa17.34■□□□□ 0.37
TRAF4-210ENST00000475329 ERBB4Q15303 1308 aa17.33■□□□□ 0.36
TRAF4-210ENST00000475329 ANXA1P04083 346 aa17.33■□□□□ 0.36
TRAF4-210ENST00000475329 PIGBQ92521 554 aa17.33■□□□□ 0.36
TRAF4-210ENST00000475329 RWDD1Q9H446 243 aaPredicted RBP17.33■□□□□ 0.36
TRAF4-210ENST00000475329 AFDNP55196 1824 aaKnown RBP17.33■□□□□ 0.36
TRAF4-210ENST00000475329 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-210ENST00000475329 IGHDP01880 384 aa17.32■□□□□ 0.36
TRAF4-210ENST00000475329 PROSER3Q2NL68 480 aa17.32■□□□□ 0.36
TRAF4-210ENST00000475329 MARCH10Q8NA82 808 aaPredicted RBP17.32■□□□□ 0.36
TRAF4-210ENST00000475329 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
TRAF4-210ENST00000475329 NHSQ6T4R5 1651 aa17.32■□□□□ 0.36
TRAF4-210ENST00000475329 USP16Q9Y5T5 823 aa17.31■□□□□ 0.36
TRAF4-210ENST00000475329 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 ADCY9O60503 1353 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 A0A0G2JS52 829 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 PTCD1O75127 700 aaKnown RBP17.3■□□□□ 0.36
TRAF4-210ENST00000475329 DDX58O95786 925 aaKnown RBP17.3■□□□□ 0.36
TRAF4-210ENST00000475329 MYT1Q01538 1121 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 HDAC1Q13547 482 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-210ENST00000475329 PDIA6Q15084 440 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 DNAAF4Q8WXU2 420 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 SYTL4Q96C24 671 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-210ENST00000475329 ATG3Q9NT62 314 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 TRPC5Q9UL62 973 aaPredicted RBP17.3■□□□□ 0.36
TRAF4-210ENST00000475329 ASAP1Q9ULH1 1129 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 SBF2Q86WG5 1849 aa17.3■□□□□ 0.36
TRAF4-210ENST00000475329 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
TRAF4-210ENST00000475329 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
TRAF4-210ENST00000475329 GJD4Q96KN9 370 aaPredicted RBP17.29■□□□□ 0.36
TRAF4-210ENST00000475329 ZNF831Q5JPB2 1677 aa17.29■□□□□ 0.36
TRAF4-210ENST00000475329 PI4KAP2A4QPH2 592 aa17.28■□□□□ 0.36
TRAF4-210ENST00000475329 PI4KAP1Q8N8J0 262 aa17.28■□□□□ 0.36
TRAF4-210ENST00000475329 BTAF1O14981 1849 aa17.28■□□□□ 0.36
TRAF4-210ENST00000475329 MYL6BP14649 208 aa17.27■□□□□ 0.36
TRAF4-210ENST00000475329 KSR2Q6VAB6 950 aa17.27■□□□□ 0.36
TRAF4-210ENST00000475329 MEIS3Q99687 375 aa17.27■□□□□ 0.36
TRAF4-210ENST00000475329 TEX13AQ9BXU3 409 aaPredicted RBP17.27■□□□□ 0.36
TRAF4-210ENST00000475329 SRCIN1Q9C0H9 1055 aa17.27■□□□□ 0.36
TRAF4-210ENST00000475329 C1orf115Q9H7X2 142 aa17.27■□□□□ 0.36
TRAF4-210ENST00000475329 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
TRAF4-210ENST00000475329 GNAI3P08754 354 aa17.26■□□□□ 0.35
TRAF4-210ENST00000475329 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
TRAF4-210ENST00000475329 MAP3K2Q9Y2U5 619 aa17.26■□□□□ 0.35
TRAF4-210ENST00000475329 RREB1Q92766 1687 aa17.26■□□□□ 0.35
TRAF4-210ENST00000475329 COL5A3P25940 1745 aaPredicted RBP17.25■□□□□ 0.35
TRAF4-210ENST00000475329 LRP10Q7Z4F1 713 aa17.25■□□□□ 0.35
TRAF4-210ENST00000475329 XAGE3Q8WTP9 111 aa17.25■□□□□ 0.35
TRAF4-210ENST00000475329 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
TRAF4-210ENST00000475329 AIMP1Q12904 312 aaKnown RBP17.24■□□□□ 0.35
TRAF4-210ENST00000475329 BEND3Q5T5X7 828 aa17.24■□□□□ 0.35
TRAF4-210ENST00000475329 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
TRAF4-210ENST00000475329 COPS6Q7L5N1 327 aa17.23■□□□□ 0.35
TRAF4-210ENST00000475329 RIC3Q7Z5B4 369 aa17.23■□□□□ 0.35
TRAF4-210ENST00000475329 ANKRD36CQ5JPF3 1778 aa17.23■□□□□ 0.35
TRAF4-210ENST00000475329 NBPF26B4DH59 902 aa17.22■□□□□ 0.35
TRAF4-210ENST00000475329 STARD3NLO95772 234 aa17.22■□□□□ 0.35
TRAF4-210ENST00000475329 GNAI2P04899 355 aa17.22■□□□□ 0.35
TRAF4-210ENST00000475329 PIP4K2AP48426 406 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-210ENST00000475329 NBPF14Q5TI25 921 aa17.22■□□□□ 0.35
TRAF4-210ENST00000475329 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-210ENST00000475329 NBPF10Q6P3W6 841 aaKnown RBP17.22■□□□□ 0.35
TRAF4-210ENST00000475329 DNAJC10Q8IXB1 793 aa17.22■□□□□ 0.35
TRAF4-210ENST00000475329 RPAP2Q8IXW5 612 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-210ENST00000475329 NBPF15Q8N660 670 aa17.22■□□□□ 0.35
TRAF4-210ENST00000475329 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
TRAF4-210ENST00000475329 RGS17Q9UGC6 210 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-210ENST00000475329 IBTKQ9P2D0 1353 aaPredicted RBP17.22■□□□□ 0.35
TRAF4-210ENST00000475329 ONECUT3O60422 494 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-210ENST00000475329 A1BGP04217 495 aa17.21■□□□□ 0.35
TRAF4-210ENST00000475329 UBTFL1P0CB47 393 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-210ENST00000475329 CEP85Q6P2H3 762 aa17.21■□□□□ 0.35
TRAF4-210ENST00000475329 SMC5Q8IY18 1101 aa17.21■□□□□ 0.35
TRAF4-210ENST00000475329 LINS1Q8NG48 757 aa17.21■□□□□ 0.35
TRAF4-210ENST00000475329 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-210ENST00000475329 QTRT2Q9H974 415 aaKnown RBP17.21■□□□□ 0.35
TRAF4-210ENST00000475329 PALLDQ8WX93 1383 aa17.2■□□□□ 0.34
TRAF4-210ENST00000475329 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
TRAF4-210ENST00000475329 ANKRD13DQ6ZTN6 518 aa17.2■□□□□ 0.34
TRAF4-210ENST00000475329 SIRT2Q8IXJ6 389 aa17.2■□□□□ 0.34
TRAF4-210ENST00000475329 USP44Q9H0E7 712 aa17.2■□□□□ 0.34
TRAF4-210ENST00000475329 LY75O60449 1722 aa17.2■□□□□ 0.34
TRAF4-210ENST00000475329 HMMRO75330 724 aa17.19■□□□□ 0.34
TRAF4-210ENST00000475329 PLBD2Q8NHP8 589 aa17.19■□□□□ 0.34
TRAF4-210ENST00000475329 GCC1Q96CN9 775 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms