RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 ABCC5O15440 1437 aa11.11□□□□□ -0.63
LDHB-206ENST00000470985 ZBTB24O43167 697 aaPredicted RBP11.11□□□□□ -0.63
LDHB-206ENST00000470985 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
LDHB-206ENST00000470985 ABCA3Q99758 1704 aa11.1□□□□□ -0.63
LDHB-206ENST00000470985 CD46P15529 392 aa11.1□□□□□ -0.63
LDHB-206ENST00000470985 HTRA3P83110 453 aa11.1□□□□□ -0.63
LDHB-206ENST00000470985 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
LDHB-206ENST00000470985 JMYQ8N9B5 988 aa11.1□□□□□ -0.63
LDHB-206ENST00000470985 BTG4Q9NY30 223 aa11.1□□□□□ -0.63
LDHB-206ENST00000470985 ROBO2Q9HCK4 1378 aa11.09□□□□□ -0.63
LDHB-206ENST00000470985 ARXQ96QS3 562 aa11.09□□□□□ -0.63
LDHB-206ENST00000470985 ADCY9O60503 1353 aa11.08□□□□□ -0.64
LDHB-206ENST00000470985 ZNF697Q5TEC3 545 aa11.08□□□□□ -0.64
LDHB-206ENST00000470985 KLRG1Q96E93 195 aa11.08□□□□□ -0.64
LDHB-206ENST00000470985 YBX3P16989 372 aaKnown RBP eCLIP11.07□□□□□ -0.643e-18■□□□□ 10.3
LDHB-206ENST00000470985 PKDCCQ504Y2 493 aa11.07□□□□□ -0.64
LDHB-206ENST00000470985 BRICD5Q6PL45 260 aa11.07□□□□□ -0.64
LDHB-206ENST00000470985 MTFR1LQ9H019 292 aa11.07□□□□□ -0.64
LDHB-206ENST00000470985 LIAT1Q6ZQX7 453 aa11.06□□□□□ -0.64
LDHB-206ENST00000470985 THAP11Q96EK4 314 aa11.06□□□□□ -0.64
LDHB-206ENST00000470985 RRP7BPQ9NSQ0 103 aa11.06□□□□□ -0.64
LDHB-206ENST00000470985 RPIAP49247 311 aa11.05□□□□□ -0.64
LDHB-206ENST00000470985 TNS3Q68CZ2 1445 aa11.05□□□□□ -0.64
LDHB-206ENST00000470985 FCF1Q9Y324 198 aaKnown RBP11.05□□□□□ -0.64
LDHB-206ENST00000470985 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
LDHB-206ENST00000470985 WDR90Q96KV7 1748 aa11.04□□□□□ -0.64
LDHB-206ENST00000470985 TTLL12Q14166 644 aaPredicted RBP11.04□□□□□ -0.64
LDHB-206ENST00000470985 NLGN2Q8NFZ4 835 aa11.04□□□□□ -0.64
LDHB-206ENST00000470985 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
LDHB-206ENST00000470985 MSS51Q4VC12 460 aa11.03□□□□□ -0.64
LDHB-206ENST00000470985 CDC42BPGQ6DT37 1551 aa11.03□□□□□ -0.64
LDHB-206ENST00000470985 CCDC144AA2RUR9 1427 aa11.02□□□□□ -0.64
LDHB-206ENST00000470985 BARGINQ6ZT62 677 aa11.02□□□□□ -0.65
LDHB-206ENST00000470985 FAM160A2Q8N612 972 aaPredicted RBP11.02□□□□□ -0.65
LDHB-206ENST00000470985 USB1Q9BQ65 265 aaKnown RBP11.02□□□□□ -0.65
LDHB-206ENST00000470985 RGPD3A6NKT7 1758 aaPredicted RBP11.02□□□□□ -0.65
LDHB-206ENST00000470985 RGPD4Q7Z3J3 1758 aa11.02□□□□□ -0.65
LDHB-206ENST00000470985 SPATA31A1Q5TZJ5 1347 aa11.02□□□□□ -0.65
LDHB-206ENST00000470985 RRBP1Q9P2E9 1410 aaKnown RBP11.01□□□□□ -0.65
LDHB-206ENST00000470985 PRR20EP86478 221 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 PRR20CP86479 221 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 PRR20DP86480 221 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 PRR20BP86481 221 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 PRR20AP86496 221 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 PTF1AQ7RTS3 328 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
LDHB-206ENST00000470985 TECPR2O15040 1411 aa11.01□□□□□ -0.65
LDHB-206ENST00000470985 ZMYND10O75800 440 aa11□□□□□ -0.65
LDHB-206ENST00000470985 DGAT1O75907 488 aa11□□□□□ -0.65
LDHB-206ENST00000470985 FOXC1Q12948 553 aa11□□□□□ -0.65
LDHB-206ENST00000470985 ZC3H15Q8WU90 426 aaKnown RBP11□□□□□ -0.65
LDHB-206ENST00000470985 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
LDHB-206ENST00000470985 TNFRSF10AO00220 468 aa10.99□□□□□ -0.65
LDHB-206ENST00000470985 HSPA1AP0DMV8 641 aaKnown RBP10.99□□□□□ -0.65
LDHB-206ENST00000470985 HSPA1BP0DMV9 641 aaKnown RBP10.99□□□□□ -0.65
LDHB-206ENST00000470985 SSTR3P32745 418 aaPredicted RBP10.99□□□□□ -0.65
LDHB-206ENST00000470985 PDE3BQ13370 1112 aa10.99□□□□□ -0.65
LDHB-206ENST00000470985 SLC15A2Q16348 729 aa10.99□□□□□ -0.65
LDHB-206ENST00000470985 RNF19BQ6ZMZ0 732 aa10.99□□□□□ -0.65
LDHB-206ENST00000470985 STK32BQ9NY57 414 aa10.98□□□□□ -0.65
LDHB-206ENST00000470985 PLSCR1O15162 318 aa10.97□□□□□ -0.65
LDHB-206ENST00000470985 HOXA2O43364 376 aa10.97□□□□□ -0.65
LDHB-206ENST00000470985 GRIN3BO60391 1043 aa10.97□□□□□ -0.65
LDHB-206ENST00000470985 PLA2G2CQ5R387 149 aa10.96□□□□□ -0.65
LDHB-206ENST00000470985 CCDC24Q8N4L8 307 aa10.96□□□□□ -0.65
LDHB-206ENST00000470985 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.65
LDHB-206ENST00000470985 USP35Q9P2H5 1018 aa10.96□□□□□ -0.65
LDHB-206ENST00000470985 IQGAP3Q86VI3 1631 aa10.95□□□□□ -0.66
LDHB-206ENST00000470985 HFM1A2PYH4 1435 aa10.95□□□□□ -0.66
LDHB-206ENST00000470985 PRAG1Q86YV5 1406 aa10.95□□□□□ -0.66
LDHB-206ENST00000470985 FAM187AA6NFU0 413 aa10.95□□□□□ -0.66
LDHB-206ENST00000470985 DIXDC1Q155Q3 683 aa10.95□□□□□ -0.66
LDHB-206ENST00000470985 CYP4X1Q8N118 509 aa10.95□□□□□ -0.66
LDHB-206ENST00000470985 NAIPQ13075 1403 aa10.94□□□□□ -0.66
LDHB-206ENST00000470985 MMP16P51512 607 aa10.94□□□□□ -0.66
LDHB-206ENST00000470985 TRIM67Q6ZTA4 783 aa10.94□□□□□ -0.66
LDHB-206ENST00000470985 PRDM9Q9NQV7 894 aa10.94□□□□□ -0.66
LDHB-206ENST00000470985 KIF1AQ12756 1690 aa10.94□□□□□ -0.66
LDHB-206ENST00000470985 ARHGEF10O15013 1369 aa10.93□□□□□ -0.66
LDHB-206ENST00000470985 GDF9O60383 454 aa10.93□□□□□ -0.66
LDHB-206ENST00000470985 TOMM70O94826 608 aa10.93□□□□□ -0.66
LDHB-206ENST00000470985 ZNF787Q6DD87 383 aa10.93□□□□□ -0.66
LDHB-206ENST00000470985 PEAK1Q9H792 1746 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 SBNO1A3KN83 1393 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 C6orf229H3BNL8 230 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 FDX1P10109 184 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 AMHR2Q16671 573 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 AK7Q96M32 723 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 STRN4Q9NRL3 753 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 MYOM3Q5VTT5 1437 aa10.92□□□□□ -0.66
LDHB-206ENST00000470985 TTC24A2A3L6 582 aaPredicted RBP10.91□□□□□ -0.66
LDHB-206ENST00000470985 TXNRD1Q16881 649 aa10.9□□□□□ -0.66
LDHB-206ENST00000470985 RETREG3Q86VR2 466 aa10.9□□□□□ -0.66
LDHB-206ENST00000470985 OVOS2A0A0G2JMS6 1433 aa10.9□□□□□ -0.66
LDHB-206ENST00000470985 OVOS2A0A0J9YW53 1432 aa10.9□□□□□ -0.66
LDHB-206ENST00000470985 OVOS2Q6IE36 1432 aa10.9□□□□□ -0.66
LDHB-206ENST00000470985 DXOO77932 396 aaKnown RBP10.89□□□□□ -0.67
LDHB-206ENST00000470985 HLA-CQ95604 372 aa10.89□□□□□ -0.67
LDHB-206ENST00000470985 PRDM11Q9NQV5 511 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms