RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 TEX13AQ9BXU3 409 aaPredicted RBP23.26■■□□□ 1.31
VPS52-214ENST00000463486 ZBTB1Q9Y2K1 713 aa23.26■■□□□ 1.31
VPS52-214ENST00000463486 EIF4A1P60842 406 aaKnown RBP23.25■■□□□ 1.31
VPS52-214ENST00000463486 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
VPS52-214ENST00000463486 SOS1Q07889 1333 aaPredicted RBP23.25■■□□□ 1.31
VPS52-214ENST00000463486 STARD3NLO95772 234 aa23.24■■□□□ 1.31
VPS52-214ENST00000463486 BABAM1Q9NWV8 329 aa23.24■■□□□ 1.31
VPS52-214ENST00000463486 CHL1O00533 1208 aa23.23■■□□□ 1.31
VPS52-214ENST00000463486 SNRPA1P09661 255 aaKnown RBP23.23■■□□□ 1.31
VPS52-214ENST00000463486 MSL1Q68DK7 614 aa23.22■■□□□ 1.31
VPS52-214ENST00000463486 GIGYF1O75420 1035 aaPredicted RBP23.21■■□□□ 1.31
VPS52-214ENST00000463486 A1BGP04217 495 aa23.21■■□□□ 1.31
VPS52-214ENST00000463486 EIF5P55010 431 aaKnown RBP23.21■■□□□ 1.31
VPS52-214ENST00000463486 C4AP0C0L4 1744 aa23.2■■□□□ 1.3
VPS52-214ENST00000463486 ZNF853P0CG23 659 aa23.2■■□□□ 1.3
VPS52-214ENST00000463486 TSPYL4Q9UJ04 414 aa23.2■■□□□ 1.3
VPS52-214ENST00000463486 SENP3-EIF4A1A0A087X0R7 540 aa23.19■■□□□ 1.3
VPS52-214ENST00000463486 GYS1P13807 737 aa23.19■■□□□ 1.3
VPS52-214ENST00000463486 NCBP3Q53F19 620 aaKnown RBP23.19■■□□□ 1.3
VPS52-214ENST00000463486 ARXQ96QS3 562 aa23.19■■□□□ 1.3
VPS52-214ENST00000463486 USP42Q9H9J4 1324 aaKnown RBP23.18■■□□□ 1.3
VPS52-214ENST00000463486 CANXP27824 592 aaKnown RBP23.18■■□□□ 1.3
VPS52-214ENST00000463486 RFC4P35249 363 aa23.18■■□□□ 1.3
VPS52-214ENST00000463486 CCDC27Q2M243 656 aa23.18■■□□□ 1.3
VPS52-214ENST00000463486 FAM9BQ8IZU0 186 aa23.18■■□□□ 1.3
VPS52-214ENST00000463486 SRP68Q9UHB9 627 aaKnown RBP23.18■■□□□ 1.3
VPS52-214ENST00000463486 NBPF26B4DH59 902 aa23.17■■□□□ 1.3
VPS52-214ENST00000463486 NBPF10Q6P3W6 841 aaKnown RBP23.17■■□□□ 1.3
VPS52-214ENST00000463486 NBPF15Q8N660 670 aa23.17■■□□□ 1.3
VPS52-214ENST00000463486 CFAP44Q96MT7 982 aa23.17■■□□□ 1.3
VPS52-214ENST00000463486 COL15A1P39059 1388 aa23.16■■□□□ 1.3
VPS52-214ENST00000463486 CCER2I3L3R5 266 aa23.16■■□□□ 1.3
VPS52-214ENST00000463486 POLD1P28340 1107 aa23.16■■□□□ 1.3
VPS52-214ENST00000463486 IL6STP40189 918 aaPredicted RBP23.16■■□□□ 1.3
VPS52-214ENST00000463486 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
VPS52-214ENST00000463486 PPP1R1BQ9UD71 204 aaPredicted RBP23.16■■□□□ 1.3
VPS52-214ENST00000463486 WWC1Q8IX03 1113 aa23.15■■□□□ 1.3
VPS52-214ENST00000463486 BCL2L12Q9HB09 334 aa23.15■■□□□ 1.3
VPS52-214ENST00000463486 PIP4K2AP48426 406 aaPredicted RBP23.14■■□□□ 1.29
VPS52-214ENST00000463486 NLGN1Q8N2Q7 840 aa23.14■■□□□ 1.29
VPS52-214ENST00000463486 FHDC1Q9C0D6 1143 aaPredicted RBP23.14■■□□□ 1.29
VPS52-214ENST00000463486 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
VPS52-214ENST00000463486 FKBP8Q14318 412 aa23.13■■□□□ 1.29
VPS52-214ENST00000463486 KRT24Q2M2I5 525 aa23.13■■□□□ 1.29
VPS52-214ENST00000463486 IFT57Q9NWB7 429 aa23.13■■□□□ 1.29
VPS52-214ENST00000463486 USPL1Q5W0Q7 1092 aa23.12■■□□□ 1.29
VPS52-214ENST00000463486 SYT17Q9BSW7 474 aa23.12■■□□□ 1.29
VPS52-214ENST00000463486 MBIPQ9NS73 344 aa23.12■■□□□ 1.29
VPS52-214ENST00000463486 LAS1LQ9Y4W2 734 aaKnown RBP23.12■■□□□ 1.29
VPS52-214ENST00000463486 LAMB4A4D0S4 1761 aa23.12■■□□□ 1.29
VPS52-214ENST00000463486 MMP10P09238 476 aa23.11■■□□□ 1.29
VPS52-214ENST00000463486 TM4SF1P30408 202 aa23.1■■□□□ 1.29
VPS52-214ENST00000463486 MIER1Q8N108 512 aa23.1■■□□□ 1.29
VPS52-214ENST00000463486 GNAI1P63096 354 aa23.09■■□□□ 1.29
VPS52-214ENST00000463486 CALD1Q05682 793 aaKnown RBP23.09■■□□□ 1.29
VPS52-214ENST00000463486 A0A087WZG4 1122 aa23.08■■□□□ 1.29
VPS52-214ENST00000463486 ZPR1O75312 459 aa23.08■■□□□ 1.29
VPS52-214ENST00000463486 PDIA6Q15084 440 aa23.08■■□□□ 1.29
VPS52-214ENST00000463486 LRP10Q7Z4F1 713 aa23.08■■□□□ 1.29
VPS52-214ENST00000463486 TBC1D2BQ9UPU7 963 aa23.08■■□□□ 1.29
VPS52-214ENST00000463486 CAMTA2O94983 1202 aa23.07■■□□□ 1.28
VPS52-214ENST00000463486 DDR1Q08345 913 aa23.07■■□□□ 1.28
VPS52-214ENST00000463486 IL16Q14005 1332 aa23.06■■□□□ 1.28
VPS52-214ENST00000463486 ZNF330Q9Y3S2 320 aaPredicted RBP23.05■■□□□ 1.28
VPS52-214ENST00000463486 NFIXQ14938 502 aa23.04■■□□□ 1.28
VPS52-214ENST00000463486 DZIP3Q86Y13 1208 aaKnown RBP23.04■■□□□ 1.28
VPS52-214ENST00000463486 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
VPS52-214ENST00000463486 CD2APQ9Y5K6 639 aa23.04■■□□□ 1.28
VPS52-214ENST00000463486 GOLGB1Q14789 3259 aaKnown RBP23.04■■□□□ 1.28
VPS52-214ENST00000463486 UTRNP46939 3433 aa23.04■■□□□ 1.28
VPS52-214ENST00000463486 ERBB4Q15303 1308 aa23.04■■□□□ 1.28
VPS52-214ENST00000463486 ZNF521Q96K83 1311 aa23.04■■□□□ 1.28
VPS52-214ENST00000463486 POLRMTO00411 1230 aaKnown RBP23.03■■□□□ 1.28
VPS52-214ENST00000463486 HOXB7P09629 217 aa23.03■■□□□ 1.28
VPS52-214ENST00000463486 PROSER3Q2NL68 480 aa23.03■■□□□ 1.28
VPS52-214ENST00000463486 WDR63Q8IWG1 891 aa23.03■■□□□ 1.28
VPS52-214ENST00000463486 NGEFQ8N5V2 710 aa23.03■■□□□ 1.28
VPS52-214ENST00000463486 NLGN2Q8NFZ4 835 aa23.03■■□□□ 1.28
VPS52-214ENST00000463486 SCN7AQ01118 1682 aa23.03■■□□□ 1.28
VPS52-214ENST00000463486 EIF2S2P20042 333 aaKnown RBP23.02■■□□□ 1.28
VPS52-214ENST00000463486 DUSP27Q5VZP5 1158 aa23.02■■□□□ 1.28
VPS52-214ENST00000463486 C8orf58Q8NAV2 365 aa23.02■■□□□ 1.28
VPS52-214ENST00000463486 SPINK5Q9NQ38 1064 aaPredicted RBP23.02■■□□□ 1.28
VPS52-214ENST00000463486 TSR2Q969E8 191 aaKnown RBP23.01■■□□□ 1.27
VPS52-214ENST00000463486 BCORQ6W2J9 1755 aa23■■□□□ 1.27
VPS52-214ENST00000463486 MYL6BP14649 208 aa23■■□□□ 1.27
VPS52-214ENST00000463486 TBC1D9BQ66K14 1250 aa23■■□□□ 1.27
VPS52-214ENST00000463486 TTLL7Q6ZT98 887 aa23■■□□□ 1.27
VPS52-214ENST00000463486 PARP3Q9Y6F1 533 aa23■■□□□ 1.27
VPS52-214ENST00000463486 C10orf71Q711Q0 1435 aa22.99■■□□□ 1.27
VPS52-214ENST00000463486 RGL2O15211 777 aa22.99■■□□□ 1.27
VPS52-214ENST00000463486 ANXA1P04083 346 aa22.99■■□□□ 1.27
VPS52-214ENST00000463486 HLFQ16534 295 aa22.98■■□□□ 1.27
VPS52-214ENST00000463486 CLEC4GQ6UXB4 293 aa22.98■■□□□ 1.27
VPS52-214ENST00000463486 KLHL34Q8N239 644 aa22.98■■□□□ 1.27
VPS52-214ENST00000463486 TSPYL6Q8N831 410 aa22.98■■□□□ 1.27
VPS52-214ENST00000463486 NECTIN2Q92692 538 aa22.98■■□□□ 1.27
VPS52-214ENST00000463486 KIF13BQ9NQT8 1826 aa22.98■■□□□ 1.27
VPS52-214ENST00000463486 ELL2O00472 640 aaPredicted RBP22.97■■□□□ 1.27
VPS52-214ENST00000463486 DDX21Q9NR30 783 aaKnown RBP eCLIP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 1039 ms