RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 CCDC9Q9Y3X0 531 aaKnown RBP22.78■■□□□ 1.24
SMC4-211ENST00000469858 KAT6BQ8WYB5 2073 aa22.78■■□□□ 1.24
SMC4-211ENST00000469858 TMOD3Q9NYL9 352 aa22.78■■□□□ 1.24
SMC4-211ENST00000469858 PDIA6Q15084 440 aa22.77■■□□□ 1.24
SMC4-211ENST00000469858 DNAAF4Q8WXU2 420 aa22.77■■□□□ 1.24
SMC4-211ENST00000469858 C8orf37Q96NL8 207 aa22.77■■□□□ 1.24
SMC4-211ENST00000469858 USP16Q9Y5T5 823 aa22.77■■□□□ 1.24
SMC4-211ENST00000469858 SPATA31A5Q5VU36 1347 aa22.77■■□□□ 1.24
SMC4-211ENST00000469858 SPATA31A7Q8IWB4 1347 aa22.77■■□□□ 1.24
SMC4-211ENST00000469858 KCPQ6ZWJ8 1503 aa22.77■■□□□ 1.24
SMC4-211ENST00000469858 ADCY9O60503 1353 aa22.77■■□□□ 1.23
SMC4-211ENST00000469858 CDCA7Q9BWT1 371 aaPredicted RBP22.76■■□□□ 1.23
SMC4-211ENST00000469858 MYL6BP14649 208 aa22.75■■□□□ 1.23
SMC4-211ENST00000469858 PDE4AP27815 886 aa22.75■■□□□ 1.23
SMC4-211ENST00000469858 CEP85Q6P2H3 762 aa22.74■■□□□ 1.23
SMC4-211ENST00000469858 ANKRD44Q8N8A2 993 aa22.74■■□□□ 1.23
SMC4-211ENST00000469858 NGLY1Q96IV0 654 aa22.74■■□□□ 1.23
SMC4-211ENST00000469858 SRCIN1Q9C0H9 1055 aa22.74■■□□□ 1.23
SMC4-211ENST00000469858 LRP6O75581 1613 aa22.74■■□□□ 1.23
SMC4-211ENST00000469858 RPAP2Q8IXW5 612 aaPredicted RBP22.74■■□□□ 1.23
SMC4-211ENST00000469858 PTCD1O75127 700 aaKnown RBP22.73■■□□□ 1.23
SMC4-211ENST00000469858 GNAI3P08754 354 aa22.73■■□□□ 1.23
SMC4-211ENST00000469858 AIMP1Q12904 312 aaKnown RBP22.73■■□□□ 1.23
SMC4-211ENST00000469858 UNC5CLQ8IV45 518 aa22.73■■□□□ 1.23
SMC4-211ENST00000469858 GCC1Q96CN9 775 aa22.73■■□□□ 1.23
SMC4-211ENST00000469858 MAP3K2Q9Y2U5 619 aa22.73■■□□□ 1.23
SMC4-211ENST00000469858 GNAI2P04899 355 aa22.72■■□□□ 1.23
SMC4-211ENST00000469858 DDB1Q16531 1140 aa22.72■■□□□ 1.23
SMC4-211ENST00000469858 KSR2Q6VAB6 950 aa22.72■■□□□ 1.23
SMC4-211ENST00000469858 PIP4K2AP48426 406 aaPredicted RBP22.72■■□□□ 1.23
SMC4-211ENST00000469858 BEND3Q5T5X7 828 aa22.72■■□□□ 1.23
SMC4-211ENST00000469858 SPATA31A6Q5VVP1 1343 aa22.72■■□□□ 1.23
SMC4-211ENST00000469858 DOT1LQ8TEK3 1739 aa22.72■■□□□ 1.23
SMC4-211ENST00000469858 PIGBQ92521 554 aa22.72■■□□□ 1.23
SMC4-211ENST00000469858 DDX58O95786 925 aaKnown RBP22.71■■□□□ 1.23
SMC4-211ENST00000469858 NUCB1Q02818 461 aa22.71■■□□□ 1.23
SMC4-211ENST00000469858 BACH2Q9BYV9 841 aa22.71■■□□□ 1.23
SMC4-211ENST00000469858 USP44Q9H0E7 712 aa22.7■■□□□ 1.23
SMC4-211ENST00000469858 BCL9LQ86UU0 1499 aa22.7■■□□□ 1.22
SMC4-211ENST00000469858 BARGINQ6ZT62 677 aa22.69■■□□□ 1.22
SMC4-211ENST00000469858 XAGE3Q8WTP9 111 aa22.69■■□□□ 1.22
SMC4-211ENST00000469858 UBTFL1P0CB47 393 aaPredicted RBP22.69■■□□□ 1.22
SMC4-211ENST00000469858 HSPA1LP34931 641 aa22.69■■□□□ 1.22
SMC4-211ENST00000469858 LNPKQ9C0E8 428 aa22.69■■□□□ 1.22
SMC4-211ENST00000469858 ASAP1Q9ULH1 1129 aa22.69■■□□□ 1.22
SMC4-211ENST00000469858 ANKRD45Q5TZF3 282 aa22.68■■□□□ 1.22
SMC4-211ENST00000469858 COPS6Q7L5N1 327 aa22.68■■□□□ 1.22
SMC4-211ENST00000469858 CHD1LQ86WJ1 897 aa22.68■■□□□ 1.22
SMC4-211ENST00000469858 SYTL4Q96C24 671 aaPredicted RBP22.68■■□□□ 1.22
SMC4-211ENST00000469858 BCL9O00512 1426 aa22.68■■□□□ 1.22
SMC4-211ENST00000469858 LRP10Q7Z4F1 713 aa22.67■■□□□ 1.22
SMC4-211ENST00000469858 LRRFIP2Q9Y608 721 aaKnown RBP22.67■■□□□ 1.22
SMC4-211ENST00000469858 FAM161AQ3B820 660 aa22.67■■□□□ 1.22
SMC4-211ENST00000469858 RIC3Q7Z5B4 369 aa22.67■■□□□ 1.22
SMC4-211ENST00000469858 DCTPP1Q9H773 170 aa22.67■■□□□ 1.22
SMC4-211ENST00000469858 HMMRO75330 724 aa22.66■■□□□ 1.22
SMC4-211ENST00000469858 VPS72Q15906 364 aa22.66■■□□□ 1.22
SMC4-211ENST00000469858 ATG3Q9NT62 314 aa22.66■■□□□ 1.22
SMC4-211ENST00000469858 FNBP4Q8N3X1 1017 aaPredicted RBP22.65■■□□□ 1.22
SMC4-211ENST00000469858 ERBB4Q15303 1308 aa22.65■■□□□ 1.22
SMC4-211ENST00000469858 C8orf34Q49A92 452 aa22.65■■□□□ 1.22
SMC4-211ENST00000469858 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.64■■□□□ 1.22
SMC4-211ENST00000469858 ALDH1L1O75891 902 aa22.64■■□□□ 1.21
SMC4-211ENST00000469858 FAM98CQ17RN3 349 aaKnown RBP22.64■■□□□ 1.21
SMC4-211ENST00000469858 ARFGEF2Q9Y6D5 1785 aa22.64■■□□□ 1.21
SMC4-211ENST00000469858 NBPF26B4DH59 902 aa22.63■■□□□ 1.21
SMC4-211ENST00000469858 NBPF7P0C2Y1 421 aaPredicted RBP22.63■■□□□ 1.21
SMC4-211ENST00000469858 PRIM1P49642 420 aaKnown RBP22.63■■□□□ 1.21
SMC4-211ENST00000469858 CWF19L2Q2TBE0 894 aaKnown RBP22.63■■□□□ 1.21
SMC4-211ENST00000469858 NBPF14Q5TI25 921 aa22.63■■□□□ 1.21
SMC4-211ENST00000469858 NBPF10Q6P3W6 841 aaKnown RBP22.63■■□□□ 1.21
SMC4-211ENST00000469858 NBPF15Q8N660 670 aa22.63■■□□□ 1.21
SMC4-211ENST00000469858 MARCH10Q8NA82 808 aaPredicted RBP22.63■■□□□ 1.21
SMC4-211ENST00000469858 LINS1Q8NG48 757 aa22.63■■□□□ 1.21
SMC4-211ENST00000469858 RBM42Q9BTD8 480 aaKnown RBP22.63■■□□□ 1.21
SMC4-211ENST00000469858 USP21Q9UK80 565 aa22.63■■□□□ 1.21
SMC4-211ENST00000469858 A1BGP04217 495 aa22.62■■□□□ 1.21
SMC4-211ENST00000469858 MEX3CQ5U5Q3 659 aaKnown RBP22.62■■□□□ 1.21
SMC4-211ENST00000469858 ANKRD13DQ6ZTN6 518 aa22.62■■□□□ 1.21
SMC4-211ENST00000469858 A0A0G2JS52 829 aa22.61■■□□□ 1.21
SMC4-211ENST00000469858 PNMA6EA0A0J9YXQ4 647 aa22.61■■□□□ 1.21
SMC4-211ENST00000469858 C9orf78Q9NZ63 289 aaPredicted RBP22.61■■□□□ 1.21
SMC4-211ENST00000469858 AFDNP55196 1824 aaKnown RBP22.6■■□□□ 1.21
SMC4-211ENST00000469858 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
SMC4-211ENST00000469858 NEXNQ0ZGT2 675 aa22.6■■□□□ 1.21
SMC4-211ENST00000469858 VSIG10Q8N0Z9 540 aa22.6■■□□□ 1.21
SMC4-211ENST00000469858 DNAJC10Q8IXB1 793 aa22.59■■□□□ 1.21
SMC4-211ENST00000469858 ACSBG1Q96GR2 724 aa22.59■■□□□ 1.21
SMC4-211ENST00000469858 METTL22Q9BUU2 404 aaPredicted RBP22.59■■□□□ 1.21
SMC4-211ENST00000469858 MYD88Q99836 296 aa22.59■■□□□ 1.21
SMC4-211ENST00000469858 ZBTB47Q9UFB7 747 aaPredicted RBP22.59■■□□□ 1.21
SMC4-211ENST00000469858 APBB1O00213 710 aa22.58■■□□□ 1.21
SMC4-211ENST00000469858 IGKV5-2P06315 115 aa22.58■■□□□ 1.21
SMC4-211ENST00000469858 TEX13AQ9BXU3 409 aaPredicted RBP22.58■■□□□ 1.21
SMC4-211ENST00000469858 MYT1Q01538 1121 aa22.58■■□□□ 1.2
SMC4-211ENST00000469858 BCL11AQ9H165 835 aa22.58■■□□□ 1.2
SMC4-211ENST00000469858 NUP188Q5SRE5 1749 aa22.57■■□□□ 1.2
SMC4-211ENST00000469858 PLBD2Q8NHP8 589 aa22.57■■□□□ 1.2
SMC4-211ENST00000469858 NEURL1BA8MQ27 555 aa22.56■■□□□ 1.2
SMC4-211ENST00000469858 GRM8O00222 908 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms