RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 TMEM63CQ9P1W3 806 aa13.36□□□□□ -0.27
C9orf3-214ENST00000473778 RGPD2P0DJD1 1756 aa13.36□□□□□ -0.27
C9orf3-214ENST00000473778 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
C9orf3-214ENST00000473778 LGR6Q9HBX8 967 aa13.36□□□□□ -0.27
C9orf3-214ENST00000473778 SOS1Q07889 1333 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-214ENST00000473778 KCNQ3O43525 872 aa13.35□□□□□ -0.27
C9orf3-214ENST00000473778 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-214ENST00000473778 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
C9orf3-214ENST00000473778 SSH3Q8TE77 659 aa13.35□□□□□ -0.27
C9orf3-214ENST00000473778 RBM33Q96EV2 1170 aaKnown RBP13.35□□□□□ -0.27
C9orf3-214ENST00000473778 PXDNLA1KZ92 1463 aa13.35□□□□□ -0.27
C9orf3-214ENST00000473778 CUL4AQ13619 759 aa13.35□□□□□ -0.27
C9orf3-214ENST00000473778 TRIM44Q96DX7 344 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-214ENST00000473778 TCHHQ07283 1943 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 CEMIPQ8WUJ3 1361 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 ANXA1P04083 346 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 UBTFL1P0CB47 393 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-214ENST00000473778 PPP1R42Q7Z4L9 355 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 BRD1O95696 1058 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 EIF2S2P20042 333 aaKnown RBP13.34□□□□□ -0.27
C9orf3-214ENST00000473778 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 NBPF6Q5VWK0 638 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 PI4K2BQ8TCG2 481 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 NBPF4Q96M43 638 aa13.34□□□□□ -0.27
C9orf3-214ENST00000473778 MED1Q15648 1581 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-214ENST00000473778 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
C9orf3-214ENST00000473778 POLA2Q14181 598 aa13.32□□□□□ -0.28
C9orf3-214ENST00000473778 CHPF2Q9P2E5 772 aa13.32□□□□□ -0.28
C9orf3-214ENST00000473778 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
C9orf3-214ENST00000473778 FER1L4A9Z1Z3 1794 aa13.32□□□□□ -0.28
C9orf3-214ENST00000473778 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
C9orf3-214ENST00000473778 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
C9orf3-214ENST00000473778 IL17RAQ96F46 866 aa13.32□□□□□ -0.28
C9orf3-214ENST00000473778 SYCE3A1L190 88 aa13.31□□□□□ -0.28
C9orf3-214ENST00000473778 SURF6O75683 361 aaKnown RBP13.31□□□□□ -0.28
C9orf3-214ENST00000473778 NFAT5O94916 1531 aa13.31□□□□□ -0.28
C9orf3-214ENST00000473778 ANAPC15P60006 121 aa13.31□□□□□ -0.28
C9orf3-214ENST00000473778 FOXD4L6Q3SYB3 417 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-214ENST00000473778 FOXD4L3Q6VB84 417 aaPredicted RBP13.31□□□□□ -0.28
C9orf3-214ENST00000473778 RHPN1Q8TCX5 695 aa13.31□□□□□ -0.28
C9orf3-214ENST00000473778 PI4KAP2A4QPH2 592 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 SRGAP3O43295 1099 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 HSPA4P34932 840 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 BEND3Q5T5X7 828 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 PI4KAP1Q8N8J0 262 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 SRCIN1Q9C0H9 1055 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 THEMISQ8N1K5 641 aaPredicted RBP13.3□□□□□ -0.28
C9orf3-214ENST00000473778 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
C9orf3-214ENST00000473778 LARP6Q9BRS8 491 aaKnown RBP13.3□□□□□ -0.28
C9orf3-214ENST00000473778 GDPD2Q9HCC8 539 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 BABAM1Q9NWV8 329 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 ADCY9O60503 1353 aa13.3□□□□□ -0.28
C9orf3-214ENST00000473778 CRYBG1Q9Y4K1 1723 aa13.29□□□□□ -0.28
C9orf3-214ENST00000473778 DTNBO60941 627 aa13.29□□□□□ -0.28
C9orf3-214ENST00000473778 RASEFQ8IZ41 740 aa13.29□□□□□ -0.28
C9orf3-214ENST00000473778 AOX1Q06278 1338 aa13.29□□□□□ -0.28
C9orf3-214ENST00000473778 INTS4Q96HW7 963 aaKnown RBP13.29□□□□□ -0.28
C9orf3-214ENST00000473778 PDLIM2Q96JY6 352 aa13.29□□□□□ -0.28
C9orf3-214ENST00000473778 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
C9orf3-214ENST00000473778 U3KPZ7 1027 aaPredicted RBP13.29□□□□□ -0.28
C9orf3-214ENST00000473778 SGSM2O43147 1006 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 GADD45BO75293 160 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-214ENST00000473778 MCCP23508 829 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 MCM2P49736 904 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 IP6K1Q92551 441 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 PXDNQ92626 1479 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 RPAP1Q9BWH6 1393 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-214ENST00000473778 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 LRSAM1Q6UWE0 723 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 PHF8Q9UPP1 1060 aa13.28□□□□□ -0.28
C9orf3-214ENST00000473778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.28□□□□□ -0.28
C9orf3-214ENST00000473778 RAD50Q92878 1312 aa13.27□□□□□ -0.28
C9orf3-214ENST00000473778 MPRIPQ6WCQ1 1025 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 DNAAF4Q8WXU2 420 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 LSG1Q9H089 658 aaKnown RBP13.27□□□□□ -0.29
C9orf3-214ENST00000473778 SNX14Q9Y5W7 946 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 LMO7Q8WWI1 1683 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 ZBTB7CA1YPR0 619 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 CPA1P15085 419 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 TTC14Q96N46 770 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 SPG7Q9UQ90 795 aa13.27□□□□□ -0.29
C9orf3-214ENST00000473778 RAB11FIP3O75154 756 aa13.26□□□□□ -0.29
C9orf3-214ENST00000473778 CWC27Q6UX04 472 aaKnown RBP13.26□□□□□ -0.29
C9orf3-214ENST00000473778 KIF1BPQ96EK5 621 aa13.26□□□□□ -0.29
C9orf3-214ENST00000473778 RNF214Q8ND24 703 aa13.25□□□□□ -0.29
C9orf3-214ENST00000473778 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
C9orf3-214ENST00000473778 COL9A3Q14050 684 aaPredicted RBP13.25□□□□□ -0.29
C9orf3-214ENST00000473778 LARGE1O95461 756 aa13.24□□□□□ -0.29
C9orf3-214ENST00000473778 RUFY3Q7L099 469 aa13.24□□□□□ -0.29
C9orf3-214ENST00000473778 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
C9orf3-214ENST00000473778 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
C9orf3-214ENST00000473778 AK2P54819 239 aa13.24□□□□□ -0.29
C9orf3-214ENST00000473778 CWF19L2Q2TBE0 894 aaKnown RBP13.24□□□□□ -0.29
C9orf3-214ENST00000473778 ANP32BQ92688 251 aaKnown RBP13.24□□□□□ -0.29
C9orf3-214ENST00000473778 PTH1RQ03431 593 aa13.23□□□□□ -0.29
C9orf3-214ENST00000473778 ZNF530Q6P9A1 599 aaPredicted RBP13.23□□□□□ -0.29
C9orf3-214ENST00000473778 USP48Q86UV5 1035 aa13.23□□□□□ -0.29
C9orf3-214ENST00000473778 XPCQ01831 940 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 149.1 ms