RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 NARFQ9UHQ1 456 aa9.54□□□□□ -0.88
SNRPD3-205ENST00000468770 TJP1Q07157 1748 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 HEG1Q9ULI3 1381 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 KCPQ6ZWJ8 1503 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 ADAMTS7Q9UKP4 1686 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 A0A087WZG4 1122 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 KCNQ3O43525 872 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 TM4SF1P30408 202 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 DCTN1Q14203 1278 aa9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 ZNF330Q9Y3S2 320 aaPredicted RBP9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 VIRMAQ69YN4 1812 aaKnown RBP9.53□□□□□ -0.88
SNRPD3-205ENST00000468770 COL15A1P39059 1388 aa9.52□□□□□ -0.88
SNRPD3-205ENST00000468770 DPEP1P16444 411 aa9.52□□□□□ -0.89
SNRPD3-205ENST00000468770 EIF5P55010 431 aaKnown RBP9.52□□□□□ -0.89
SNRPD3-205ENST00000468770 DDR1Q08345 913 aa9.52□□□□□ -0.89
SNRPD3-205ENST00000468770 TAF7Q15545 349 aaPredicted RBP9.52□□□□□ -0.89
SNRPD3-205ENST00000468770 BCS1LQ9Y276 419 aa9.52□□□□□ -0.89
SNRPD3-205ENST00000468770 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.89
SNRPD3-205ENST00000468770 POLRMTO00411 1230 aaKnown RBP9.51□□□□□ -0.89
SNRPD3-205ENST00000468770 A1BGP04217 495 aa9.51□□□□□ -0.89
SNRPD3-205ENST00000468770 SNRPA1P09661 255 aaKnown RBP9.51□□□□□ -0.89
SNRPD3-205ENST00000468770 NFIXQ14938 502 aa9.51□□□□□ -0.89
SNRPD3-205ENST00000468770 PLEKHF1Q96S99 279 aa9.51□□□□□ -0.89
SNRPD3-205ENST00000468770 MAPK8IP3Q9UPT6 1336 aa9.51□□□□□ -0.89
SNRPD3-205ENST00000468770 C10orf71Q711Q0 1435 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 IL6STP40189 918 aaPredicted RBP9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 BICDL1Q6ZP65 573 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 BCL2L12Q9HB09 334 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 PIM2Q9P1W9 311 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 TBC1D2BQ9UPU7 963 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 PXDNLA1KZ92 1463 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 C4AP0C0L4 1744 aa9.5□□□□□ -0.89
SNRPD3-205ENST00000468770 SERPINB2P05120 415 aa9.49□□□□□ -0.89
SNRPD3-205ENST00000468770 KCNA3P22001 575 aa9.49□□□□□ -0.89
SNRPD3-205ENST00000468770 NFE2L2Q16236 605 aa9.49□□□□□ -0.89
SNRPD3-205ENST00000468770 ARHGAP27Q6ZUM4 889 aa9.49□□□□□ -0.89
SNRPD3-205ENST00000468770 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
SNRPD3-205ENST00000468770 MIS18AQ9NYP9 233 aa9.49□□□□□ -0.89
SNRPD3-205ENST00000468770 UBR2Q8IWV8 1755 aa9.49□□□□□ -0.89
SNRPD3-205ENST00000468770 PRAMEF22A3QJZ6 481 aa9.48□□□□□ -0.89
SNRPD3-205ENST00000468770 GIGYF1O75420 1035 aaPredicted RBP9.48□□□□□ -0.89
SNRPD3-205ENST00000468770 CHRNA5P30532 468 aa9.48□□□□□ -0.89
SNRPD3-205ENST00000468770 DALRD3Q5D0E6 543 aaKnown RBP9.48□□□□□ -0.89
SNRPD3-205ENST00000468770 MYBBP1AQ9BQG0 1328 aaKnown RBP9.48□□□□□ -0.89
SNRPD3-205ENST00000468770 SIPA1L3O60292 1781 aaPredicted RBP9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 KIF13BQ9NQT8 1826 aa9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 PIP4K2AP48426 406 aaPredicted RBP9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 RIPK4P57078 832 aa9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 DZIP3Q86Y13 1208 aaKnown RBP9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 SETDB2Q96T68 719 aa9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 THUMPD2Q9BTF0 503 aaKnown RBP9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 GPBP1L1Q9HC44 474 aaPredicted RBP9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 N4BP2Q86UW6 1770 aaPredicted RBP9.47□□□□□ -0.89
SNRPD3-205ENST00000468770 NPHP1O15259 732 aa9.46□□□□□ -0.9
SNRPD3-205ENST00000468770 CAMTA2O94983 1202 aa9.46□□□□□ -0.9
SNRPD3-205ENST00000468770 C1QTNF8P60827 252 aa9.46□□□□□ -0.9
SNRPD3-205ENST00000468770 ZNF526Q8TF50 670 aaPredicted RBP9.46□□□□□ -0.9
SNRPD3-205ENST00000468770 ATP10DQ9P241 1426 aa9.46□□□□□ -0.9
SNRPD3-205ENST00000468770 H0YIN7 160 aa9.45□□□□□ -0.9
SNRPD3-205ENST00000468770 ZEB1P37275 1124 aaPredicted RBP9.45□□□□□ -0.9
SNRPD3-205ENST00000468770 WDR43Q15061 677 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNRPD3-205ENST00000468770 CLEC4GQ6UXB4 293 aa9.45□□□□□ -0.9
SNRPD3-205ENST00000468770 C2CD5Q86YS7 1000 aa9.45□□□□□ -0.9
SNRPD3-205ENST00000468770 ZNF652Q9Y2D9 606 aa9.45□□□□□ -0.9
SNRPD3-205ENST00000468770 NBPF26B4DH59 902 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 PDE6BP35913 854 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 TMPOP42166 694 aaKnown RBP9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 EIF4A1P60842 406 aaKnown RBP9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 LMOD3Q0VAK6 560 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 NEUROD2Q15784 382 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 NBPF10Q6P3W6 841 aaKnown RBP9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 CCDC146Q8IYE0 955 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 NBPF15Q8N660 670 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 TTLL6Q8N841 843 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 BRIP1Q9BX63 1249 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 PRKRIP1Q9H875 184 aaPredicted RBP9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 TSPYL4Q9UJ04 414 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 CARMIL3Q8ND23 1372 aa9.44□□□□□ -0.9
SNRPD3-205ENST00000468770 KIAA1551Q9HCM1 1747 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 ADCY9O60503 1353 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 ST5P78524 1137 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 C9orf131Q5VYM1 1079 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 PRR5LQ6MZQ0 368 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 CCDC24Q8N4L8 307 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 CNBD1Q8NA66 436 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 ZNF622Q969S3 477 aaKnown RBP eCLIP9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 RUNDC1Q96C34 613 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 DLG5Q8TDM6 1919 aa9.43□□□□□ -0.9
SNRPD3-205ENST00000468770 TPTE2Q6XPS3 522 aa9.42□□□□□ -0.9
SNRPD3-205ENST00000468770 NBPF5PQ86XG9 351 aaPredicted RBP9.42□□□□□ -0.9
SNRPD3-205ENST00000468770 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
SNRPD3-205ENST00000468770 NIP7Q9Y221 180 aaKnown RBP eCLIP9.42□□□□□ -0.9
SNRPD3-205ENST00000468770 AFDNP55196 1824 aaKnown RBP9.42□□□□□ -0.9
SNRPD3-205ENST00000468770 SENP3-EIF4A1A0A087X0R7 540 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms