RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 FCHSD2O94868 740 aa13.85□□□□□ -0.19
SSR3-205ENST00000467789 TEFQ10587 303 aa13.85□□□□□ -0.19
SSR3-205ENST00000467789 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
SSR3-205ENST00000467789 GOLGB1Q14789 3259 aaKnown RBP13.84□□□□□ -0.19
SSR3-205ENST00000467789 PRKAR2BP31323 418 aa13.84□□□□□ -0.19
SSR3-205ENST00000467789 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
SSR3-205ENST00000467789 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
SSR3-205ENST00000467789 MIER1Q8N108 512 aa13.84□□□□□ -0.19
SSR3-205ENST00000467789 PLCD3Q8N3E9 789 aa13.84□□□□□ -0.19
SSR3-205ENST00000467789 KCPQ6ZWJ8 1503 aa13.84□□□□□ -0.19
SSR3-205ENST00000467789 SIPA1L3O60292 1781 aaPredicted RBP13.83□□□□□ -0.19
SSR3-205ENST00000467789 KIF13BQ9NQT8 1826 aa13.83□□□□□ -0.2
SSR3-205ENST00000467789 MMP10P09238 476 aa13.83□□□□□ -0.2
SSR3-205ENST00000467789 U2AF1L5P0DN76 240 aaPredicted RBP13.83□□□□□ -0.2
SSR3-205ENST00000467789 GYS1P13807 737 aa13.83□□□□□ -0.2
SSR3-205ENST00000467789 U2AF1Q01081 240 aaKnown RBP eCLIP13.83□□□□□ -0.22e-12■■■■□ 19.4
SSR3-205ENST00000467789 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
SSR3-205ENST00000467789 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
SSR3-205ENST00000467789 ZBTB47Q9UFB7 747 aaPredicted RBP13.83□□□□□ -0.2
SSR3-205ENST00000467789 CEMIPQ8WUJ3 1361 aa13.83□□□□□ -0.2
SSR3-205ENST00000467789 FXR2P51116 673 aaKnown RBP eCLIP13.82□□□□□ -0.2
SSR3-205ENST00000467789 SLC39A6Q13433 755 aa13.82□□□□□ -0.2
SSR3-205ENST00000467789 INTS5Q6P9B9 1019 aaKnown RBP13.82□□□□□ -0.2
SSR3-205ENST00000467789 DNAJC10Q8IXB1 793 aa13.82□□□□□ -0.2
SSR3-205ENST00000467789 IL17REQ8NFR9 667 aa13.82□□□□□ -0.2
SSR3-205ENST00000467789 TEX13AQ9BXU3 409 aaPredicted RBP13.82□□□□□ -0.2
SSR3-205ENST00000467789 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
SSR3-205ENST00000467789 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
SSR3-205ENST00000467789 TGFB2P61812 414 aa13.81□□□□□ -0.2
SSR3-205ENST00000467789 ZNF790Q6PG37 636 aa13.81□□□□□ -0.2
SSR3-205ENST00000467789 PHACTR3Q96KR7 559 aa13.81□□□□□ -0.2
SSR3-205ENST00000467789 PARP3Q9Y6F1 533 aa13.81□□□□□ -0.2
SSR3-205ENST00000467789 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
SSR3-205ENST00000467789 STARD3NLO95772 234 aa13.8□□□□□ -0.2
SSR3-205ENST00000467789 NEFMP07197 916 aa13.8□□□□□ -0.2
SSR3-205ENST00000467789 YBX3P16989 372 aaKnown RBP eCLIP13.8□□□□□ -0.2
SSR3-205ENST00000467789 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
SSR3-205ENST00000467789 ZPR1O75312 459 aa13.79□□□□□ -0.2
SSR3-205ENST00000467789 ZNF784Q8NCA9 323 aaPredicted RBP13.79□□□□□ -0.2
SSR3-205ENST00000467789 PNNQ9H307 717 aaKnown RBP13.79□□□□□ -0.2
SSR3-205ENST00000467789 SOS1Q07889 1333 aaPredicted RBP13.79□□□□□ -0.2
SSR3-205ENST00000467789 HEG1Q9ULI3 1381 aa13.79□□□□□ -0.2
SSR3-205ENST00000467789 C10orf71Q711Q0 1435 aa13.79□□□□□ -0.2
SSR3-205ENST00000467789 RALBP1Q15311 655 aa13.78□□□□□ -0.2
SSR3-205ENST00000467789 FMNL2Q96PY5 1086 aa13.78□□□□□ -0.2
SSR3-205ENST00000467789 COL15A1P39059 1388 aa13.78□□□□□ -0.2
SSR3-205ENST00000467789 ZNF496Q96IT1 587 aaPredicted RBP13.77□□□□□ -0.21
SSR3-205ENST00000467789 NARFQ9UHQ1 456 aa13.77□□□□□ -0.21
SSR3-205ENST00000467789 KIAA1551Q9HCM1 1747 aa13.76□□□□□ -0.21
SSR3-205ENST00000467789 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
SSR3-205ENST00000467789 A0A087WZG4 1122 aa13.76□□□□□ -0.21
SSR3-205ENST00000467789 BTBD11A6QL63 1104 aa13.76□□□□□ -0.21
SSR3-205ENST00000467789 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
SSR3-205ENST00000467789 ZBTB1Q9Y2K1 713 aa13.76□□□□□ -0.21
SSR3-205ENST00000467789 TM4SF1P30408 202 aa13.75□□□□□ -0.21
SSR3-205ENST00000467789 USPL1Q5W0Q7 1092 aa13.75□□□□□ -0.21
SSR3-205ENST00000467789 N4BP2Q86UW6 1770 aaPredicted RBP13.74□□□□□ -0.21
SSR3-205ENST00000467789 IL6STP40189 918 aaPredicted RBP13.74□□□□□ -0.21
SSR3-205ENST00000467789 EIF5P55010 431 aaKnown RBP13.74□□□□□ -0.21
SSR3-205ENST00000467789 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
SSR3-205ENST00000467789 CREBZFQ9NS37 354 aa13.74□□□□□ -0.21
SSR3-205ENST00000467789 BRCA1P38398 1863 aaKnown RBP13.74□□□□□ -0.21
SSR3-205ENST00000467789 POLRMTO00411 1230 aaKnown RBP13.73□□□□□ -0.21
SSR3-205ENST00000467789 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
SSR3-205ENST00000467789 DLG5Q8TDM6 1919 aa13.72□□□□□ -0.21
SSR3-205ENST00000467789 CANXP27824 592 aaKnown RBP13.72□□□□□ -0.21
SSR3-205ENST00000467789 DDR1Q08345 913 aa13.72□□□□□ -0.21
SSR3-205ENST00000467789 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
SSR3-205ENST00000467789 MCM10Q7L590 875 aa13.72□□□□□ -0.21
SSR3-205ENST00000467789 PLEKHF1Q96S99 279 aa13.72□□□□□ -0.21
SSR3-205ENST00000467789 NRXN2Q9P2S2 1712 aa13.72□□□□□ -0.21
SSR3-205ENST00000467789 MAPK8IP3Q9UPT6 1336 aa13.71□□□□□ -0.21
SSR3-205ENST00000467789 A0A0G2JLW4 131 aa13.71□□□□□ -0.21
SSR3-205ENST00000467789 SNRPA1P09661 255 aaKnown RBP13.71□□□□□ -0.21
SSR3-205ENST00000467789 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
SSR3-205ENST00000467789 DDX10Q13206 875 aaKnown RBP13.71□□□□□ -0.21
SSR3-205ENST00000467789 PNISRQ8TF01 805 aaKnown RBP13.71□□□□□ -0.21
SSR3-205ENST00000467789 ARFGEF1Q9Y6D6 1849 aa13.71□□□□□ -0.22
SSR3-205ENST00000467789 MYBBP1AQ9BQG0 1328 aaKnown RBP13.7□□□□□ -0.22
SSR3-205ENST00000467789 SCN7AQ01118 1682 aa13.7□□□□□ -0.22
SSR3-205ENST00000467789 AFDNP55196 1824 aaKnown RBP13.7□□□□□ -0.22
SSR3-205ENST00000467789 DPEP1P16444 411 aa13.7□□□□□ -0.22
SSR3-205ENST00000467789 NFIXQ14938 502 aa13.7□□□□□ -0.22
SSR3-205ENST00000467789 NFE2L2Q16236 605 aa13.7□□□□□ -0.22
SSR3-205ENST00000467789 PIM2Q9P1W9 311 aa13.7□□□□□ -0.22
SSR3-205ENST00000467789 ADCY9O60503 1353 aa13.7□□□□□ -0.22
SSR3-205ENST00000467789 BCL2L12Q9HB09 334 aa13.69□□□□□ -0.22
SSR3-205ENST00000467789 BCS1LQ9Y276 419 aa13.69□□□□□ -0.22
SSR3-205ENST00000467789 RGL2O15211 777 aa13.68□□□□□ -0.22
SSR3-205ENST00000467789 KCNQ3O43525 872 aa13.68□□□□□ -0.22
SSR3-205ENST00000467789 SERPINB2P05120 415 aa13.68□□□□□ -0.22
SSR3-205ENST00000467789 KCNA3P22001 575 aa13.68□□□□□ -0.22
SSR3-205ENST00000467789 DCTN1Q14203 1278 aa13.68□□□□□ -0.22
SSR3-205ENST00000467789 PDZRN3Q9UPQ7 1066 aa13.68□□□□□ -0.22
SSR3-205ENST00000467789 ATP10DQ9P241 1426 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 GIGYF1O75420 1035 aaPredicted RBP13.67□□□□□ -0.22
SSR3-205ENST00000467789 A1BGP04217 495 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 DALRD3Q5D0E6 543 aaKnown RBP13.67□□□□□ -0.22
SSR3-205ENST00000467789 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
SSR3-205ENST00000467789 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms