RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 TAF7Q15545 349 aaPredicted RBP19.69■□□□□ 0.74
ATG4B-213ENST00000460211 RFC4P35249 363 aa19.68■□□□□ 0.74
ATG4B-213ENST00000460211 LMOD3Q0VAK6 560 aa19.68■□□□□ 0.74
ATG4B-213ENST00000460211 PNISRQ8TF01 805 aaKnown RBP19.68■□□□□ 0.74
ATG4B-213ENST00000460211 RUNDC1Q96C34 613 aa19.68■□□□□ 0.74
ATG4B-213ENST00000460211 ZNF496Q96IT1 587 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-213ENST00000460211 CCDC87Q9NVE4 849 aa19.68■□□□□ 0.74
ATG4B-213ENST00000460211 CICQ96RK0 1608 aaPredicted RBP19.68■□□□□ 0.74
ATG4B-213ENST00000460211 KIF3CO14782 793 aa19.67■□□□□ 0.74
ATG4B-213ENST00000460211 RIPK4P57078 832 aa19.67■□□□□ 0.74
ATG4B-213ENST00000460211 ADAMTS8Q9UP79 889 aa19.67■□□□□ 0.74
ATG4B-213ENST00000460211 KIAA1551Q9HCM1 1747 aa19.67■□□□□ 0.74
ATG4B-213ENST00000460211 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
ATG4B-213ENST00000460211 CYP19A1P11511 503 aaPredicted RBP19.66■□□□□ 0.74
ATG4B-213ENST00000460211 CCDC146Q8IYE0 955 aa19.66■□□□□ 0.74
ATG4B-213ENST00000460211 ARHGEF1Q92888 912 aaKnown RBP19.66■□□□□ 0.74
ATG4B-213ENST00000460211 BCS1LQ9Y276 419 aa19.66■□□□□ 0.74
ATG4B-213ENST00000460211 HEG1Q9ULI3 1381 aa19.66■□□□□ 0.74
ATG4B-213ENST00000460211 KIF13BQ9NQT8 1826 aa19.65■□□□□ 0.74
ATG4B-213ENST00000460211 A0A0G2JLW4 131 aa19.65■□□□□ 0.74
ATG4B-213ENST00000460211 TMPOP42166 694 aaKnown RBP19.65■□□□□ 0.74
ATG4B-213ENST00000460211 INTS5Q6P9B9 1019 aaKnown RBP19.65■□□□□ 0.74
ATG4B-213ENST00000460211 KCPQ6ZWJ8 1503 aa19.65■□□□□ 0.74
ATG4B-213ENST00000460211 VIRMAQ69YN4 1812 aaKnown RBP19.65■□□□□ 0.74
ATG4B-213ENST00000460211 NLGN1Q8N2Q7 840 aa19.64■□□□□ 0.73
ATG4B-213ENST00000460211 KCNQ3O43525 872 aa19.63■□□□□ 0.73
ATG4B-213ENST00000460211 SNRPA1P09661 255 aaKnown RBP19.62■□□□□ 0.73
ATG4B-213ENST00000460211 NEUROD2Q15784 382 aa19.62■□□□□ 0.73
ATG4B-213ENST00000460211 ARHGAP27Q6ZUM4 889 aa19.62■□□□□ 0.73
ATG4B-213ENST00000460211 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
ATG4B-213ENST00000460211 ZPR1O75312 459 aa19.61■□□□□ 0.73
ATG4B-213ENST00000460211 CANXP27824 592 aaKnown RBP19.61■□□□□ 0.73
ATG4B-213ENST00000460211 TGFB2P61812 414 aa19.61■□□□□ 0.73
ATG4B-213ENST00000460211 THUMPD2Q9BTF0 503 aaKnown RBP19.61■□□□□ 0.73
ATG4B-213ENST00000460211 COL5A3P25940 1745 aaPredicted RBP19.61■□□□□ 0.73
ATG4B-213ENST00000460211 C10orf71Q711Q0 1435 aa19.6■□□□□ 0.73
ATG4B-213ENST00000460211 C4AP0C0L4 1744 aa19.6■□□□□ 0.73
ATG4B-213ENST00000460211 SOS1Q07889 1333 aaPredicted RBP19.6■□□□□ 0.73
ATG4B-213ENST00000460211 DPEP1P16444 411 aa19.6■□□□□ 0.73
ATG4B-213ENST00000460211 MIS18AQ9NYP9 233 aa19.6■□□□□ 0.73
ATG4B-213ENST00000460211 ZBTB1Q9Y2K1 713 aa19.6■□□□□ 0.73
ATG4B-213ENST00000460211 RRP7AQ9Y3A4 280 aaKnown RBP19.6■□□□□ 0.73
ATG4B-213ENST00000460211 A0A087WZG4 1122 aa19.59■□□□□ 0.73
ATG4B-213ENST00000460211 MRS2Q9HD23 443 aa19.59■□□□□ 0.73
ATG4B-213ENST00000460211 TJP1Q07157 1748 aa19.59■□□□□ 0.73
ATG4B-213ENST00000460211 SIPA1L3O60292 1781 aaPredicted RBP19.58■□□□□ 0.73
ATG4B-213ENST00000460211 GYS1P13807 737 aa19.58■□□□□ 0.72
ATG4B-213ENST00000460211 NMRK2Q9NPI5 230 aa19.58■□□□□ 0.72
ATG4B-213ENST00000460211 BABAM1Q9NWV8 329 aa19.58■□□□□ 0.72
ATG4B-213ENST00000460211 PARP3Q9Y6F1 533 aa19.58■□□□□ 0.72
ATG4B-213ENST00000460211 UBR2Q8IWV8 1755 aa19.57■□□□□ 0.72
ATG4B-213ENST00000460211 MYH14Q7Z406 1995 aaKnown RBP19.57■□□□□ 0.72
ATG4B-213ENST00000460211 BRCA1P38398 1863 aaKnown RBP19.57■□□□□ 0.72
ATG4B-213ENST00000460211 TSPYL4Q9UJ04 414 aa19.57■□□□□ 0.72
ATG4B-213ENST00000460211 USP42Q9H9J4 1324 aaKnown RBP19.56■□□□□ 0.72
ATG4B-213ENST00000460211 TOMM70O94826 608 aa19.56■□□□□ 0.72
ATG4B-213ENST00000460211 APLP1P51693 650 aa19.56■□□□□ 0.72
ATG4B-213ENST00000460211 SRP68Q9UHB9 627 aaKnown RBP19.56■□□□□ 0.72
ATG4B-213ENST00000460211 NARFQ9UHQ1 456 aa19.56■□□□□ 0.72
ATG4B-213ENST00000460211 USP16Q9Y5T5 823 aa19.56■□□□□ 0.72
ATG4B-213ENST00000460211 COL15A1P39059 1388 aa19.56■□□□□ 0.72
ATG4B-213ENST00000460211 A1BGP04217 495 aa19.55■□□□□ 0.72
ATG4B-213ENST00000460211 IL6STP40189 918 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-213ENST00000460211 EIF5P55010 431 aaKnown RBP19.55■□□□□ 0.72
ATG4B-213ENST00000460211 CCDC184Q52MB2 194 aa19.55■□□□□ 0.72
ATG4B-213ENST00000460211 ZNF330Q9Y3S2 320 aaPredicted RBP19.55■□□□□ 0.72
ATG4B-213ENST00000460211 DLG5Q8TDM6 1919 aa19.55■□□□□ 0.72
ATG4B-213ENST00000460211 APAF1O14727 1248 aa19.54■□□□□ 0.72
ATG4B-213ENST00000460211 USPL1Q5W0Q7 1092 aa19.54■□□□□ 0.72
ATG4B-213ENST00000460211 EIF4A1P60842 406 aaKnown RBP19.53■□□□□ 0.72
ATG4B-213ENST00000460211 C9orf131Q5VYM1 1079 aa19.53■□□□□ 0.72
ATG4B-213ENST00000460211 TRIM35Q9UPQ4 493 aa19.53■□□□□ 0.72
ATG4B-213ENST00000460211 KCNA3P22001 575 aa19.52■□□□□ 0.72
ATG4B-213ENST00000460211 CALD1Q05682 793 aaKnown RBP19.52■□□□□ 0.72
ATG4B-213ENST00000460211 FKBP8Q14318 412 aa19.52■□□□□ 0.72
ATG4B-213ENST00000460211 ARFGEF1Q9Y6D6 1849 aa19.52■□□□□ 0.72
ATG4B-213ENST00000460211 PRAMEF22A3QJZ6 481 aa19.51■□□□□ 0.71
ATG4B-213ENST00000460211 DNAJC5GQ8N7S2 189 aa19.51■□□□□ 0.71
ATG4B-213ENST00000460211 LAS1LQ9Y4W2 734 aaKnown RBP19.51■□□□□ 0.71
ATG4B-213ENST00000460211 PIM2Q9P1W9 311 aa19.5■□□□□ 0.71
ATG4B-213ENST00000460211 WDR90Q96KV7 1748 aa19.5■□□□□ 0.71
ATG4B-213ENST00000460211 HTRA3P83110 453 aa19.49■□□□□ 0.71
ATG4B-213ENST00000460211 DDR1Q08345 913 aa19.49■□□□□ 0.71
ATG4B-213ENST00000460211 C16orf71Q8IYS4 520 aaPredicted RBP19.49■□□□□ 0.71
ATG4B-213ENST00000460211 TBC1D2BQ9UPU7 963 aa19.49■□□□□ 0.71
ATG4B-213ENST00000460211 CHL1O00533 1208 aa19.48■□□□□ 0.71
ATG4B-213ENST00000460211 CHRNA5P30532 468 aa19.48■□□□□ 0.71
ATG4B-213ENST00000460211 DALRD3Q5D0E6 543 aaKnown RBP19.48■□□□□ 0.71
ATG4B-213ENST00000460211 TM4SF1P30408 202 aa19.47■□□□□ 0.71
ATG4B-213ENST00000460211 DZIP3Q86Y13 1208 aaKnown RBP19.47■□□□□ 0.71
ATG4B-213ENST00000460211 CFAP44Q96MT7 982 aa19.47■□□□□ 0.71
ATG4B-213ENST00000460211 RNF181Q9P0P0 153 aa19.47■□□□□ 0.71
ATG4B-213ENST00000460211 PIP4K2AP48426 406 aaPredicted RBP19.46■□□□□ 0.71
ATG4B-213ENST00000460211 RBM46Q8TBY0 533 aaKnown RBP19.46■□□□□ 0.71
ATG4B-213ENST00000460211 NFIXQ14938 502 aa19.45■□□□□ 0.7
ATG4B-213ENST00000460211 BCL2L12Q9HB09 334 aa19.45■□□□□ 0.7
ATG4B-213ENST00000460211 ZNF652Q9Y2D9 606 aa19.45■□□□□ 0.7
ATG4B-213ENST00000460211 NBPF26B4DH59 902 aa19.44■□□□□ 0.7
ATG4B-213ENST00000460211 POLRMTO00411 1230 aaKnown RBP19.44■□□□□ 0.7
ATG4B-213ENST00000460211 GNAI1P63096 354 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms