RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 ATXN7O15265 892 aaPredicted RBP6.9□□□□□ -1.3
GARNL3-213ENST00000464616 GSK3AP49840 483 aa6.9□□□□□ -1.3
GARNL3-213ENST00000464616 DEPDC4Q8N2C3 294 aa6.9□□□□□ -1.3
GARNL3-213ENST00000464616 NFATC2IPQ8NCF5 419 aa6.9□□□□□ -1.3
GARNL3-213ENST00000464616 ZCCHC2Q9C0B9 1178 aaKnown RBP6.9□□□□□ -1.3
GARNL3-213ENST00000464616 ZNF232Q9UNY5 417 aa6.9□□□□□ -1.3
GARNL3-213ENST00000464616 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
GARNL3-213ENST00000464616 KHNYNO15037 678 aaKnown RBP6.89□□□□□ -1.31
GARNL3-213ENST00000464616 BNIP3LO60238 219 aa6.89□□□□□ -1.31
GARNL3-213ENST00000464616 ATP1A2P50993 1020 aa6.89□□□□□ -1.31
GARNL3-213ENST00000464616 POM121Q96HA1 1249 aa6.89□□□□□ -1.31
GARNL3-213ENST00000464616 SLC4A9Q96Q91 983 aa6.89□□□□□ -1.31
GARNL3-213ENST00000464616 ALG2Q9H553 416 aa6.89□□□□□ -1.31
GARNL3-213ENST00000464616 PRR12Q9ULL5 1215 aa6.89□□□□□ -1.31
GARNL3-213ENST00000464616 DCDC2BA2VCK2 349 aa6.88□□□□□ -1.31
GARNL3-213ENST00000464616 USP17L5A8MUK1 530 aa6.88□□□□□ -1.31
GARNL3-213ENST00000464616 TMEM229AB2RXF0 380 aa6.88□□□□□ -1.31
GARNL3-213ENST00000464616 THBS1P07996 1170 aa6.88□□□□□ -1.31
GARNL3-213ENST00000464616 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.88□□□□□ -1.31
GARNL3-213ENST00000464616 GGA1Q9UJY5 639 aa6.88□□□□□ -1.31
GARNL3-213ENST00000464616 PCDHGA11Q9Y5H2 935 aa6.88□□□□□ -1.31
GARNL3-213ENST00000464616 PARP3Q9Y6F1 533 aa6.88□□□□□ -1.31
GARNL3-213ENST00000464616 CTBSQ01459 385 aa6.87□□□□□ -1.31
GARNL3-213ENST00000464616 HDGFL1Q5TGJ6 251 aa6.87□□□□□ -1.31
GARNL3-213ENST00000464616 ZDHHC3Q9NYG2 299 aa6.87□□□□□ -1.31
GARNL3-213ENST00000464616 ATP4AP20648 1035 aa6.86□□□□□ -1.31
GARNL3-213ENST00000464616 MTFR1Q15390 333 aa6.86□□□□□ -1.31
GARNL3-213ENST00000464616 ZNF358Q9NW07 568 aa6.86□□□□□ -1.31
GARNL3-213ENST00000464616 NEURL1BA8MQ27 555 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 SHISA8B8ZZ34 492 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 MSTNO14793 375 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 ARAFP10398 606 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 MAPTP10636 758 aaKnown RBP6.85□□□□□ -1.31
GARNL3-213ENST00000464616 ADH6P28332 368 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 UBAP2LQ14157 1087 aaKnown RBP6.85□□□□□ -1.31
GARNL3-213ENST00000464616 SLCO4C1Q6ZQN7 724 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 TPCN2Q8NHX9 752 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 L3MBTL2Q969R5 705 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 DCAF5Q96JK2 942 aa6.85□□□□□ -1.31
GARNL3-213ENST00000464616 CD33P20138 364 aa6.84□□□□□ -1.31
GARNL3-213ENST00000464616 SNRPNP63162 240 aaKnown RBP6.84□□□□□ -1.31
GARNL3-213ENST00000464616 GRIN2CQ14957 1233 aa6.84□□□□□ -1.31
GARNL3-213ENST00000464616 CCDC102BQ68D86 513 aa6.84□□□□□ -1.31
GARNL3-213ENST00000464616 ZIC5Q96T25 663 aa6.84□□□□□ -1.31
GARNL3-213ENST00000464616 MARK1Q9P0L2 795 aa6.84□□□□□ -1.31
GARNL3-213ENST00000464616 SCHIP1Q9P0W5 487 aaPredicted RBP6.84□□□□□ -1.31
GARNL3-213ENST00000464616 SERTM1A2A2V5 107 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 POM121CA8CG34 1229 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 C2CD2LO14523 706 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 ALAS2P22557 587 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 NOS2P35228 1153 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 SUZ12Q15022 739 aaKnown RBP6.83□□□□□ -1.32
GARNL3-213ENST00000464616 PLA2G4EQ3MJ16 856 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 TBCELQ5QJ74 424 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 ALYREFQ86V81 257 aaKnown RBP6.83□□□□□ -1.32
GARNL3-213ENST00000464616 SLC9A9Q8IVB4 645 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 TNS4Q8IZW8 715 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 NDFIP2Q9NV92 336 aa6.83□□□□□ -1.32
GARNL3-213ENST00000464616 DNAAF2Q9NVR5 837 aaKnown RBP6.83□□□□□ -1.32
GARNL3-213ENST00000464616 IQSEC3Q9UPP2 1182 aaPredicted RBP6.83□□□□□ -1.32
GARNL3-213ENST00000464616 ATP9BO43861 1147 aa6.82□□□□□ -1.32
GARNL3-213ENST00000464616 TNP2Q05952 138 aa6.82□□□□□ -1.32
GARNL3-213ENST00000464616 NEUROD1Q13562 356 aa6.82□□□□□ -1.32
GARNL3-213ENST00000464616 LRRC69Q6ZNQ3 347 aa6.82□□□□□ -1.32
GARNL3-213ENST00000464616 OGFOD1Q8N543 542 aa6.82□□□□□ -1.32
GARNL3-213ENST00000464616 RHPN1Q8TCX5 695 aa6.82□□□□□ -1.32
GARNL3-213ENST00000464616 NOP53Q9NZM5 478 aaKnown RBP6.82□□□□□ -1.32
GARNL3-213ENST00000464616 MKRN1Q9UHC7 482 aaKnown RBP6.82□□□□□ -1.32
GARNL3-213ENST00000464616 USP3Q9Y6I4 520 aa6.82□□□□□ -1.32
GARNL3-213ENST00000464616 PALM3A6NDB9 673 aaPredicted RBP6.81□□□□□ -1.32
GARNL3-213ENST00000464616 GNB5O14775 395 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 FAM157BP0CG42 384 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 EPXP11678 715 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 TXLNAP40222 546 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 PCBP4P57723 403 aaKnown RBP6.81□□□□□ -1.32
GARNL3-213ENST00000464616 TEAD4Q15561 434 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 FAM182BQ5T319 152 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 C1orf229Q6ZS94 237 aaPredicted RBP6.81□□□□□ -1.32
GARNL3-213ENST00000464616 PLEKHM2Q8IWE5 1019 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 BTBD6Q96KE9 485 aa6.81□□□□□ -1.32
GARNL3-213ENST00000464616 AVENQ9NQS1 362 aaPredicted RBP6.81□□□□□ -1.32
GARNL3-213ENST00000464616 PSMA6P60900 246 aaKnown RBP6.8□□□□□ -1.32
GARNL3-213ENST00000464616 LAMC2Q13753 1193 aa6.8□□□□□ -1.32
GARNL3-213ENST00000464616 TMEM132AQ24JP5 1023 aa6.8□□□□□ -1.32
GARNL3-213ENST00000464616 LARGE2Q8N3Y3 721 aa6.8□□□□□ -1.32
GARNL3-213ENST00000464616 ZNF594Q96JF6 807 aaPredicted RBP6.8□□□□□ -1.32
GARNL3-213ENST00000464616 ANKIB1Q9P2G1 1089 aa6.8□□□□□ -1.32
GARNL3-213ENST00000464616 RASA1P20936 1047 aa6.79□□□□□ -1.32
GARNL3-213ENST00000464616 SAMD5Q5TGI4 173 aa6.79□□□□□ -1.32
GARNL3-213ENST00000464616 LARP1Q6PKG0 1096 aaKnown RBP6.79□□□□□ -1.32
GARNL3-213ENST00000464616 CHSY3Q70JA7 882 aa6.79□□□□□ -1.32
GARNL3-213ENST00000464616 PROSER2Q86WR7 435 aaPredicted RBP6.79□□□□□ -1.32
GARNL3-213ENST00000464616 HCN4Q9Y3Q4 1203 aa6.79□□□□□ -1.32
GARNL3-213ENST00000464616 GPC6Q9Y625 555 aaPredicted RBP6.79□□□□□ -1.32
GARNL3-213ENST00000464616 PPP1R12BO60237 982 aaPredicted RBP6.78□□□□□ -1.32
GARNL3-213ENST00000464616 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms