RNA–Protein interactions for RNA: ENST00000465896.5

PHC3-201, Transcript of polyhomeotic homolog 3, humanhuman

TSL 5

Gene PHC3, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-201ENST00000465896 RASSF7Q02833 373 aa16.71■□□□□ 0.27
PHC3-201ENST00000465896 SLC39A6Q13433 755 aa16.71■□□□□ 0.27
PHC3-201ENST00000465896 DALRD3Q5D0E6 543 aaKnown RBP16.71■□□□□ 0.27
PHC3-201ENST00000465896 USPL1Q5W0Q7 1092 aa16.71■□□□□ 0.27
PHC3-201ENST00000465896 JMYQ8N9B5 988 aa16.71■□□□□ 0.27
PHC3-201ENST00000465896 RNF181Q9P0P0 153 aa16.71■□□□□ 0.27
PHC3-201ENST00000465896 SIPA1L3O60292 1781 aaPredicted RBP16.7■□□□□ 0.26
PHC3-201ENST00000465896 NFIXQ14938 502 aa16.7■□□□□ 0.26
PHC3-201ENST00000465896 RRAGCQ9HB90 399 aa16.7■□□□□ 0.26
PHC3-201ENST00000465896 AMER1Q5JTC6 1135 aaPredicted RBP16.69■□□□□ 0.26
PHC3-201ENST00000465896 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
PHC3-201ENST00000465896 KLRG1Q96E93 195 aa16.69■□□□□ 0.26
PHC3-201ENST00000465896 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
PHC3-201ENST00000465896 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
PHC3-201ENST00000465896 COL13A1Q5TAT6 717 aaPredicted RBP16.68■□□□□ 0.26
PHC3-201ENST00000465896 MORC1Q86VD1 984 aa16.68■□□□□ 0.26
PHC3-201ENST00000465896 SCN7AQ01118 1682 aa16.68■□□□□ 0.26
PHC3-201ENST00000465896 COL15A1P39059 1388 aa16.67■□□□□ 0.26
PHC3-201ENST00000465896 RNMTO43148 476 aaKnown RBP16.67■□□□□ 0.26
PHC3-201ENST00000465896 FSTL1Q12841 308 aa16.67■□□□□ 0.26
PHC3-201ENST00000465896 AKAP4Q5JQC9 854 aa16.67■□□□□ 0.26
PHC3-201ENST00000465896 FER1L6Q2WGJ9 1857 aa16.67■□□□□ 0.26
PHC3-201ENST00000465896 DICER1Q9UPY3 1922 aaKnown RBP16.66■□□□□ 0.26
PHC3-201ENST00000465896 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
PHC3-201ENST00000465896 POTECB2RU33 542 aa16.65■□□□□ 0.26
PHC3-201ENST00000465896 NFKBIEO00221 500 aa16.65■□□□□ 0.26
PHC3-201ENST00000465896 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
PHC3-201ENST00000465896 COL3A1P02461 1466 aaPredicted RBP16.65■□□□□ 0.26
PHC3-201ENST00000465896 MTHFSDQ2M296 383 aaKnown RBP16.64■□□□□ 0.25
PHC3-201ENST00000465896 KDM2BQ8NHM5 1336 aa16.64■□□□□ 0.25
PHC3-201ENST00000465896 CLSPNQ9HAW4 1339 aa16.64■□□□□ 0.25
PHC3-201ENST00000465896 CACNA1SQ13698 1873 aa16.63■□□□□ 0.25
PHC3-201ENST00000465896 HMOX1P09601 288 aa16.63■□□□□ 0.25
PHC3-201ENST00000465896 ZPR1O75312 459 aa16.62■□□□□ 0.25
PHC3-201ENST00000465896 SERPINB2P05120 415 aa16.62■□□□□ 0.25
PHC3-201ENST00000465896 BCORQ6W2J9 1755 aa16.61■□□□□ 0.25
PHC3-201ENST00000465896 ARFGEF2Q9Y6D5 1785 aa16.61■□□□□ 0.25
PHC3-201ENST00000465896 SLX4Q8IY92 1834 aa16.61■□□□□ 0.25
PHC3-201ENST00000465896 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
PHC3-201ENST00000465896 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
PHC3-201ENST00000465896 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
PHC3-201ENST00000465896 C16orf71Q8IYS4 520 aaPredicted RBP16.6■□□□□ 0.25
PHC3-201ENST00000465896 ZC3H4Q9UPT8 1303 aaKnown RBP16.6■□□□□ 0.25
PHC3-201ENST00000465896 LMNB1P20700 586 aa16.59■□□□□ 0.25
PHC3-201ENST00000465896 C2CD5Q86YS7 1000 aa16.59■□□□□ 0.25
PHC3-201ENST00000465896 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
PHC3-201ENST00000465896 CANXP27824 592 aaKnown RBP16.58■□□□□ 0.24
PHC3-201ENST00000465896 TBC1D9BQ66K14 1250 aa16.58■□□□□ 0.24
PHC3-201ENST00000465896 CCDC24Q8N4L8 307 aa16.58■□□□□ 0.24
PHC3-201ENST00000465896 TTLL6Q8N841 843 aa16.58■□□□□ 0.24
PHC3-201ENST00000465896 SMC1BQ8NDV3 1235 aa16.58■□□□□ 0.24
PHC3-201ENST00000465896 PCGF6Q9BYE7 350 aa16.58■□□□□ 0.24
PHC3-201ENST00000465896 KNSTRNQ9Y448 316 aa16.58■□□□□ 0.24
PHC3-201ENST00000465896 KIF7Q2M1P5 1343 aa16.58■□□□□ 0.24
PHC3-201ENST00000465896 IL17REQ8NFR9 667 aa16.57■□□□□ 0.24
PHC3-201ENST00000465896 ZNF496Q96IT1 587 aaPredicted RBP16.57■□□□□ 0.24
PHC3-201ENST00000465896 BICDL1Q6ZP65 573 aa16.56■□□□□ 0.24
PHC3-201ENST00000465896 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
PHC3-201ENST00000465896 VEGFAP15692 232 aaPredicted RBP16.55■□□□□ 0.24
PHC3-201ENST00000465896 PRR5LQ6MZQ0 368 aa16.55■□□□□ 0.24
PHC3-201ENST00000465896 KCNQ3O43525 872 aa16.54■□□□□ 0.24
PHC3-201ENST00000465896 POTEIP0CG38 1075 aa16.54■□□□□ 0.24
PHC3-201ENST00000465896 POTEJP0CG39 1038 aa16.54■□□□□ 0.24
PHC3-201ENST00000465896 H0YIN7 160 aa16.52■□□□□ 0.24
PHC3-201ENST00000465896 C21orf2O43822 256 aa16.52■□□□□ 0.24
PHC3-201ENST00000465896 DIAPH1O60610 1272 aaKnown RBP16.52■□□□□ 0.24
PHC3-201ENST00000465896 CAMTA2O94983 1202 aa16.52■□□□□ 0.24
PHC3-201ENST00000465896 TBC1D2BQ9UPU7 963 aa16.52■□□□□ 0.24
PHC3-201ENST00000465896 CEMIPQ8WUJ3 1361 aa16.51■□□□□ 0.23
PHC3-201ENST00000465896 A1BGP04217 495 aa16.51■□□□□ 0.23
PHC3-201ENST00000465896 HSPA1AP0DMV8 641 aaKnown RBP16.51■□□□□ 0.23
PHC3-201ENST00000465896 HSPA1BP0DMV9 641 aaKnown RBP16.51■□□□□ 0.23
PHC3-201ENST00000465896 CC2D1BQ5T0F9 858 aaKnown RBP16.51■□□□□ 0.23
PHC3-201ENST00000465896 ZNF790Q6PG37 636 aa16.51■□□□□ 0.23
PHC3-201ENST00000465896 BRIP1Q9BX63 1249 aa16.51■□□□□ 0.23
PHC3-201ENST00000465896 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
PHC3-201ENST00000465896 PRAMEF22A3QJZ6 481 aa16.5■□□□□ 0.23
PHC3-201ENST00000465896 CAPN15O75808 1086 aa16.5■□□□□ 0.23
PHC3-201ENST00000465896 ADAMTSL1Q8N6G6 1762 aa16.5■□□□□ 0.23
PHC3-201ENST00000465896 LTBP3Q9NS15 1303 aa16.49■□□□□ 0.23
PHC3-201ENST00000465896 ZNF622Q969S3 477 aaKnown RBP eCLIP16.49■□□□□ 0.239e-8■■□□□ 12.4
PHC3-201ENST00000465896 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
PHC3-201ENST00000465896 STARD3NLO95772 234 aa16.48■□□□□ 0.23
PHC3-201ENST00000465896 IL6STP40189 918 aaPredicted RBP16.48■□□□□ 0.23
PHC3-201ENST00000465896 PIP4K2AP48426 406 aaPredicted RBP16.48■□□□□ 0.23
PHC3-201ENST00000465896 TNS4Q8IZW8 715 aa16.48■□□□□ 0.23
PHC3-201ENST00000465896 C7orf43Q8WVR3 580 aa16.48■□□□□ 0.23
PHC3-201ENST00000465896 A0A087WZG4 1122 aa16.47■□□□□ 0.23
PHC3-201ENST00000465896 DDNO94850 711 aaPredicted RBP16.47■□□□□ 0.23
PHC3-201ENST00000465896 SRGNP10124 158 aa16.47■□□□□ 0.23
PHC3-201ENST00000465896 ERFEQ4G0M1 354 aa16.47■□□□□ 0.23
PHC3-201ENST00000465896 SCN4AP35499 1836 aa16.47■□□□□ 0.23
PHC3-201ENST00000465896 GNAT3A8MTJ3 354 aa16.46■□□□□ 0.23
PHC3-201ENST00000465896 PDE6BP35913 854 aa16.46■□□□□ 0.23
PHC3-201ENST00000465896 TTC5Q8N0Z6 440 aa16.46■□□□□ 0.23
PHC3-201ENST00000465896 USP16Q9Y5T5 823 aa16.46■□□□□ 0.23
PHC3-201ENST00000465896 NPC1L1Q9UHC9 1359 aa16.46■□□□□ 0.23
PHC3-201ENST00000465896 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
PHC3-201ENST00000465896 PRPF40BQ6NWY9 871 aaKnown RBP16.45■□□□□ 0.22
PHC3-201ENST00000465896 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms