RNA–Protein interactions for RNA: ENST00000459640.5

NECAP2-204, Transcript of NECAP endocytosis associated 2, humanhuman

TSL 3

Gene NECAP2, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP2-204ENST00000459640 LAMB4A4D0S4 1761 aa18.65■□□□□ 0.58
NECAP2-204ENST00000459640 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
NECAP2-204ENST00000459640 USP42Q9H9J4 1324 aaKnown RBP18.65■□□□□ 0.58
NECAP2-204ENST00000459640 COL15A1P39059 1388 aa18.65■□□□□ 0.58
NECAP2-204ENST00000459640 N4BP2Q86UW6 1770 aaPredicted RBP18.65■□□□□ 0.58
NECAP2-204ENST00000459640 KIAA1551Q9HCM1 1747 aa18.64■□□□□ 0.57
NECAP2-204ENST00000459640 CANXP27824 592 aaKnown RBP18.64■□□□□ 0.57
NECAP2-204ENST00000459640 WDR43Q15061 677 aaKnown RBP eCLIP18.64■□□□□ 0.57
NECAP2-204ENST00000459640 MIS18AQ9NYP9 233 aa18.64■□□□□ 0.57
NECAP2-204ENST00000459640 CHD4Q14839 1912 aa18.64■□□□□ 0.57
NECAP2-204ENST00000459640 PRAMEF22A3QJZ6 481 aa18.63■□□□□ 0.57
NECAP2-204ENST00000459640 STARD3NLO95772 234 aa18.63■□□□□ 0.57
NECAP2-204ENST00000459640 NLGN1Q8N2Q7 840 aa18.63■□□□□ 0.57
NECAP2-204ENST00000459640 SCN7AQ01118 1682 aa18.63■□□□□ 0.57
NECAP2-204ENST00000459640 FKBP8Q14318 412 aa18.62■□□□□ 0.57
NECAP2-204ENST00000459640 CD2APQ9Y5K6 639 aa18.62■□□□□ 0.57
NECAP2-204ENST00000459640 AFDNP55196 1824 aaKnown RBP18.62■□□□□ 0.57
NECAP2-204ENST00000459640 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
NECAP2-204ENST00000459640 GPR162Q16538 588 aa18.61■□□□□ 0.57
NECAP2-204ENST00000459640 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
NECAP2-204ENST00000459640 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
NECAP2-204ENST00000459640 BCORQ6W2J9 1755 aa18.6■□□□□ 0.57
NECAP2-204ENST00000459640 ZPR1O75312 459 aa18.6■□□□□ 0.57
NECAP2-204ENST00000459640 RIPK4P57078 832 aa18.6■□□□□ 0.57
NECAP2-204ENST00000459640 TEX13AQ9BXU3 409 aaPredicted RBP18.6■□□□□ 0.57
NECAP2-204ENST00000459640 WWC3Q9ULE0 1092 aa18.6■□□□□ 0.57
NECAP2-204ENST00000459640 ADAMTS8Q9UP79 889 aa18.6■□□□□ 0.57
NECAP2-204ENST00000459640 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
NECAP2-204ENST00000459640 A1BGP04217 495 aa18.59■□□□□ 0.57
NECAP2-204ENST00000459640 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
NECAP2-204ENST00000459640 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
NECAP2-204ENST00000459640 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
NECAP2-204ENST00000459640 C10orf71Q711Q0 1435 aa18.58■□□□□ 0.57
NECAP2-204ENST00000459640 YBX3P16989 372 aaKnown RBP eCLIP18.58■□□□□ 0.56
NECAP2-204ENST00000459640 DDR1Q08345 913 aa18.58■□□□□ 0.56
NECAP2-204ENST00000459640 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
NECAP2-204ENST00000459640 NARFQ9UHQ1 456 aa18.58■□□□□ 0.56
NECAP2-204ENST00000459640 PARP3Q9Y6F1 533 aa18.58■□□□□ 0.56
NECAP2-204ENST00000459640 BRCA1P38398 1863 aaKnown RBP18.57■□□□□ 0.56
NECAP2-204ENST00000459640 SNRPA1P09661 255 aaKnown RBP18.57■□□□□ 0.56
NECAP2-204ENST00000459640 YY1P25490 414 aa18.57■□□□□ 0.56
NECAP2-204ENST00000459640 EIF5P55010 431 aaKnown RBP18.57■□□□□ 0.56
NECAP2-204ENST00000459640 CCDC184Q52MB2 194 aa18.57■□□□□ 0.56
NECAP2-204ENST00000459640 RUNDC1Q96C34 613 aa18.57■□□□□ 0.56
NECAP2-204ENST00000459640 BCL2L12Q9HB09 334 aa18.56■□□□□ 0.56
NECAP2-204ENST00000459640 PXDNLA1KZ92 1463 aa18.56■□□□□ 0.56
NECAP2-204ENST00000459640 GOLGB1Q14789 3259 aaKnown RBP18.55■□□□□ 0.56
NECAP2-204ENST00000459640 NRXN2Q9P2S2 1712 aa18.55■□□□□ 0.56
NECAP2-204ENST00000459640 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
NECAP2-204ENST00000459640 TBC1D2BQ9UPU7 963 aa18.55■□□□□ 0.56
NECAP2-204ENST00000459640 IL6STP40189 918 aaPredicted RBP18.54■□□□□ 0.56
NECAP2-204ENST00000459640 UTRNP46939 3433 aa18.54■□□□□ 0.56
NECAP2-204ENST00000459640 A0A087WZG4 1122 aa18.53■□□□□ 0.56
NECAP2-204ENST00000459640 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
NECAP2-204ENST00000459640 TM4SF1P30408 202 aa18.53■□□□□ 0.56
NECAP2-204ENST00000459640 LMOD3Q0VAK6 560 aa18.53■□□□□ 0.56
NECAP2-204ENST00000459640 NFIXQ14938 502 aa18.53■□□□□ 0.56
NECAP2-204ENST00000459640 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
NECAP2-204ENST00000459640 BICDL1Q6ZP65 573 aa18.52■□□□□ 0.56
NECAP2-204ENST00000459640 TSPYL4Q9UJ04 414 aa18.52■□□□□ 0.56
NECAP2-204ENST00000459640 TRIM35Q9UPQ4 493 aa18.52■□□□□ 0.56
NECAP2-204ENST00000459640 A0A0G2JLW4 131 aa18.51■□□□□ 0.55
NECAP2-204ENST00000459640 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
NECAP2-204ENST00000459640 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
NECAP2-204ENST00000459640 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
NECAP2-204ENST00000459640 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
NECAP2-204ENST00000459640 ANP32CO43423 234 aa18.5■□□□□ 0.55
NECAP2-204ENST00000459640 GIGYF1O75420 1035 aaPredicted RBP18.5■□□□□ 0.55
NECAP2-204ENST00000459640 NPM2Q86SE8 214 aaKnown RBP18.5■□□□□ 0.55
NECAP2-204ENST00000459640 DZIP3Q86Y13 1208 aaKnown RBP18.5■□□□□ 0.55
NECAP2-204ENST00000459640 DLEC1Q9Y238 1755 aa18.5■□□□□ 0.55
NECAP2-204ENST00000459640 CAMTA2O94983 1202 aa18.49■□□□□ 0.55
NECAP2-204ENST00000459640 DPEP1P16444 411 aa18.49■□□□□ 0.55
NECAP2-204ENST00000459640 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
NECAP2-204ENST00000459640 TGFB2P61812 414 aa18.48■□□□□ 0.55
NECAP2-204ENST00000459640 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
NECAP2-204ENST00000459640 NUP98P52948 1817 aa18.48■□□□□ 0.55
NECAP2-204ENST00000459640 ARFGEF1Q9Y6D6 1849 aa18.48■□□□□ 0.55
NECAP2-204ENST00000459640 CARMIL3Q8ND23 1372 aa18.47■□□□□ 0.55
NECAP2-204ENST00000459640 SENP3-EIF4A1A0A087X0R7 540 aa18.47■□□□□ 0.55
NECAP2-204ENST00000459640 APAF1O14727 1248 aa18.47■□□□□ 0.55
NECAP2-204ENST00000459640 GRIN3BO60391 1043 aa18.47■□□□□ 0.55
NECAP2-204ENST00000459640 SERPINB2P05120 415 aa18.47■□□□□ 0.55
NECAP2-204ENST00000459640 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
NECAP2-204ENST00000459640 NGEFQ8N5V2 710 aa18.46■□□□□ 0.55
NECAP2-204ENST00000459640 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
NECAP2-204ENST00000459640 CACNA1SQ13698 1873 aa18.46■□□□□ 0.54
NECAP2-204ENST00000459640 CHRNA5P30532 468 aa18.45■□□□□ 0.54
NECAP2-204ENST00000459640 BCS1LQ9Y276 419 aa18.45■□□□□ 0.54
NECAP2-204ENST00000459640 MYL6BP14649 208 aa18.44■□□□□ 0.54
NECAP2-204ENST00000459640 KCNA3P22001 575 aa18.44■□□□□ 0.54
NECAP2-204ENST00000459640 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
NECAP2-204ENST00000459640 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
NECAP2-204ENST00000459640 EIF2S2P20042 333 aaKnown RBP18.43■□□□□ 0.54
NECAP2-204ENST00000459640 CCDC24Q8N4L8 307 aa18.43■□□□□ 0.54
NECAP2-204ENST00000459640 CHL1O00533 1208 aa18.42■□□□□ 0.54
NECAP2-204ENST00000459640 NECTIN2Q92692 538 aa18.42■□□□□ 0.54
NECAP2-204ENST00000459640 SETDB2Q96T68 719 aa18.41■□□□□ 0.54
NECAP2-204ENST00000459640 ANXA1P04083 346 aa18.4■□□□□ 0.54
NECAP2-204ENST00000459640 HLFQ16534 295 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms