RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 ADCY9O60503 1353 aa22.82■■□□□ 1.24
GCFC2-208ENST00000472230 USP44Q9H0E7 712 aa22.82■■□□□ 1.24
GCFC2-208ENST00000472230 MSH5O43196 834 aa22.82■■□□□ 1.24
GCFC2-208ENST00000472230 BEND3Q5T5X7 828 aa22.82■■□□□ 1.24
GCFC2-208ENST00000472230 KSR2Q6VAB6 950 aa22.82■■□□□ 1.24
GCFC2-208ENST00000472230 MAP3K2Q9Y2U5 619 aa22.82■■□□□ 1.24
GCFC2-208ENST00000472230 ERICH6Q7L0X2 663 aa22.81■■□□□ 1.24
GCFC2-208ENST00000472230 LRRFIP2Q9Y608 721 aaKnown RBP22.8■■□□□ 1.24
GCFC2-208ENST00000472230 LAMB4A4D0S4 1761 aa22.8■■□□□ 1.24
GCFC2-208ENST00000472230 PLCH1Q4KWH8 1693 aa22.79■■□□□ 1.24
GCFC2-208ENST00000472230 AIMP1Q12904 312 aaKnown RBP22.79■■□□□ 1.24
GCFC2-208ENST00000472230 MYL6BP14649 208 aa22.79■■□□□ 1.24
GCFC2-208ENST00000472230 ATP8B2P98198 1209 aa22.79■■□□□ 1.24
GCFC2-208ENST00000472230 UPF2Q9HAU5 1272 aaKnown RBP22.79■■□□□ 1.24
GCFC2-208ENST00000472230 ADAMTS2O95450 1211 aa22.78■■□□□ 1.24
GCFC2-208ENST00000472230 PDIA6Q15084 440 aa22.78■■□□□ 1.24
GCFC2-208ENST00000472230 DDRGK1Q96HY6 314 aa22.78■■□□□ 1.24
GCFC2-208ENST00000472230 ALDH1L1O75891 902 aa22.78■■□□□ 1.24
GCFC2-208ENST00000472230 USP16Q9Y5T5 823 aa22.78■■□□□ 1.24
GCFC2-208ENST00000472230 APBB1O00213 710 aa22.77■■□□□ 1.23
GCFC2-208ENST00000472230 BCL11AQ9H165 835 aa22.77■■□□□ 1.23
GCFC2-208ENST00000472230 PAPPAQ13219 1627 aa22.76■■□□□ 1.23
GCFC2-208ENST00000472230 UBR2Q8IWV8 1755 aa22.76■■□□□ 1.23
GCFC2-208ENST00000472230 RIC3Q7Z5B4 369 aa22.76■■□□□ 1.23
GCFC2-208ENST00000472230 DISP2A7MBM2 1401 aa22.75■■□□□ 1.23
GCFC2-208ENST00000472230 NUTM2BA6NNL0 878 aaPredicted RBP22.75■■□□□ 1.23
GCFC2-208ENST00000472230 NUTM2EB1AL46 878 aaPredicted RBP22.75■■□□□ 1.23
GCFC2-208ENST00000472230 BMP2KLQ5H9B9 411 aa22.75■■□□□ 1.23
GCFC2-208ENST00000472230 NUTM2AQ8IVF1 878 aaPredicted RBP22.75■■□□□ 1.23
GCFC2-208ENST00000472230 TMOD3Q9NYL9 352 aa22.75■■□□□ 1.23
GCFC2-208ENST00000472230 HDAC5Q9UQL6 1122 aa22.75■■□□□ 1.23
GCFC2-208ENST00000472230 TOGARAM1Q9Y4F4 1720 aa22.75■■□□□ 1.23
GCFC2-208ENST00000472230 WNK3Q9BYP7 1800 aa22.74■■□□□ 1.23
GCFC2-208ENST00000472230 UBAP1LF5GYI3 381 aa22.74■■□□□ 1.23
GCFC2-208ENST00000472230 SEC24BO95487 1268 aa22.74■■□□□ 1.23
GCFC2-208ENST00000472230 C9orf78Q9NZ63 289 aaPredicted RBP22.74■■□□□ 1.23
GCFC2-208ENST00000472230 NOP58Q9Y2X3 529 aaKnown RBP22.74■■□□□ 1.23
GCFC2-208ENST00000472230 XAGE3Q8WTP9 111 aa22.74■■□□□ 1.23
GCFC2-208ENST00000472230 PNMA6EA0A0J9YXQ4 647 aa22.73■■□□□ 1.23
GCFC2-208ENST00000472230 NEXNQ0ZGT2 675 aa22.73■■□□□ 1.23
GCFC2-208ENST00000472230 COPS6Q7L5N1 327 aa22.73■■□□□ 1.23
GCFC2-208ENST00000472230 LINS1Q8NG48 757 aa22.73■■□□□ 1.23
GCFC2-208ENST00000472230 GLI3P10071 1580 aa22.73■■□□□ 1.23
GCFC2-208ENST00000472230 EXOC5O00471 708 aa22.72■■□□□ 1.23
GCFC2-208ENST00000472230 NBPF7P0C2Y1 421 aaPredicted RBP22.72■■□□□ 1.23
GCFC2-208ENST00000472230 NRAPQ86VF7 1730 aa22.72■■□□□ 1.23
GCFC2-208ENST00000472230 KCPQ6ZWJ8 1503 aa22.72■■□□□ 1.23
GCFC2-208ENST00000472230 SMARCA5O60264 1052 aaPredicted RBP22.71■■□□□ 1.23
GCFC2-208ENST00000472230 PLEKHM2Q8IWE5 1019 aa22.71■■□□□ 1.23
GCFC2-208ENST00000472230 EXOC6BQ9Y2D4 811 aa22.71■■□□□ 1.23
GCFC2-208ENST00000472230 ERBB4Q15303 1308 aa22.71■■□□□ 1.23
GCFC2-208ENST00000472230 PTCD1O75127 700 aaKnown RBP22.7■■□□□ 1.22
GCFC2-208ENST00000472230 CWF19L2Q2TBE0 894 aaKnown RBP22.7■■□□□ 1.22
GCFC2-208ENST00000472230 PIP4K2AP48426 406 aaPredicted RBP22.69■■□□□ 1.22
GCFC2-208ENST00000472230 ANKRD13DQ6ZTN6 518 aa22.69■■□□□ 1.22
GCFC2-208ENST00000472230 PPP1R42Q7Z4L9 355 aa22.69■■□□□ 1.22
GCFC2-208ENST00000472230 C16orf71Q8IYS4 520 aaPredicted RBP22.69■■□□□ 1.22
GCFC2-208ENST00000472230 LRRCC1Q9C099 1032 aa22.69■■□□□ 1.22
GCFC2-208ENST00000472230 SSH3Q8TE77 659 aa22.69■■□□□ 1.22
GCFC2-208ENST00000472230 CDCA7Q9BWT1 371 aaPredicted RBP22.69■■□□□ 1.22
GCFC2-208ENST00000472230 TNS2Q63HR2 1409 aa22.69■■□□□ 1.22
GCFC2-208ENST00000472230 ITGB4P16144 1822 aa22.68■■□□□ 1.22
GCFC2-208ENST00000472230 METTL22Q9BUU2 404 aaPredicted RBP22.68■■□□□ 1.22
GCFC2-208ENST00000472230 NWD2Q9ULI1 1742 aa22.68■■□□□ 1.22
GCFC2-208ENST00000472230 THRAP3Q9Y2W1 955 aaKnown RBP22.68■■□□□ 1.22
GCFC2-208ENST00000472230 SRGAP3O43295 1099 aa22.67■■□□□ 1.22
GCFC2-208ENST00000472230 IBTKQ9P2D0 1353 aaPredicted RBP22.67■■□□□ 1.22
GCFC2-208ENST00000472230 GRM8O00222 908 aa22.66■■□□□ 1.22
GCFC2-208ENST00000472230 LRP10Q7Z4F1 713 aa22.66■■□□□ 1.22
GCFC2-208ENST00000472230 MYD88Q99836 296 aa22.66■■□□□ 1.22
GCFC2-208ENST00000472230 SPATA31A1Q5TZJ5 1347 aa22.66■■□□□ 1.22
GCFC2-208ENST00000472230 MFAP1P55081 439 aaKnown RBP22.66■■□□□ 1.22
GCFC2-208ENST00000472230 POLA2Q14181 598 aa22.66■■□□□ 1.22
GCFC2-208ENST00000472230 DAXXQ9UER7 740 aaPredicted RBP22.66■■□□□ 1.22
GCFC2-208ENST00000472230 LRP6O75581 1613 aa22.65■■□□□ 1.22
GCFC2-208ENST00000472230 TTC22Q5TAA0 569 aa22.65■■□□□ 1.22
GCFC2-208ENST00000472230 ARFGEF2Q9Y6D5 1785 aa22.65■■□□□ 1.22
GCFC2-208ENST00000472230 PIGBQ92521 554 aa22.65■■□□□ 1.22
GCFC2-208ENST00000472230 CCDC9Q9Y3X0 531 aaKnown RBP22.65■■□□□ 1.22
GCFC2-208ENST00000472230 RAB11FIP3O75154 756 aa22.64■■□□□ 1.22
GCFC2-208ENST00000472230 AFDNP55196 1824 aaKnown RBP22.64■■□□□ 1.21
GCFC2-208ENST00000472230 SURF6O75683 361 aaKnown RBP22.64■■□□□ 1.21
GCFC2-208ENST00000472230 IGKV5-2P06315 115 aa22.64■■□□□ 1.21
GCFC2-208ENST00000472230 OTUD7AQ8TE49 926 aaPredicted RBP22.64■■□□□ 1.21
GCFC2-208ENST00000472230 NEURL1BA8MQ27 555 aa22.63■■□□□ 1.21
GCFC2-208ENST00000472230 PLBD2Q8NHP8 589 aa22.63■■□□□ 1.21
GCFC2-208ENST00000472230 UTYO14607 1347 aa22.63■■□□□ 1.21
GCFC2-208ENST00000472230 HSP90AB4PQ58FF6 505 aa22.62■■□□□ 1.21
GCFC2-208ENST00000472230 TBC1D32Q96NH3 1257 aa22.62■■□□□ 1.21
GCFC2-208ENST00000472230 TEX13AQ9BXU3 409 aaPredicted RBP22.62■■□□□ 1.21
GCFC2-208ENST00000472230 NBPF26B4DH59 902 aa22.62■■□□□ 1.21
GCFC2-208ENST00000472230 GSPT1P15170 499 aaKnown RBP22.62■■□□□ 1.21
GCFC2-208ENST00000472230 DDB1Q16531 1140 aa22.62■■□□□ 1.21
GCFC2-208ENST00000472230 NBPF14Q5TI25 921 aa22.62■■□□□ 1.21
GCFC2-208ENST00000472230 NBPF10Q6P3W6 841 aaKnown RBP22.62■■□□□ 1.21
GCFC2-208ENST00000472230 NBPF15Q8N660 670 aa22.62■■□□□ 1.21
GCFC2-208ENST00000472230 ASAP1Q9ULH1 1129 aa22.62■■□□□ 1.21
GCFC2-208ENST00000472230 CDC45O75419 566 aa22.61■■□□□ 1.21
GCFC2-208ENST00000472230 A1BGP04217 495 aa22.61■■□□□ 1.21
GCFC2-208ENST00000472230 MTX1Q13505 466 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms