RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 FYB1O15117 783 aa9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 RAD21O60216 631 aa9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 HSPA1AP0DMV8 641 aaKnown RBP9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 HSPA1BP0DMV9 641 aaKnown RBP9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 NCLP19338 710 aaKnown RBP9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 ATP6V1AP38606 617 aa9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 FSTL1Q12841 308 aa9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 YTHDC1Q96MU7 727 aaKnown RBP9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 C4AP0C0L4 1744 aa9.67□□□□□ -0.86
RPUSD3-212ENST00000466141 INSRP06213 1382 aa9.66□□□□□ -0.86
RPUSD3-212ENST00000466141 WASHC2AQ641Q2 1341 aa9.66□□□□□ -0.86
RPUSD3-212ENST00000466141 KCNA3P22001 575 aa9.66□□□□□ -0.86
RPUSD3-212ENST00000466141 HMGB2P26583 209 aaKnown RBP9.66□□□□□ -0.86
RPUSD3-212ENST00000466141 C1orf115Q9H7X2 142 aa9.66□□□□□ -0.86
RPUSD3-212ENST00000466141 RNF181Q9P0P0 153 aa9.66□□□□□ -0.86
RPUSD3-212ENST00000466141 PLEKHG2Q9H7P9 1386 aa9.65□□□□□ -0.86
RPUSD3-212ENST00000466141 NKX1-1Q15270 411 aaPredicted RBP9.65□□□□□ -0.86
RPUSD3-212ENST00000466141 ATG3Q9NT62 314 aa9.65□□□□□ -0.86
RPUSD3-212ENST00000466141 TMOD3Q9NYL9 352 aa9.65□□□□□ -0.86
RPUSD3-212ENST00000466141 FLT4P35916 1363 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 KDM2BQ8NHM5 1336 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 ARFGEF1Q9Y6D6 1849 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 GYS1P13807 737 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 TRAPPC3LQ5T215 181 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 ARHGEF1Q92888 912 aaKnown RBP9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 DCAF5Q96JK2 942 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 SLC4A9Q96Q91 983 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 PANK3Q9H999 370 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 CCDC87Q9NVE4 849 aa9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 TNRC6CQ9HCJ0 1690 aaKnown RBP9.64□□□□□ -0.87
RPUSD3-212ENST00000466141 KDRP35968 1356 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 KIF24Q5T7B8 1368 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 CHRNA5P30532 468 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 RASSF7Q02833 373 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 TEX2Q8IWB9 1127 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 NLGN1Q8N2Q7 840 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 SMC1BQ8NDV3 1235 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 NAP1L2Q9ULW6 460 aaPredicted RBP9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 RTCBQ9Y3I0 505 aaKnown RBP9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 EMILIN1Q9Y6C2 1016 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 PARP3Q9Y6F1 533 aa9.63□□□□□ -0.87
RPUSD3-212ENST00000466141 IPO4Q8TEX9 1081 aaKnown RBP9.62□□□□□ -0.87
RPUSD3-212ENST00000466141 PIM2Q9P1W9 311 aa9.62□□□□□ -0.87
RPUSD3-212ENST00000466141 SPG7Q9UQ90 795 aa9.62□□□□□ -0.87
RPUSD3-212ENST00000466141 NCAPD2Q15021 1401 aa9.62□□□□□ -0.87
RPUSD3-212ENST00000466141 CHRM1P11229 460 aaPredicted RBP9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 PHKG2P15735 406 aa9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 RFC4P35249 363 aa9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 DDR1Q08345 913 aa9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 DALRD3Q5D0E6 543 aaKnown RBP9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 RGS22Q8NE09 1264 aa9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 RBM42Q9BTD8 480 aaKnown RBP9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 SRP68Q9UHB9 627 aaKnown RBP9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 COL5A3P25940 1745 aaPredicted RBP9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 SBF1O95248 1867 aa9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 NPC1L1Q9UHC9 1359 aa9.61□□□□□ -0.87
RPUSD3-212ENST00000466141 PPM1GO15355 546 aaPredicted RBP9.6□□□□□ -0.87
RPUSD3-212ENST00000466141 PER1O15534 1290 aaPredicted RBP9.59□□□□□ -0.87
RPUSD3-212ENST00000466141 RPS6KA4O75676 772 aa9.59□□□□□ -0.87
RPUSD3-212ENST00000466141 IFNL2Q8IZJ0 200 aa9.59□□□□□ -0.87
RPUSD3-212ENST00000466141 PSMD1Q99460 953 aa9.59□□□□□ -0.87
RPUSD3-212ENST00000466141 EYA1Q99502 592 aa9.59□□□□□ -0.87
RPUSD3-212ENST00000466141 MYH14Q7Z406 1995 aaKnown RBP9.59□□□□□ -0.87
RPUSD3-212ENST00000466141 CNTNAP4Q9C0A0 1308 aa9.58□□□□□ -0.88
RPUSD3-212ENST00000466141 PTMSP20962 102 aa9.58□□□□□ -0.88
RPUSD3-212ENST00000466141 IRX6P78412 446 aaPredicted RBP9.58□□□□□ -0.88
RPUSD3-212ENST00000466141 RC3H1Q5TC82 1133 aaKnown RBP9.58□□□□□ -0.88
RPUSD3-212ENST00000466141 COL3A1P02461 1466 aaPredicted RBP9.58□□□□□ -0.88
RPUSD3-212ENST00000466141 KDM6AO15550 1401 aaPredicted RBP9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 TIAM2Q8IVF5 1701 aa9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 VIRMAQ69YN4 1812 aaKnown RBP9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 VEGFAP15692 232 aaPredicted RBP9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 ZNF592Q92610 1267 aa9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 MKRN1Q9UHC7 482 aaKnown RBP9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 KNSTRNQ9Y448 316 aa9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 ZNF831Q5JPB2 1677 aa9.57□□□□□ -0.88
RPUSD3-212ENST00000466141 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 GLTPD2A6NH11 291 aa9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 POTECB2RU33 542 aa9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 POLRMTO00411 1230 aaKnown RBP9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 PTCD1O75127 700 aaKnown RBP9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 MYCNP04198 464 aaPredicted RBP9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 RBM25P49756 843 aaKnown RBP9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 POLKQ9UBT6 870 aa9.56□□□□□ -0.88
RPUSD3-212ENST00000466141 FOXN1O15353 648 aa9.55□□□□□ -0.88
RPUSD3-212ENST00000466141 CRKLP46109 303 aaKnown RBP9.55□□□□□ -0.88
RPUSD3-212ENST00000466141 MTMR7Q9Y216 660 aa9.55□□□□□ -0.88
RPUSD3-212ENST00000466141 ADAMTS7Q9UKP4 1686 aa9.55□□□□□ -0.88
RPUSD3-212ENST00000466141 TJP1Q07157 1748 aa9.54□□□□□ -0.88
RPUSD3-212ENST00000466141 POTEIP0CG38 1075 aa9.54□□□□□ -0.88
RPUSD3-212ENST00000466141 POTEJP0CG39 1038 aa9.54□□□□□ -0.88
RPUSD3-212ENST00000466141 LMNB1P20700 586 aa9.54□□□□□ -0.88
RPUSD3-212ENST00000466141 ZC3H4Q9UPT8 1303 aaKnown RBP9.54□□□□□ -0.88
RPUSD3-212ENST00000466141 ERVV-2B6SEH9 535 aa9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 APBB1O00213 710 aa9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 NFKBIEO00221 500 aa9.53□□□□□ -0.88
RPUSD3-212ENST00000466141 RGL2O15211 777 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 614.9 ms