RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 SBNO1A3KN83 1393 aa13.77□□□□□ -0.2
CCDC115-204ENST00000465315 AK9Q5TCS8 1911 aa13.77□□□□□ -0.2
CCDC115-204ENST00000465315 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.2
CCDC115-204ENST00000465315 AACSQ86V21 672 aa13.77□□□□□ -0.2
CCDC115-204ENST00000465315 CCDC83Q8IWF9 413 aa13.77□□□□□ -0.2
CCDC115-204ENST00000465315 JAKMIP1Q96N16 626 aaKnown RBP13.77□□□□□ -0.2
CCDC115-204ENST00000465315 CCDC8Q9H0W5 538 aaPredicted RBP13.77□□□□□ -0.2
CCDC115-204ENST00000465315 TMEM63CQ9P1W3 806 aa13.77□□□□□ -0.2
CCDC115-204ENST00000465315 MBD3O95983 291 aa13.77□□□□□ -0.21
CCDC115-204ENST00000465315 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.21
CCDC115-204ENST00000465315 GOLGA6L4A6NEF3 574 aa13.77□□□□□ -0.21
CCDC115-204ENST00000465315 ZC3H6P61129 1189 aaKnown RBP13.77□□□□□ -0.21
CCDC115-204ENST00000465315 G3BP1Q13283 466 aaKnown RBP eCLIP13.77□□□□□ -0.21
CCDC115-204ENST00000465315 CWF19L2Q2TBE0 894 aaKnown RBP13.77□□□□□ -0.21
CCDC115-204ENST00000465315 TCEANC2Q96MN5 208 aa13.77□□□□□ -0.21
CCDC115-204ENST00000465315 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.21
CCDC115-204ENST00000465315 RIC3Q7Z5B4 369 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 PKNOX2Q96KN3 472 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 FAM13BQ9NYF5 915 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
CCDC115-204ENST00000465315 FOSBP53539 338 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 FERMT3Q86UX7 667 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 TSPY26PQ9H489 355 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 STK3Q13188 491 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 NBPF6Q5VWK0 638 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 SIRT1Q96EB6 747 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 NBPF4Q96M43 638 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 MAP3K2Q9Y2U5 619 aa13.76□□□□□ -0.21
CCDC115-204ENST00000465315 PLEKHO1Q53GL0 409 aaPredicted RBP13.75□□□□□ -0.21
CCDC115-204ENST00000465315 NLRP2Q9NX02 1062 aa13.75□□□□□ -0.21
CCDC115-204ENST00000465315 ZDHHC9Q9Y397 364 aa13.75□□□□□ -0.21
CCDC115-204ENST00000465315 MAP3K5Q99683 1374 aa13.75□□□□□ -0.21
CCDC115-204ENST00000465315 NCOA3Q9Y6Q9 1424 aa13.75□□□□□ -0.21
CCDC115-204ENST00000465315 RUFY2Q8WXA3 655 aa13.75□□□□□ -0.21
CCDC115-204ENST00000465315 SOS1Q07889 1333 aaPredicted RBP13.75□□□□□ -0.21
CCDC115-204ENST00000465315 WDR33Q9C0J8 1336 aaKnown RBP13.75□□□□□ -0.21
CCDC115-204ENST00000465315 GADD45BO75293 160 aaPredicted RBP13.75□□□□□ -0.21
CCDC115-204ENST00000465315 ZKSCAN1P17029 563 aaPredicted RBP13.75□□□□□ -0.21
CCDC115-204ENST00000465315 BOLA2Q9H3K6 86 aa13.75□□□□□ -0.21
CCDC115-204ENST00000465315 HSP90AB4PQ58FF6 505 aa13.74□□□□□ -0.21
CCDC115-204ENST00000465315 FSD1Q9BTV5 496 aa13.74□□□□□ -0.21
CCDC115-204ENST00000465315 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
CCDC115-204ENST00000465315 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
CCDC115-204ENST00000465315 IGSF1Q8N6C5 1336 aa13.74□□□□□ -0.21
CCDC115-204ENST00000465315 ARHGEF10O15013 1369 aa13.74□□□□□ -0.21
CCDC115-204ENST00000465315 KIF20BQ96Q89 1820 aa13.74□□□□□ -0.21
CCDC115-204ENST00000465315 SLC39A6Q13433 755 aa13.73□□□□□ -0.21
CCDC115-204ENST00000465315 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
CCDC115-204ENST00000465315 NECAB1Q8N987 351 aa13.73□□□□□ -0.21
CCDC115-204ENST00000465315 CRB1P82279 1406 aa13.73□□□□□ -0.21
CCDC115-204ENST00000465315 IL25Q9H293 177 aa13.73□□□□□ -0.21
CCDC115-204ENST00000465315 SETD1BQ9UPS6 1966 aaKnown RBP13.73□□□□□ -0.21
CCDC115-204ENST00000465315 RAB11FIP3O75154 756 aa13.73□□□□□ -0.21
CCDC115-204ENST00000465315 PHF14O94880 888 aa13.73□□□□□ -0.21
CCDC115-204ENST00000465315 HSP90B1P14625 803 aaKnown RBP13.73□□□□□ -0.21
CCDC115-204ENST00000465315 LRSAM1Q6UWE0 723 aa13.73□□□□□ -0.21
CCDC115-204ENST00000465315 AK2P54819 239 aa13.72□□□□□ -0.21
CCDC115-204ENST00000465315 ZNF830Q96NB3 372 aaPredicted RBP13.72□□□□□ -0.21
CCDC115-204ENST00000465315 PDRG1Q9NUG6 133 aa13.72□□□□□ -0.21
CCDC115-204ENST00000465315 TBX22Q9Y458 520 aa13.72□□□□□ -0.21
CCDC115-204ENST00000465315 PRAMEF22A3QJZ6 481 aa13.72□□□□□ -0.21
CCDC115-204ENST00000465315 KLHDC4Q8TBB5 520 aa13.72□□□□□ -0.21
CCDC115-204ENST00000465315 OSBPL3Q9H4L5 887 aa13.72□□□□□ -0.21
CCDC115-204ENST00000465315 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
CCDC115-204ENST00000465315 GLRX3O76003 335 aaKnown RBP13.71□□□□□ -0.21
CCDC115-204ENST00000465315 KIAA2012Q0VF49 1180 aa13.71□□□□□ -0.21
CCDC115-204ENST00000465315 USP25Q9UHP3 1055 aa13.71□□□□□ -0.21
CCDC115-204ENST00000465315 IBTKQ9P2D0 1353 aaPredicted RBP13.71□□□□□ -0.21
CCDC115-204ENST00000465315 ZNF445P59923 1031 aa13.71□□□□□ -0.21
CCDC115-204ENST00000465315 NEXNQ0ZGT2 675 aa13.71□□□□□ -0.21
CCDC115-204ENST00000465315 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.21
CCDC115-204ENST00000465315 RGS12O14924 1447 aa13.71□□□□□ -0.21
CCDC115-204ENST00000465315 RIMS1Q86UR5 1692 aaKnown RBP13.71□□□□□ -0.22
CCDC115-204ENST00000465315 HTATSF1O43719 755 aaKnown RBP13.71□□□□□ -0.22
CCDC115-204ENST00000465315 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.71□□□□□ -0.22
CCDC115-204ENST00000465315 RASEFQ8IZ41 740 aa13.71□□□□□ -0.22
CCDC115-204ENST00000465315 DNAJC2Q99543 621 aaKnown RBP13.71□□□□□ -0.22
CCDC115-204ENST00000465315 CHMP4AQ9BY43 222 aa13.71□□□□□ -0.22
CCDC115-204ENST00000465315 DBF4Q9UBU7 674 aaPredicted RBP13.71□□□□□ -0.22
CCDC115-204ENST00000465315 CDC42BPGQ6DT37 1551 aa13.71□□□□□ -0.22
CCDC115-204ENST00000465315 DDX58O95786 925 aaKnown RBP13.7□□□□□ -0.22
CCDC115-204ENST00000465315 DRC7Q8IY82 874 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 LIMCH1Q9UPQ0 1083 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 A0A0G2JS52 829 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 PPFIA3O75145 1194 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 DLC1Q96QB1 1528 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
CCDC115-204ENST00000465315 PROSER3Q2NL68 480 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
CCDC115-204ENST00000465315 STX6O43752 255 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 BRD1O95696 1058 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 HCLS1P14317 486 aaPredicted RBP13.69□□□□□ -0.22
CCDC115-204ENST00000465315 ANAPC15P60006 121 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 SPC24Q8NBT2 197 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 SSH3Q8TE77 659 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 ATP6V1DQ9Y5K8 247 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 GJB2P29033 226 aa13.69□□□□□ -0.22
CCDC115-204ENST00000465315 FER1L4A9Z1Z3 1794 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms