RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 CYP19A1P11511 503 aaPredicted RBP25.63■■□□□ 1.69
LINC00888-201ENST00000468380 BCL2L12Q9HB09 334 aa25.63■■□□□ 1.69
LINC00888-201ENST00000468380 VEGFAP15692 232 aaPredicted RBP25.62■■□□□ 1.69
LINC00888-201ENST00000468380 LMNB1P20700 586 aa25.62■■□□□ 1.69
LINC00888-201ENST00000468380 SLC39A6Q13433 755 aa25.62■■□□□ 1.69
LINC00888-201ENST00000468380 NARFQ9UHQ1 456 aa25.62■■□□□ 1.69
LINC00888-201ENST00000468380 ZC3H4Q9UPT8 1303 aaKnown RBP25.62■■□□□ 1.69
LINC00888-201ENST00000468380 IL13P35225 146 aa25.61■■□□□ 1.69
LINC00888-201ENST00000468380 SLC52A2Q9HAB3 445 aa25.61■■□□□ 1.69
LINC00888-201ENST00000468380 POTECB2RU33 542 aa25.6■■□□□ 1.69
LINC00888-201ENST00000468380 AFDNP55196 1824 aaKnown RBP25.6■■□□□ 1.69
LINC00888-201ENST00000468380 SERPINB2P05120 415 aa25.59■■□□□ 1.69
LINC00888-201ENST00000468380 TTLL6Q8N841 843 aa25.59■■□□□ 1.69
LINC00888-201ENST00000468380 ZBTB1Q9Y2K1 713 aa25.59■■□□□ 1.69
LINC00888-201ENST00000468380 SCN11AQ9UI33 1791 aa25.59■■□□□ 1.69
LINC00888-201ENST00000468380 HSPA1AP0DMV8 641 aaKnown RBP25.58■■□□□ 1.69
LINC00888-201ENST00000468380 HSPA1BP0DMV9 641 aaKnown RBP25.58■■□□□ 1.69
LINC00888-201ENST00000468380 AKAP4Q5JQC9 854 aa25.58■■□□□ 1.69
LINC00888-201ENST00000468380 MORC1Q86VD1 984 aa25.58■■□□□ 1.69
LINC00888-201ENST00000468380 NFKBIEO00221 500 aa25.57■■□□□ 1.68
LINC00888-201ENST00000468380 C2CD5Q86YS7 1000 aa25.56■■□□□ 1.68
LINC00888-201ENST00000468380 NRXN2Q9P2S2 1712 aa25.56■■□□□ 1.68
LINC00888-201ENST00000468380 COL15A1P39059 1388 aa25.56■■□□□ 1.68
LINC00888-201ENST00000468380 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
LINC00888-201ENST00000468380 CARMIL3Q8ND23 1372 aa25.55■■□□□ 1.68
LINC00888-201ENST00000468380 TIMELESSQ9UNS1 1208 aa25.54■■□□□ 1.68
LINC00888-201ENST00000468380 CCDC88AQ3V6T2 1871 aa25.53■■□□□ 1.68
LINC00888-201ENST00000468380 H0YIN7 160 aa25.52■■□□□ 1.68
LINC00888-201ENST00000468380 BICDL1Q6ZP65 573 aa25.51■■□□□ 1.67
LINC00888-201ENST00000468380 HSPA5P11021 654 aaKnown RBP25.5■■□□□ 1.67
LINC00888-201ENST00000468380 CANXP27824 592 aaKnown RBP25.5■■□□□ 1.67
LINC00888-201ENST00000468380 DLEC1Q9Y238 1755 aa25.5■■□□□ 1.67
LINC00888-201ENST00000468380 MRC1P22897 1456 aa25.48■■□□□ 1.67
LINC00888-201ENST00000468380 HMOX1P09601 288 aa25.48■■□□□ 1.67
LINC00888-201ENST00000468380 VSIG10Q8N0Z9 540 aa25.48■■□□□ 1.67
LINC00888-201ENST00000468380 EIF5P55010 431 aaKnown RBP25.47■■□□□ 1.67
LINC00888-201ENST00000468380 MTHFSDQ2M296 383 aaKnown RBP25.47■■□□□ 1.67
LINC00888-201ENST00000468380 DPY19L2Q6NUT2 758 aa25.47■■□□□ 1.67
LINC00888-201ENST00000468380 CCDC24Q8N4L8 307 aa25.47■■□□□ 1.67
LINC00888-201ENST00000468380 ZNF219Q9P2Y4 722 aaPredicted RBP25.47■■□□□ 1.67
LINC00888-201ENST00000468380 TIAM2Q8IVF5 1701 aa25.46■■□□□ 1.67
LINC00888-201ENST00000468380 C21orf2O43822 256 aa25.46■■□□□ 1.67
LINC00888-201ENST00000468380 TBC1D9BQ66K14 1250 aa25.46■■□□□ 1.67
LINC00888-201ENST00000468380 ZNF622Q969S3 477 aaKnown RBP eCLIP25.46■■□□□ 1.67
LINC00888-201ENST00000468380 EIF4G2P78344 907 aaKnown RBP eCLIP25.45■■□□□ 1.66
LINC00888-201ENST00000468380 ERFEQ4G0M1 354 aa25.45■■□□□ 1.66
LINC00888-201ENST00000468380 POTEIP0CG38 1075 aa25.43■■□□□ 1.66
LINC00888-201ENST00000468380 POTEJP0CG39 1038 aa25.43■■□□□ 1.66
LINC00888-201ENST00000468380 BRIP1Q9BX63 1249 aa25.43■■□□□ 1.66
LINC00888-201ENST00000468380 KNSTRNQ9Y448 316 aa25.43■■□□□ 1.66
LINC00888-201ENST00000468380 ANKRD31Q8N7Z5 1873 aa25.42■■□□□ 1.66
LINC00888-201ENST00000468380 AMER1Q5JTC6 1135 aaPredicted RBP25.41■■□□□ 1.66
LINC00888-201ENST00000468380 PRR5LQ6MZQ0 368 aa25.41■■□□□ 1.66
LINC00888-201ENST00000468380 MKRN1Q9UHC7 482 aaKnown RBP25.41■■□□□ 1.66
LINC00888-201ENST00000468380 VIRMAQ69YN4 1812 aaKnown RBP25.4■■□□□ 1.66
LINC00888-201ENST00000468380 DDNO94850 711 aaPredicted RBP25.4■■□□□ 1.66
LINC00888-201ENST00000468380 STARD3NLO95772 234 aa25.4■■□□□ 1.66
LINC00888-201ENST00000468380 PDE6BP35913 854 aa25.4■■□□□ 1.66
LINC00888-201ENST00000468380 CHADLQ6NUI6 762 aa25.4■■□□□ 1.66
LINC00888-201ENST00000468380 CREBZFQ9NS37 354 aa25.4■■□□□ 1.66
LINC00888-201ENST00000468380 TBC1D2BQ9UPU7 963 aa25.4■■□□□ 1.66
LINC00888-201ENST00000468380 A0A087WZG4 1122 aa25.39■■□□□ 1.66
LINC00888-201ENST00000468380 TRIM26Q12899 539 aaPredicted RBP25.39■■□□□ 1.66
LINC00888-201ENST00000468380 ZNF496Q96IT1 587 aaPredicted RBP25.39■■□□□ 1.66
LINC00888-201ENST00000468380 FER1L6Q2WGJ9 1857 aa25.38■■□□□ 1.65
LINC00888-201ENST00000468380 PDZRN3Q9UPQ7 1066 aa25.38■■□□□ 1.65
LINC00888-201ENST00000468380 DICER1Q9UPY3 1922 aaKnown RBP25.37■■□□□ 1.65
LINC00888-201ENST00000468380 UBR2Q8IWV8 1755 aa25.37■■□□□ 1.65
LINC00888-201ENST00000468380 TTC5Q8N0Z6 440 aa25.36■■□□□ 1.65
LINC00888-201ENST00000468380 TAOK3Q9H2K8 898 aa25.36■■□□□ 1.65
LINC00888-201ENST00000468380 LTBP3Q9NS15 1303 aa25.36■■□□□ 1.65
LINC00888-201ENST00000468380 IL17REQ8NFR9 667 aa25.35■■□□□ 1.65
LINC00888-201ENST00000468380 COL11A2P13942 1736 aaPredicted RBP25.34■■□□□ 1.65
LINC00888-201ENST00000468380 FOXN1O15353 648 aa25.34■■□□□ 1.65
LINC00888-201ENST00000468380 ZNF790Q6PG37 636 aa25.34■■□□□ 1.65
LINC00888-201ENST00000468380 ZNF330Q9Y3S2 320 aaPredicted RBP25.34■■□□□ 1.65
LINC00888-201ENST00000468380 HEG1Q9ULI3 1381 aa25.33■■□□□ 1.65
LINC00888-201ENST00000468380 SLX4Q8IY92 1834 aa25.33■■□□□ 1.65
LINC00888-201ENST00000468380 A1BGP04217 495 aa25.33■■□□□ 1.65
LINC00888-201ENST00000468380 DIAPH1O60610 1272 aaKnown RBP25.32■■□□□ 1.64
LINC00888-201ENST00000468380 CAMTA2O94983 1202 aa25.32■■□□□ 1.64
LINC00888-201ENST00000468380 SRGNP10124 158 aa25.32■■□□□ 1.64
LINC00888-201ENST00000468380 IL6STP40189 918 aaPredicted RBP25.32■■□□□ 1.64
LINC00888-201ENST00000468380 PRPF40BQ6NWY9 871 aaKnown RBP25.32■■□□□ 1.64
LINC00888-201ENST00000468380 CNKSR1Q969H4 720 aa25.32■■□□□ 1.64
LINC00888-201ENST00000468380 PASKQ96RG2 1323 aa25.32■■□□□ 1.64
LINC00888-201ENST00000468380 STYK1Q6J9G0 422 aa25.31■■□□□ 1.64
LINC00888-201ENST00000468380 SETDB2Q96T68 719 aa25.31■■□□□ 1.64
LINC00888-201ENST00000468380 TEX13AQ9BXU3 409 aaPredicted RBP25.31■■□□□ 1.64
LINC00888-201ENST00000468380 CNTNAP1P78357 1384 aa25.31■■□□□ 1.64
LINC00888-201ENST00000468380 CNBD1Q8NA66 436 aa25.3■■□□□ 1.64
LINC00888-201ENST00000468380 C7orf43Q8WVR3 580 aa25.29■■□□□ 1.64
LINC00888-201ENST00000468380 KCNQ3O43525 872 aa25.28■■□□□ 1.64
LINC00888-201ENST00000468380 MASTLQ96GX5 879 aa25.28■■□□□ 1.64
LINC00888-201ENST00000468380 TAF1DQ9H5J8 278 aaPredicted RBP25.28■■□□□ 1.64
LINC00888-201ENST00000468380 SCN7AQ01118 1682 aa25.28■■□□□ 1.64
LINC00888-201ENST00000468380 CLSPNQ9HAW4 1339 aa25.28■■□□□ 1.64
LINC00888-201ENST00000468380 ITGBL1O95965 494 aaPredicted RBP25.27■■□□□ 1.64
LINC00888-201ENST00000468380 TEFQ10587 303 aa25.27■■□□□ 1.64
LINC00888-201ENST00000468380 LDHDQ86WU2 507 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms