RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 CDK12Q9NYV4 1490 aaPredicted RBP16.82■□□□□ 0.28
TOP3B-214ENST00000457270 TSPYL1Q9H0U9 437 aa16.81■□□□□ 0.28
TOP3B-214ENST00000457270 MAP2P11137 1827 aaKnown RBP16.81■□□□□ 0.28
TOP3B-214ENST00000457270 SAFB2Q14151 953 aaKnown RBP eCLIP16.81■□□□□ 0.28
TOP3B-214ENST00000457270 ZSCAN25Q6NSZ9 544 aa16.81■□□□□ 0.28
TOP3B-214ENST00000457270 YTHDC2Q9H6S0 1430 aaKnown RBP16.81■□□□□ 0.28
TOP3B-214ENST00000457270 PLA2G4DQ86XP0 818 aa16.8■□□□□ 0.28
TOP3B-214ENST00000457270 AOX1Q06278 1338 aa16.8■□□□□ 0.28
TOP3B-214ENST00000457270 CHRM1P11229 460 aaPredicted RBP16.8■□□□□ 0.28
TOP3B-214ENST00000457270 SLFNL1Q499Z3 407 aa16.8■□□□□ 0.28
TOP3B-214ENST00000457270 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.8■□□□□ 0.28
TOP3B-214ENST00000457270 MRVI1Q9Y6F6 885 aa16.8■□□□□ 0.28
TOP3B-214ENST00000457270 NAA30Q147X3 362 aaPredicted RBP16.8■□□□□ 0.28
TOP3B-214ENST00000457270 LRRCC1Q9C099 1032 aa16.8■□□□□ 0.28
TOP3B-214ENST00000457270 LIMCH1Q9UPQ0 1083 aa16.8■□□□□ 0.28
TOP3B-214ENST00000457270 CHD1O14646 1710 aa16.79■□□□□ 0.28
TOP3B-214ENST00000457270 LRMPQ12912 555 aa16.79■□□□□ 0.28
TOP3B-214ENST00000457270 SMC3Q9UQE7 1217 aa16.79■□□□□ 0.28
TOP3B-214ENST00000457270 MAP3K11Q16584 847 aa16.79■□□□□ 0.28
TOP3B-214ENST00000457270 KMT5BQ4FZB7 885 aa16.79■□□□□ 0.28
TOP3B-214ENST00000457270 HECW2Q9P2P5 1572 aa16.78■□□□□ 0.28
TOP3B-214ENST00000457270 ZNF75DP51815 510 aa16.78■□□□□ 0.28
TOP3B-214ENST00000457270 TYRO3Q06418 890 aa16.78■□□□□ 0.28
TOP3B-214ENST00000457270 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
TOP3B-214ENST00000457270 DNM1Q05193 864 aaKnown RBP16.78■□□□□ 0.28
TOP3B-214ENST00000457270 TSHZ3Q63HK5 1081 aa16.78■□□□□ 0.28
TOP3B-214ENST00000457270 CEP135Q66GS9 1140 aa16.78■□□□□ 0.28
TOP3B-214ENST00000457270 FAM83GA6ND36 823 aa16.77■□□□□ 0.28
TOP3B-214ENST00000457270 MTMR6Q9Y217 621 aa16.77■□□□□ 0.28
TOP3B-214ENST00000457270 CCDC171Q6TFL3 1326 aa16.77■□□□□ 0.28
TOP3B-214ENST00000457270 TPD52L1Q16890 204 aaPredicted RBP16.77■□□□□ 0.28
TOP3B-214ENST00000457270 RAD50Q92878 1312 aa16.77■□□□□ 0.27
TOP3B-214ENST00000457270 CDC25BP30305 580 aa16.77■□□□□ 0.27
TOP3B-214ENST00000457270 CCT4P50991 539 aaKnown RBP16.77■□□□□ 0.27
TOP3B-214ENST00000457270 AK2P54819 239 aa16.77■□□□□ 0.27
TOP3B-214ENST00000457270 RUFY3Q7L099 469 aa16.77■□□□□ 0.27
TOP3B-214ENST00000457270 LUZP1Q86V48 1076 aa16.77■□□□□ 0.27
TOP3B-214ENST00000457270 TDRD7Q8NHU6 1098 aaKnown RBP16.77■□□□□ 0.27
TOP3B-214ENST00000457270 ZBTB9Q96C00 473 aa16.77■□□□□ 0.27
TOP3B-214ENST00000457270 NUP62CLQ9H1M0 184 aa16.77■□□□□ 0.27
TOP3B-214ENST00000457270 TPRNQ4KMQ1 711 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 ELP1O95163 1332 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 PREX1Q8TCU6 1659 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 CHL1O00533 1208 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 TNNT3P45378 269 aaPredicted RBP16.76■□□□□ 0.27
TOP3B-214ENST00000457270 RTF1Q92541 710 aaKnown RBP16.76■□□□□ 0.27
TOP3B-214ENST00000457270 CBX8Q9HC52 389 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 NRBP1Q9UHY1 535 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 EXOC6BQ9Y2D4 811 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 SNX14Q9Y5W7 946 aa16.76■□□□□ 0.27
TOP3B-214ENST00000457270 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
TOP3B-214ENST00000457270 DRC7Q8IY82 874 aa16.75■□□□□ 0.27
TOP3B-214ENST00000457270 ERO1AQ96HE7 468 aa16.75■□□□□ 0.27
TOP3B-214ENST00000457270 ATP7BP35670 1465 aa16.75■□□□□ 0.27
TOP3B-214ENST00000457270 GNAI2P04899 355 aa16.75■□□□□ 0.27
TOP3B-214ENST00000457270 KIF1BPQ96EK5 621 aa16.75■□□□□ 0.27
TOP3B-214ENST00000457270 RBM6P78332 1123 aaKnown RBP16.74■□□□□ 0.27
TOP3B-214ENST00000457270 RBM43Q6ZSC3 357 aaKnown RBP16.74■□□□□ 0.27
TOP3B-214ENST00000457270 IL25Q9H293 177 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 MINK1Q8N4C8 1332 aaPredicted RBP16.74■□□□□ 0.27
TOP3B-214ENST00000457270 AATKQ6ZMQ8 1374 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.74■□□□□ 0.27
TOP3B-214ENST00000457270 NEMFO60524 1076 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 NYAP1Q6ZVC0 841 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 UNC5CLQ8IV45 518 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 CACTINQ8WUQ7 758 aaKnown RBP16.74■□□□□ 0.27
TOP3B-214ENST00000457270 TRIM5Q9C035 493 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 FBLN1P23142 703 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 CABP1Q9NZU7 370 aa16.74■□□□□ 0.27
TOP3B-214ENST00000457270 FEZ2Q9UHY8 353 aaPredicted RBP16.74■□□□□ 0.27
TOP3B-214ENST00000457270 ZNF215Q9UL58 517 aaPredicted RBP16.74■□□□□ 0.27
TOP3B-214ENST00000457270 GJB2P29033 226 aa16.73■□□□□ 0.27
TOP3B-214ENST00000457270 ANO6Q4KMQ2 910 aa16.73■□□□□ 0.27
TOP3B-214ENST00000457270 FBXO38Q6PIJ6 1188 aa16.73■□□□□ 0.27
TOP3B-214ENST00000457270 EMILIN1Q9Y6C2 1016 aa16.73■□□□□ 0.27
TOP3B-214ENST00000457270 STK26Q9P289 416 aa16.72■□□□□ 0.27
TOP3B-214ENST00000457270 SIGLEC1Q9BZZ2 1709 aa16.72■□□□□ 0.27
TOP3B-214ENST00000457270 SGSM2O43147 1006 aa16.72■□□□□ 0.27
TOP3B-214ENST00000457270 PRAM1Q96QH2 718 aa16.72■□□□□ 0.27
TOP3B-214ENST00000457270 CLIP2Q9UDT6 1046 aa16.72■□□□□ 0.27
TOP3B-214ENST00000457270 CAVIN2O95810 425 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 CYP2C19P33261 490 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 NUTM2DQ5VT03 806 aaPredicted RBP16.71■□□□□ 0.27
TOP3B-214ENST00000457270 ZSCAN31Q96LW9 406 aaPredicted RBP16.71■□□□□ 0.27
TOP3B-214ENST00000457270 CDK19Q9BWU1 502 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 SH2B1Q9NRF2 756 aaPredicted RBP16.71■□□□□ 0.27
TOP3B-214ENST00000457270 KCND1Q9NSA2 647 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 KRT85P78386 507 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 TTC6Q86TZ1 520 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 LSG1Q9H089 658 aaKnown RBP16.71■□□□□ 0.27
TOP3B-214ENST00000457270 TNMDQ9H2S6 317 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 HYPKQ9NX55 129 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 ARHGEF10O15013 1369 aa16.71■□□□□ 0.27
TOP3B-214ENST00000457270 SLC4A2P04920 1241 aa16.71■□□□□ 0.26
TOP3B-214ENST00000457270 ATP8B2P98198 1209 aa16.71■□□□□ 0.26
TOP3B-214ENST00000457270 PTPN14Q15678 1187 aa16.71■□□□□ 0.26
TOP3B-214ENST00000457270 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.26
TOP3B-214ENST00000457270 DDX19AQ9NUU7 478 aaKnown RBP16.71■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms