RNA–Protein interactions for RNA: ENST00000471667.5

LRCH3-213, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-213ENST00000471667 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
LRCH3-213ENST00000471667 PRELPP51888 382 aa6.09□□□□□ -1.43
LRCH3-213ENST00000471667 SH3BP5LQ7L8J4 393 aa6.09□□□□□ -1.43
LRCH3-213ENST00000471667 ZSCAN1Q8NBB4 408 aa6.09□□□□□ -1.43
LRCH3-213ENST00000471667 RSPH6AQ9H0K4 717 aa6.09□□□□□ -1.43
LRCH3-213ENST00000471667 BCL9LQ86UU0 1499 aa6.09□□□□□ -1.44
LRCH3-213ENST00000471667 ZC3H13Q5T200 1668 aaKnown RBP6.08□□□□□ -1.44
LRCH3-213ENST00000471667 MAGEB6P1A0A0J9YX57 407 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 MAN1A2O60476 641 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 FSHRP23945 695 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 RANGAP1P46060 587 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-213ENST00000471667 MEIOBQ8N635 442 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 SPON1Q9HCB6 807 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 POLR3EQ9NVU0 708 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 ZNF777Q9ULD5 760 aaPredicted RBP6.08□□□□□ -1.44
LRCH3-213ENST00000471667 MAP4K5Q9Y4K4 846 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 SAMD9Q5K651 1589 aa6.08□□□□□ -1.44
LRCH3-213ENST00000471667 XIRP1Q702N8 1843 aaKnown RBP6.08□□□□□ -1.44
LRCH3-213ENST00000471667 UNC13BO14795 1591 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 PLXNC1O60486 1568 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 SUPT5HO00267 1087 aaKnown RBP6.07□□□□□ -1.44
LRCH3-213ENST00000471667 PPP1R15AO75807 674 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-213ENST00000471667 UPP2O95045 317 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 BMP2P12643 396 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 VASH1Q7L8A9 365 aaPredicted RBP6.07□□□□□ -1.44
LRCH3-213ENST00000471667 TRMT44Q8IYL2 757 aaKnown RBP6.07□□□□□ -1.44
LRCH3-213ENST00000471667 LINC00528Q8N1L1 170 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 ATRNO75882 1429 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 SETD5Q9C0A6 1442 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 NCOA3Q9Y6Q9 1424 aa6.07□□□□□ -1.44
LRCH3-213ENST00000471667 VSIG8P0DPA2 414 aa6.06□□□□□ -1.44
LRCH3-213ENST00000471667 CTDSPL2Q05D32 466 aa6.06□□□□□ -1.44
LRCH3-213ENST00000471667 NBPF8Q3BBV2 869 aa6.06□□□□□ -1.44
LRCH3-213ENST00000471667 TNS4Q8IZW8 715 aa6.06□□□□□ -1.44
LRCH3-213ENST00000471667 FNBP4Q8N3X1 1017 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-213ENST00000471667 GPKOWQ92917 476 aaPredicted RBP eCLIP6.06□□□□□ -1.44
LRCH3-213ENST00000471667 GJD4Q96KN9 370 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-213ENST00000471667 CARD14Q9BXL6 1004 aa6.06□□□□□ -1.44
LRCH3-213ENST00000471667 TROQ12816 1431 aaPredicted RBP6.06□□□□□ -1.44
LRCH3-213ENST00000471667 SAMD9LQ8IVG5 1584 aa6.06□□□□□ -1.44
LRCH3-213ENST00000471667 ARHGAP23Q9P227 1491 aa6.05□□□□□ -1.44
LRCH3-213ENST00000471667 KIF3BO15066 747 aa6.05□□□□□ -1.44
LRCH3-213ENST00000471667 LTKP29376 864 aa6.05□□□□□ -1.44
LRCH3-213ENST00000471667 HNRNPMP52272 730 aaKnown RBP eCLIP6.05□□□□□ -1.44
LRCH3-213ENST00000471667 C19orf44Q9H6X5 657 aa6.05□□□□□ -1.44
LRCH3-213ENST00000471667 EMILIN1Q9Y6C2 1016 aa6.05□□□□□ -1.44
LRCH3-213ENST00000471667 RTEL1-TNFRSF6BF6WH68 1400 aa6.05□□□□□ -1.44
LRCH3-213ENST00000471667 PTCH1Q13635 1447 aa6.05□□□□□ -1.44
LRCH3-213ENST00000471667 RALGAPBQ86X10 1494 aa6.04□□□□□ -1.44
LRCH3-213ENST00000471667 ERFEQ4G0M1 354 aa6.04□□□□□ -1.44
LRCH3-213ENST00000471667 BRINP3Q76B58 766 aa6.04□□□□□ -1.44
LRCH3-213ENST00000471667 CCDC116Q8IYX3 515 aa6.04□□□□□ -1.44
LRCH3-213ENST00000471667 SLC26A8Q96RN1 970 aa6.04□□□□□ -1.44
LRCH3-213ENST00000471667 DNMT3LQ9UJW3 386 aa6.04□□□□□ -1.44
LRCH3-213ENST00000471667 PNPLA6Q8IY17 1366 aa6.04□□□□□ -1.44
LRCH3-213ENST00000471667 KDM5AP29375 1690 aaKnown RBP6.04□□□□□ -1.44
LRCH3-213ENST00000471667 NCOA2Q15596 1464 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 PLEKHH2Q8IVE3 1493 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 SOS2Q07890 1332 aaPredicted RBP6.03□□□□□ -1.44
LRCH3-213ENST00000471667 DIP2AQ14689 1571 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 PPFIA3O75145 1194 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 HSPA6P17066 643 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 KRT27Q7Z3Y8 459 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 LRRN4Q8WUT4 740 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 TSEN34Q9BSV6 310 aaKnown RBP6.03□□□□□ -1.44
LRCH3-213ENST00000471667 SLIT1O75093 1534 aa6.03□□□□□ -1.44
LRCH3-213ENST00000471667 FAM83GA6ND36 823 aa6.02□□□□□ -1.45
LRCH3-213ENST00000471667 KCNQ2O43526 872 aa6.02□□□□□ -1.45
LRCH3-213ENST00000471667 PPP1R26Q5T8A7 1209 aaPredicted RBP6.02□□□□□ -1.45
LRCH3-213ENST00000471667 PDXDC2PQ6P474 469 aa6.02□□□□□ -1.45
LRCH3-213ENST00000471667 ARHGAP9Q9BRR9 750 aa6.02□□□□□ -1.45
LRCH3-213ENST00000471667 DHX29Q7Z478 1369 aaKnown RBP6.02□□□□□ -1.45
LRCH3-213ENST00000471667 MROH1Q8NDA8 1641 aa6.02□□□□□ -1.45
LRCH3-213ENST00000471667 ADGBQ8N7X0 1667 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 SYCP2Q9BX26 1530 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 PREX2Q70Z35 1606 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 TTLL8A6PVC2 850 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 CBLBQ13191 982 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 SKIV2LQ15477 1246 aaKnown RBP6.01□□□□□ -1.45
LRCH3-213ENST00000471667 SEPT12Q8IYM1 358 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 SLC10A4Q96EP9 437 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 PGPEP1Q9NXJ5 209 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 FKBPLQ9UIM3 349 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 AATKQ6ZMQ8 1374 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 TMEM2Q9UHN6 1383 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 PRXQ9BXM0 1461 aa6.01□□□□□ -1.45
LRCH3-213ENST00000471667 NR6A1Q15406 480 aa6□□□□□ -1.45
LRCH3-213ENST00000471667 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6□□□□□ -1.45
LRCH3-213ENST00000471667 SH3D19Q5HYK7 790 aa6□□□□□ -1.45
LRCH3-213ENST00000471667 PROCA1Q8NCQ7 364 aaPredicted RBP6□□□□□ -1.45
LRCH3-213ENST00000471667 KCTD15Q96SI1 283 aaPredicted RBP6□□□□□ -1.45
LRCH3-213ENST00000471667 CCDC9Q9Y3X0 531 aaKnown RBP6□□□□□ -1.45
LRCH3-213ENST00000471667 EP400Q96L91 3159 aa6□□□□□ -1.45
LRCH3-213ENST00000471667 FMN1Q68DA7 1419 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 KIAA1107Q9UPP5 1409 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 ASXL1Q8IXJ9 1541 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 SPHKAPQ2M3C7 1700 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 INO80Q9ULG1 1556 aaPredicted RBP5.99□□□□□ -1.45
LRCH3-213ENST00000471667 ERVK-7P63135 1459 aa5.99□□□□□ -1.45
LRCH3-213ENST00000471667 ARHGAP35Q9NRY4 1499 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms