RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 USP17L5A8MUK1 530 aa7.71□□□□□ -1.18
PRPF40A-207ENST00000471701 FGFR3P22607 806 aa7.71□□□□□ -1.18
PRPF40A-207ENST00000471701 ATP1A2P50993 1020 aa7.71□□□□□ -1.18
PRPF40A-207ENST00000471701 UBAP2LQ14157 1087 aaKnown RBP7.71□□□□□ -1.18
PRPF40A-207ENST00000471701 A0A1W2PNR3 127 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 POM121CA8CG34 1229 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 ATXN7O15265 892 aaPredicted RBP7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 CTBSQ01459 385 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 BICDL1Q6ZP65 573 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 GOLGA6L1Q8N7Z2 621 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 EDARADDQ8WWZ3 215 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 NEUROD4Q9HD90 331 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 ZDHHC3Q9NYG2 299 aa7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 DNMT3AQ9Y6K1 912 aaPredicted RBP7.7□□□□□ -1.18
PRPF40A-207ENST00000471701 ZNF358Q9NW07 568 aa7.69□□□□□ -1.18
PRPF40A-207ENST00000471701 IQSEC3Q9UPP2 1182 aaPredicted RBP7.69□□□□□ -1.18
PRPF40A-207ENST00000471701 RBM19Q9Y4C8 960 aaKnown RBP7.69□□□□□ -1.18
PRPF40A-207ENST00000471701 RRAGCQ9HB90 399 aa7.68□□□□□ -1.18
PRPF40A-207ENST00000471701 NDFIP2Q9NV92 336 aa7.68□□□□□ -1.18
PRPF40A-207ENST00000471701 SCHIP1Q9P0W5 487 aaPredicted RBP7.68□□□□□ -1.18
PRPF40A-207ENST00000471701 PARP3Q9Y6F1 533 aa7.68□□□□□ -1.18
PRPF40A-207ENST00000471701 C2CD2LO14523 706 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 KHNYNO15037 678 aaKnown RBP7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 ATP9BO43861 1147 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 ATP4AP20648 1035 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 AMPD1P23109 780 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 NOS2P35228 1153 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 FOXK2Q01167 660 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 CCDC102BQ68D86 513 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 PLEKHM2Q8IWE5 1019 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 L3MBTL2Q969R5 705 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 ZIC5Q96T25 663 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 ZNF232Q9UNY5 417 aa7.67□□□□□ -1.18
PRPF40A-207ENST00000471701 USP17L3A6NCW0 530 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 USP17L4A6NCW7 530 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 ZBTB7BO15156 539 aaPredicted RBP7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 IGHA1P01876 353 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 MAPTP10636 758 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 TNP2Q05952 138 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 TEAD4Q15561 434 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 GPAT2Q6NUI2 795 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 USP17L2Q6R6M4 530 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 USP17L1Q7RTZ2 530 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 TNS4Q8IZW8 715 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 TPCN2Q8NHX9 752 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 ADAMTS19Q8TE59 1207 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 DNAAF2Q9NVR5 837 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 MKRN1Q9UHC7 482 aaKnown RBP7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 GGA1Q9UJY5 639 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 MKL2Q9ULH7 1088 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 CHMP3Q9Y3E7 222 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 USP3Q9Y6I4 520 aa7.66□□□□□ -1.18
PRPF40A-207ENST00000471701 DCDC2BA2VCK2 349 aa7.65□□□□□ -1.18
PRPF40A-207ENST00000471701 PALM3A6NDB9 673 aaPredicted RBP7.65□□□□□ -1.18
PRPF40A-207ENST00000471701 ZNF295-AS1Q8N0V1 137 aa7.65□□□□□ -1.18
PRPF40A-207ENST00000471701 LARGE2Q8N3Y3 721 aa7.65□□□□□ -1.18
PRPF40A-207ENST00000471701 OGFOD1Q8N543 542 aa7.65□□□□□ -1.18
PRPF40A-207ENST00000471701 CLUAP1Q96AJ1 413 aa7.65□□□□□ -1.18
PRPF40A-207ENST00000471701 PRR12Q9ULL5 1215 aa7.65□□□□□ -1.18
PRPF40A-207ENST00000471701 SERTM1A2A2V5 107 aa7.64□□□□□ -1.19
PRPF40A-207ENST00000471701 SHISA8B8ZZ34 492 aa7.64□□□□□ -1.19
PRPF40A-207ENST00000471701 ARAFP10398 606 aa7.64□□□□□ -1.19
PRPF40A-207ENST00000471701 C1orf229Q6ZS94 237 aaPredicted RBP7.64□□□□□ -1.19
PRPF40A-207ENST00000471701 PROSER2Q86WR7 435 aaPredicted RBP7.64□□□□□ -1.19
PRPF40A-207ENST00000471701 SLC9A9Q8IVB4 645 aa7.64□□□□□ -1.19
PRPF40A-207ENST00000471701 NEURL1BA8MQ27 555 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 PIK3R2O00459 728 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 TXLNAP40222 546 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 CLDN10P78369 228 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 TBCELQ5QJ74 424 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 FAM182BQ5T319 152 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 DCAF5Q96JK2 942 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 MARK1Q9P0L2 795 aa7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 TFIP11Q9UBB9 837 aaKnown RBP7.63□□□□□ -1.19
PRPF40A-207ENST00000471701 CD33P20138 364 aa7.62□□□□□ -1.19
PRPF40A-207ENST00000471701 SNRPNP63162 240 aaKnown RBP7.62□□□□□ -1.19
PRPF40A-207ENST00000471701 SLCO4C1Q6ZQN7 724 aa7.62□□□□□ -1.19
PRPF40A-207ENST00000471701 ZDHHC1Q8WTX9 485 aa7.62□□□□□ -1.19
PRPF40A-207ENST00000471701 BTBD6Q96KE9 485 aa7.62□□□□□ -1.19
PRPF40A-207ENST00000471701 UCN2Q96RP3 112 aa7.62□□□□□ -1.19
PRPF40A-207ENST00000471701 M0R2N6 131 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 FAM157BP0CG42 384 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 RASA1P20936 1047 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 ADH6P28332 368 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 EPHA4P54764 986 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 LAMC2Q13753 1193 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 SAMD5Q5TGI4 173 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 LRRC69Q6ZNQ3 347 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 GLMNQ92990 594 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 CALR3Q96L12 384 aaKnown RBP7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 KIAA1024Q9UPX6 916 aa7.61□□□□□ -1.19
PRPF40A-207ENST00000471701 EML1O00423 815 aa7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 EPXP11678 715 aa7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 PSMA6P60900 246 aaKnown RBP7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 LARP1Q6PKG0 1096 aaKnown RBP7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 FNBP4Q8N3X1 1017 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 AVENQ9NQS1 362 aaPredicted RBP7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 HCN4Q9Y3Q4 1203 aa7.6□□□□□ -1.19
PRPF40A-207ENST00000471701 GPC6Q9Y625 555 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms