RNA–Protein interactions for RNA: ENST00000473270.1

APTX-218, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 645 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-218ENST00000473270 KCNA3P22001 575 aa26.17■■□□□ 1.78
APTX-218ENST00000473270 NARFQ9UHQ1 456 aa26.17■■□□□ 1.78
APTX-218ENST00000473270 TM4SF1P30408 202 aa26.16■■□□□ 1.78
APTX-218ENST00000473270 COL15A1P39059 1388 aa26.16■■□□□ 1.78
APTX-218ENST00000473270 TJP1Q07157 1748 aa26.16■■□□□ 1.78
APTX-218ENST00000473270 KIAA1551Q9HCM1 1747 aa26.15■■□□□ 1.78
APTX-218ENST00000473270 A0A087WZG4 1122 aa26.15■■□□□ 1.78
APTX-218ENST00000473270 CHRNA5P30532 468 aa26.15■■□□□ 1.78
APTX-218ENST00000473270 GAS2L2Q8NHY3 880 aa26.15■■□□□ 1.78
APTX-218ENST00000473270 RNF181Q9P0P0 153 aa26.15■■□□□ 1.78
APTX-218ENST00000473270 CANXP27824 592 aaKnown RBP26.14■■□□□ 1.78
APTX-218ENST00000473270 TEX13AQ9BXU3 409 aaPredicted RBP26.14■■□□□ 1.78
APTX-218ENST00000473270 DDX10Q13206 875 aaKnown RBP26.13■■□□□ 1.77
APTX-218ENST00000473270 CFAP53Q96M91 514 aa26.13■■□□□ 1.77
APTX-218ENST00000473270 ZBTB1Q9Y2K1 713 aa26.13■■□□□ 1.77
APTX-218ENST00000473270 MRC1P22897 1456 aa26.12■■□□□ 1.77
APTX-218ENST00000473270 GNAT3A8MTJ3 354 aa26.12■■□□□ 1.77
APTX-218ENST00000473270 PER1O15534 1290 aaPredicted RBP26.12■■□□□ 1.77
APTX-218ENST00000473270 NMRK2Q9NPI5 230 aa26.12■■□□□ 1.77
APTX-218ENST00000473270 NFIXQ14938 502 aa26.11■■□□□ 1.77
APTX-218ENST00000473270 SERPINB2P05120 415 aa26.1■■□□□ 1.77
APTX-218ENST00000473270 ZNF330Q9Y3S2 320 aaPredicted RBP26.1■■□□□ 1.77
APTX-218ENST00000473270 H0YIN7 160 aa26.09■■□□□ 1.77
APTX-218ENST00000473270 NPHP1O15259 732 aa26.09■■□□□ 1.77
APTX-218ENST00000473270 IFFO2Q5TF58 517 aa26.09■■□□□ 1.77
APTX-218ENST00000473270 ARFGEF1Q9Y6D6 1849 aa26.09■■□□□ 1.77
APTX-218ENST00000473270 BICDL1Q6ZP65 573 aa26.08■■□□□ 1.77
APTX-218ENST00000473270 RBM46Q8TBY0 533 aaKnown RBP26.08■■□□□ 1.77
APTX-218ENST00000473270 BRCA1P38398 1863 aaKnown RBP26.07■■□□□ 1.76
APTX-218ENST00000473270 TTLL6Q8N841 843 aa26.07■■□□□ 1.76
APTX-218ENST00000473270 NUDCQ9Y266 331 aa26.07■■□□□ 1.76
APTX-218ENST00000473270 NPC1L1Q9UHC9 1359 aa26.07■■□□□ 1.76
APTX-218ENST00000473270 KCPQ6ZWJ8 1503 aa26.06■■□□□ 1.76
APTX-218ENST00000473270 ZNF790Q6PG37 636 aa26.06■■□□□ 1.76
APTX-218ENST00000473270 C2CD5Q86YS7 1000 aa26.06■■□□□ 1.76
APTX-218ENST00000473270 FMNL2Q96PY5 1086 aa26.05■■□□□ 1.76
APTX-218ENST00000473270 PDZRN3Q9UPQ7 1066 aa26.05■■□□□ 1.76
APTX-218ENST00000473270 FSTL1Q12841 308 aa26.04■■□□□ 1.76
APTX-218ENST00000473270 LMNB1P20700 586 aa26.03■■□□□ 1.76
APTX-218ENST00000473270 RRAGCQ9HB90 399 aa26.03■■□□□ 1.76
APTX-218ENST00000473270 ZC3H4Q9UPT8 1303 aaKnown RBP26.03■■□□□ 1.76
APTX-218ENST00000473270 PDE6BP35913 854 aa26.02■■□□□ 1.76
APTX-218ENST00000473270 EIF5P55010 431 aaKnown RBP26.02■■□□□ 1.76
APTX-218ENST00000473270 RTF1Q92541 710 aaKnown RBP26.02■■□□□ 1.76
APTX-218ENST00000473270 ZNF496Q96IT1 587 aaPredicted RBP26.02■■□□□ 1.76
APTX-218ENST00000473270 HEG1Q9ULI3 1381 aa26.02■■□□□ 1.76
APTX-218ENST00000473270 VIRMAQ69YN4 1812 aaKnown RBP26■■□□□ 1.75
APTX-218ENST00000473270 BTBD11A6QL63 1104 aa26■■□□□ 1.75
APTX-218ENST00000473270 IL17REQ8NFR9 667 aa26■■□□□ 1.75
APTX-218ENST00000473270 ZNF622Q969S3 477 aaKnown RBP eCLIP26■■□□□ 1.75
APTX-218ENST00000473270 ADAMTS7Q9UKP4 1686 aa25.99■■□□□ 1.75
APTX-218ENST00000473270 IL6STP40189 918 aaPredicted RBP25.99■■□□□ 1.75
APTX-218ENST00000473270 SETDB2Q96T68 719 aa25.99■■□□□ 1.75
APTX-218ENST00000473270 BCL2L12Q9HB09 334 aa25.99■■□□□ 1.75
APTX-218ENST00000473270 PRKAR2BP31323 418 aa25.98■■□□□ 1.75
APTX-218ENST00000473270 RASSF7Q02833 373 aa25.98■■□□□ 1.75
APTX-218ENST00000473270 TBC1D2BQ9UPU7 963 aa25.98■■□□□ 1.75
APTX-218ENST00000473270 CARMIL3Q8ND23 1372 aa25.97■■□□□ 1.75
APTX-218ENST00000473270 SMC1BQ8NDV3 1235 aa25.97■■□□□ 1.75
APTX-218ENST00000473270 BRIP1Q9BX63 1249 aa25.97■■□□□ 1.75
APTX-218ENST00000473270 NEFMP07197 916 aa25.96■■□□□ 1.75
APTX-218ENST00000473270 ST5P78524 1137 aa25.96■■□□□ 1.75
APTX-218ENST00000473270 TBC1D9BQ66K14 1250 aa25.96■■□□□ 1.75
APTX-218ENST00000473270 DPY19L2Q6NUT2 758 aa25.96■■□□□ 1.75
APTX-218ENST00000473270 UBR2Q8IWV8 1755 aa25.95■■□□□ 1.75
APTX-218ENST00000473270 U2AF1L5P0DN76 240 aaPredicted RBP25.95■■□□□ 1.74
APTX-218ENST00000473270 U2AF1Q01081 240 aaKnown RBP eCLIP25.95■■□□□ 1.74
APTX-218ENST00000473270 COL3A1P02461 1466 aaPredicted RBP25.94■■□□□ 1.74
APTX-218ENST00000473270 AFDNP55196 1824 aaKnown RBP25.94■■□□□ 1.74
APTX-218ENST00000473270 VEGFAP15692 232 aaPredicted RBP25.94■■□□□ 1.74
APTX-218ENST00000473270 CNBD1Q8NA66 436 aa25.94■■□□□ 1.74
APTX-218ENST00000473270 GLTPD2A6NH11 291 aa25.93■■□□□ 1.74
APTX-218ENST00000473270 ZNF652Q9Y2D9 606 aa25.93■■□□□ 1.74
APTX-218ENST00000473270 A1BGP04217 495 aa25.92■■□□□ 1.74
APTX-218ENST00000473270 DZIP3Q86Y13 1208 aaKnown RBP25.92■■□□□ 1.74
APTX-218ENST00000473270 ZNF219Q9P2Y4 722 aaPredicted RBP25.92■■□□□ 1.74
APTX-218ENST00000473270 TNRC6CQ9HCJ0 1690 aaKnown RBP25.92■■□□□ 1.74
APTX-218ENST00000473270 NRXN2Q9P2S2 1712 aa25.91■■□□□ 1.74
APTX-218ENST00000473270 RSPH6AQ9H0K4 717 aa25.91■■□□□ 1.74
APTX-218ENST00000473270 SOGA3Q5TF21 947 aa25.9■■□□□ 1.74
APTX-218ENST00000473270 PRR5LQ6MZQ0 368 aa25.9■■□□□ 1.74
APTX-218ENST00000473270 DNAJC5GQ8N7S2 189 aa25.9■■□□□ 1.74
APTX-218ENST00000473270 CNKSR1Q969H4 720 aa25.9■■□□□ 1.74
APTX-218ENST00000473270 PHACTR3Q96KR7 559 aa25.9■■□□□ 1.74
APTX-218ENST00000473270 CEMIPQ8WUJ3 1361 aa25.9■■□□□ 1.74
APTX-218ENST00000473270 C21orf2O43822 256 aa25.89■■□□□ 1.74
APTX-218ENST00000473270 SNRPA1P09661 255 aaKnown RBP25.89■■□□□ 1.74
APTX-218ENST00000473270 SBF1O95248 1867 aa25.87■■□□□ 1.73
APTX-218ENST00000473270 ERFEQ4G0M1 354 aa25.87■■□□□ 1.73
APTX-218ENST00000473270 NBPF5PQ86XG9 351 aaPredicted RBP25.87■■□□□ 1.73
APTX-218ENST00000473270 KLRG1Q96E93 195 aa25.87■■□□□ 1.73
APTX-218ENST00000473270 DLEC1Q9Y238 1755 aa25.87■■□□□ 1.73
APTX-218ENST00000473270 CAMTA2O94983 1202 aa25.86■■□□□ 1.73
APTX-218ENST00000473270 CLEC4GQ6UXB4 293 aa25.86■■□□□ 1.73
APTX-218ENST00000473270 CCDC24Q8N4L8 307 aa25.86■■□□□ 1.73
APTX-218ENST00000473270 NFKBIEO00221 500 aa25.85■■□□□ 1.73
APTX-218ENST00000473270 STYK1Q6J9G0 422 aa25.85■■□□□ 1.73
APTX-218ENST00000473270 MCM10Q7L590 875 aa25.85■■□□□ 1.73
APTX-218ENST00000473270 TAOK3Q9H2K8 898 aa25.85■■□□□ 1.73
APTX-218ENST00000473270 WDR90Q96KV7 1748 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms