RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 PHKG2P15735 406 aa17.81■□□□□ 0.44
HDAC6-217ENST00000469223 DPY19L2Q6NUT2 758 aa17.81■□□□□ 0.44
HDAC6-217ENST00000469223 ADAMTSL1Q8N6G6 1762 aa17.8■□□□□ 0.44
HDAC6-217ENST00000469223 LTBP1Q14766 1721 aa17.79■□□□□ 0.44
HDAC6-217ENST00000469223 IFNL2Q8IZJ0 200 aa17.79■□□□□ 0.44
HDAC6-217ENST00000469223 TMEM88BA6NKF7 163 aa17.78■□□□□ 0.44
HDAC6-217ENST00000469223 CRKLP46109 303 aaKnown RBP17.78■□□□□ 0.44
HDAC6-217ENST00000469223 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
HDAC6-217ENST00000469223 CFAP44Q96MT7 982 aa17.78■□□□□ 0.44
HDAC6-217ENST00000469223 CARMIL3Q8ND23 1372 aa17.78■□□□□ 0.44
HDAC6-217ENST00000469223 TONSLQ96HA7 1378 aa17.78■□□□□ 0.44
HDAC6-217ENST00000469223 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
HDAC6-217ENST00000469223 CARD11Q9BXL7 1154 aa17.77■□□□□ 0.44
HDAC6-217ENST00000469223 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
HDAC6-217ENST00000469223 ARFGEF2Q9Y6D5 1785 aa17.76■□□□□ 0.43
HDAC6-217ENST00000469223 FYB1O15117 783 aa17.76■□□□□ 0.43
HDAC6-217ENST00000469223 LDHDQ86WU2 507 aa17.76■□□□□ 0.43
HDAC6-217ENST00000469223 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
HDAC6-217ENST00000469223 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.76■□□□□ 0.431e-11■■□□□ 11.5
HDAC6-217ENST00000469223 CASP8AP2Q9UKL3 1982 aa17.76■□□□□ 0.43
HDAC6-217ENST00000469223 DDNO94850 711 aaPredicted RBP17.75■□□□□ 0.43
HDAC6-217ENST00000469223 TM4SF1P30408 202 aa17.75■□□□□ 0.43
HDAC6-217ENST00000469223 MAP2K1Q02750 393 aaPredicted RBP17.74■□□□□ 0.43
HDAC6-217ENST00000469223 C2CD5Q86YS7 1000 aa17.74■□□□□ 0.43
HDAC6-217ENST00000469223 RASSF10A6NK89 507 aa17.73■□□□□ 0.43
HDAC6-217ENST00000469223 USPL1Q5W0Q7 1092 aa17.73■□□□□ 0.43
HDAC6-217ENST00000469223 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
HDAC6-217ENST00000469223 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
HDAC6-217ENST00000469223 PTCD1O75127 700 aaKnown RBP17.72■□□□□ 0.43
HDAC6-217ENST00000469223 SLX4Q8IY92 1834 aa17.72■□□□□ 0.43
HDAC6-217ENST00000469223 TRPM7Q96QT4 1865 aa17.71■□□□□ 0.43
HDAC6-217ENST00000469223 IQCA1LA6NCM1 817 aa17.71■□□□□ 0.43
HDAC6-217ENST00000469223 ERVV-2B6SEH9 535 aa17.71■□□□□ 0.43
HDAC6-217ENST00000469223 ZPR1O75312 459 aa17.71■□□□□ 0.43
HDAC6-217ENST00000469223 ITGBL1O95965 494 aaPredicted RBP17.71■□□□□ 0.43
HDAC6-217ENST00000469223 DEFB115Q30KQ5 88 aa17.71■□□□□ 0.43
HDAC6-217ENST00000469223 SIN3AQ96ST3 1273 aa17.71■□□□□ 0.43
HDAC6-217ENST00000469223 EYA1Q99502 592 aa17.71■□□□□ 0.43
HDAC6-217ENST00000469223 PPM1GO15355 546 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-217ENST00000469223 NFIXQ14938 502 aa17.7■□□□□ 0.42
HDAC6-217ENST00000469223 EAPPQ56P03 285 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-217ENST00000469223 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
HDAC6-217ENST00000469223 SCN11AQ9UI33 1791 aa17.7■□□□□ 0.42
HDAC6-217ENST00000469223 H0YIN7 160 aa17.69■□□□□ 0.42
HDAC6-217ENST00000469223 C21orf2O43822 256 aa17.69■□□□□ 0.42
HDAC6-217ENST00000469223 TSKSQ9UJT2 592 aa17.69■□□□□ 0.42
HDAC6-217ENST00000469223 SCN7AQ01118 1682 aa17.68■□□□□ 0.42
HDAC6-217ENST00000469223 TAOK3Q9H2K8 898 aa17.68■□□□□ 0.42
HDAC6-217ENST00000469223 ABT1Q9ULW3 272 aaKnown RBP17.68■□□□□ 0.42
HDAC6-217ENST00000469223 COL15A1P39059 1388 aa17.67■□□□□ 0.42
HDAC6-217ENST00000469223 SERPINB2P05120 415 aa17.67■□□□□ 0.42
HDAC6-217ENST00000469223 INTS5Q6P9B9 1019 aaKnown RBP17.67■□□□□ 0.42
HDAC6-217ENST00000469223 L3MBTL3Q96JM7 780 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-217ENST00000469223 MCOLN1Q9GZU1 580 aa17.67■□□□□ 0.42
HDAC6-217ENST00000469223 SOS1Q07889 1333 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-217ENST00000469223 LTBP3Q9NS15 1303 aa17.67■□□□□ 0.42
HDAC6-217ENST00000469223 CABP4P57796 275 aa17.66■□□□□ 0.42
HDAC6-217ENST00000469223 NEUROD1Q13562 356 aa17.66■□□□□ 0.42
HDAC6-217ENST00000469223 TESK2Q96S53 571 aa17.66■□□□□ 0.42
HDAC6-217ENST00000469223 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
HDAC6-217ENST00000469223 CLEC11AQ9Y240 323 aa17.66■□□□□ 0.42
HDAC6-217ENST00000469223 PAXIP1Q6ZW49 1069 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-217ENST00000469223 ZNF622Q969S3 477 aaKnown RBP eCLIP17.65■□□□□ 0.421e-7■□□□□ 10.9
HDAC6-217ENST00000469223 HSP90AB1P08238 724 aaKnown RBP17.64■□□□□ 0.41
HDAC6-217ENST00000469223 GRM1Q13255 1194 aa17.64■□□□□ 0.41
HDAC6-217ENST00000469223 MAP1SQ66K74 1059 aaPredicted RBP17.64■□□□□ 0.41
HDAC6-217ENST00000469223 CAPNS2Q96L46 248 aa17.63■□□□□ 0.41
HDAC6-217ENST00000469223 NARFQ9UHQ1 456 aa17.63■□□□□ 0.41
HDAC6-217ENST00000469223 WASHC2AQ641Q2 1341 aa17.63■□□□□ 0.41
HDAC6-217ENST00000469223 ZNF530Q6P9A1 599 aaPredicted RBP17.62■□□□□ 0.41
HDAC6-217ENST00000469223 BCL2L12Q9HB09 334 aa17.62■□□□□ 0.41
HDAC6-217ENST00000469223 ZNF541Q9H0D2 1346 aa17.62■□□□□ 0.41
HDAC6-217ENST00000469223 DNAJC10Q8IXB1 793 aa17.61■□□□□ 0.41
HDAC6-217ENST00000469223 CNTROBQ8N137 903 aa17.61■□□□□ 0.41
HDAC6-217ENST00000469223 HACL1Q9UJ83 578 aa17.61■□□□□ 0.41
HDAC6-217ENST00000469223 EPHX2P34913 555 aa17.6■□□□□ 0.41
HDAC6-217ENST00000469223 CYP4F22Q6NT55 531 aa17.6■□□□□ 0.41
HDAC6-217ENST00000469223 BCORQ6W2J9 1755 aa17.59■□□□□ 0.41
HDAC6-217ENST00000469223 RNF123Q5XPI4 1314 aa17.59■□□□□ 0.41
HDAC6-217ENST00000469223 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
HDAC6-217ENST00000469223 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
HDAC6-217ENST00000469223 ECE1P42892 770 aa17.58■□□□□ 0.4
HDAC6-217ENST00000469223 DGKZQ13574 1117 aa17.58■□□□□ 0.4
HDAC6-217ENST00000469223 EIF4A2Q14240 407 aaKnown RBP17.58■□□□□ 0.4
HDAC6-217ENST00000469223 CCDC24Q8N4L8 307 aa17.58■□□□□ 0.4
HDAC6-217ENST00000469223 GPR101Q96P66 508 aaPredicted RBP17.58■□□□□ 0.4
HDAC6-217ENST00000469223 ZBTB1Q9Y2K1 713 aa17.58■□□□□ 0.4
HDAC6-217ENST00000469223 PRPF38BQ5VTL8 546 aaKnown RBP17.57■□□□□ 0.4
HDAC6-217ENST00000469223 PRPF40BQ6NWY9 871 aaKnown RBP17.57■□□□□ 0.4
HDAC6-217ENST00000469223 NFATC2IPQ8NCF5 419 aa17.57■□□□□ 0.4
HDAC6-217ENST00000469223 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
HDAC6-217ENST00000469223 UBR2Q8IWV8 1755 aa17.57■□□□□ 0.4
HDAC6-217ENST00000469223 AOC2O75106 756 aa17.56■□□□□ 0.4
HDAC6-217ENST00000469223 PDE6BP35913 854 aa17.56■□□□□ 0.4
HDAC6-217ENST00000469223 MTHFSP49914 203 aa17.56■□□□□ 0.4
HDAC6-217ENST00000469223 SOX10P56693 466 aa17.56■□□□□ 0.4
HDAC6-217ENST00000469223 FMR1Q06787 632 aaKnown RBP eCLIP17.56■□□□□ 0.4
HDAC6-217ENST00000469223 CYP19A1P11511 503 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-217ENST00000469223 PLEKHO1Q53GL0 409 aaPredicted RBP17.55■□□□□ 0.4
HDAC6-217ENST00000469223 PNMA8AQ86V59 439 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms